Clone GH22722 Report

Search the DGRC for GH22722

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:227
Well:22
Vector:pOT2
Associated Gene/TranscriptCG8596-RA
Protein status:GH22722.pep: gold
Preliminary Size:1936
Sequenced Size:1894

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8596 2001-01-01 Release 2 assignment
CG8596 2001-11-08 Blastp of sequenced clone
CG8596 2003-01-01 Sim4 clustering to Release 3
CG8596 2008-04-29 Release 5.5 accounting
CG8596 2008-08-15 Release 5.9 accounting
CG8596 2008-12-18 5.12 accounting

Clone Sequence Records

GH22722.complete Sequence

1894 bp (1894 high quality bases) assembled on 2001-11-08

GenBank Submission: AY069179

> GH22722.complete
TTCGTTCATCTCCAGTGGTCGTCGCTGTTCCGCTGCAACAGAATGACTCA
GTGGCGGTGAAATCCAGCAAACACACATCCATCGCAGCCAACCAACCCAT
CAAACATCACAGCCAAGCAAACCAATTATGGAGTTTGCCCGCCGAGTTTC
CGCTCGCTTTGAAACCAAAAGACTGCCGGAGGATGTGGACGATGGCCTGG
AGACGCTGGAGGAGTACAAGCAGCGCTGGCGCTCCGTCCGCATCATCTAC
TTTACGATGTTTCTGATGGCGCTTGGCTTCAGCATCATACTCACAGGCAT
TTGGCCCTACCTCAACAAGCTAGATCCCGATGCGGGCAAGGAGTTTATGG
GACTGATTGTGGCCGCCAATCCGCTGGGACAAATGATCTTCAGTCCGATC
TTTGGGTGGTGGGGCAACAAGCTGGGCAAGATTCGTCTGCCACTGCTGCT
ATCGCTGTCTCTATTCACGCTGGCCAGTGGCATATACTCCTCGCTGGAAC
TGCGTCCGGACAATGTGAAGTACTGGATGCTCTCCTCGCGGTTCCTCATC
GGTGTCAGCTCGGCGAATATTGCCCTGTGCCGCTCCTATTTGTCCGCTGC
GACACGAATCAGCGAACGCACACATGCCGTTGCAATGGTTTCGCTGGCAC
AGGTCCTTGGATTCATCATTGGTCCAACTCTGCAGGCGGCAGTCACACCG
CTGGGAGATCAGGGACACGTCTGGCTGTGGGGCAAGATGCACTTCAACAT
GTACACGGCATCCGGATGGATCAATGTGCTGATGAGCATTGGAAACTTCA
TGATGTTCCTGCCCGGAGTGTTTGAGGAGCACAAAATTGCAGCTCGCGAG
GTGATGGTGATGCAGGGCGGCACATCCGAGAAGGAGACTTGGAAAGGCAT
CAAGCCCAGCTATTTATCCGCATGGACTTTGATCGTCGCCTTCTTTGTTC
TGGTATTCAACTTTGTGCTGTTGGAGACTCTGGGCACATCCCTGACAATG
GATATGTTCGCTTGGTCCAACGACGAGGCCCTATGGTACATGGGCATCAT
GATGACCACCGCAGCTATTGTCTCCCTGGTCACGTTCGTTTTGATTGAGC
CCATGTGCAAGATTATAGCCGAGCGTTATGTGCTCATCTGGGGCGGATTC
TCGCTGATGTTTCTCGGTCGCGTGCTCTTCGTGCCTTGGGGTCCGGATCC
GCCAAAGTTGGCGCAGCCATTCAATGCCAGCTGGAACCTAAGCGAAAGCG
ATCCCATCTTCTTGGGCTGCCCCACAACGCAGAAATGGTGCGGCGAACTG
CCGGCCTTGACCTTAACGCAGTTCATCATTGGATTTGCCTTCACATCGAT
AGGATATCCCATTGGGGTGACTCTCATCCAGACCATATTCTCCAAAGTTC
TGGGACCTCGGCCGCAGGGCGTCTGGATGGGCTGGATGACCGGTTCGGGT
TGTCTGTCCCGCGTCCTTGGTCCAGTCTTCGTGGGATCCATCTACACGCG
CCTAGGTACGTTCTGGACCTTCGGCGTTACTTCGGCCATGATGCTGGTCT
CCATGTTTTGGCTACAGTGCAGCAATCGATTACTAATCCCGCCAACATTC
GAAAAGACCACACCTGTCGAGCTGAAAGAACTGAACAAGCACAATGGTAG
CAAGCTGCTGGACGACCACTCACCGGACACGCACAATGGTAGCCCACCGG
AAGATCTGTCTCCTGATCAGCCCATTTTGGGCAAGCACGGCAGCCAGCAC
TCGATTTCACATGCGTAACGACGGCTGGCTATGGAGCATCCGTAGATCTA
AGACACATCGTTGCAATACTGCCCCTTAAACTAGCTTTAAAATACAGTGT
TTATTTTTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH22722.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG8596-RA 1913 CG8596-RA 51..1913 1..1863 9315 100 Plus
lark-RB 1851 lark-RB 1793..1851 1863..1805 295 100 Minus
lark-RA 1903 lark-RA 1845..1903 1863..1805 295 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7334369..7334965 1575..979 2940 99.5 Minus
chr3L 24539361 chr3L 7335234..7335743 827..318 2535 99.8 Minus
chr3L 24539361 chr3L 7334017..7334303 1862..1576 1435 100 Minus
chr3L 24539361 chr3L 7335799..7336080 319..38 1410 100 Minus
chr3L 24539361 chr3L 7335023..7335176 978..825 740 98.7 Minus
chr3L 24539361 chr3L 7337262..7337302 41..1 205 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:03:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7342236..7342832 1575..979 2985 100 Minus
3L 28110227 3L 7343103..7343612 827..318 2550 100 Minus
3L 28110227 3L 7341883..7342170 1863..1576 1440 100 Minus
3L 28110227 3L 7343668..7343949 319..38 1410 100 Minus
3L 28110227 3L 7342892..7343045 978..825 770 100 Minus
3L 28110227 3L 7345130..7345170 41..1 205 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7335336..7335932 1575..979 2985 100 Minus
3L 28103327 3L 7336203..7336712 827..318 2550 100 Minus
3L 28103327 3L 7334983..7335270 1863..1576 1440 100 Minus
3L 28103327 3L 7336768..7337049 319..38 1410 100 Minus
3L 28103327 3L 7335992..7336145 978..825 770 100 Minus
3L 28103327 3L 7338230..7338270 41..1 205 100 Minus
Blast to na_te.dros performed on 2019-03-16 17:59:44 has no hits.

GH22722.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:00:41 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7335799..7336076 42..319 100 <- Minus
chr3L 7337262..7337302 1..41 100   Minus
chr3L 7334017..7334303 1576..1862 100 <- Minus
chr3L 7334369..7334965 979..1575 99 <- Minus
chr3L 7335023..7335174 827..978 98 <- Minus
chr3L 7335235..7335741 320..826 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:52:43 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 1..1641 128..1768 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:34:28 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 1..1641 128..1768 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:06:07 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 1..1641 128..1768 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:02:01 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 1..1641 128..1768 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:25:44 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 1..1641 128..1768 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:14:03 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 12..1873 1..1862 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:34:28 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 12..1873 1..1862 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:06:07 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 14..1875 1..1862 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:02:02 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 12..1873 1..1862 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:25:44 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG8596-RA 14..1875 1..1862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:00:41 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7341884..7342170 1576..1862 100 <- Minus
3L 7342236..7342832 979..1575 100 <- Minus
3L 7342892..7343043 827..978 100 <- Minus
3L 7343104..7343610 320..826 100 <- Minus
3L 7343668..7343945 42..319 100 <- Minus
3L 7345130..7345170 1..41 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:00:41 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7341884..7342170 1576..1862 100 <- Minus
3L 7342236..7342832 979..1575 100 <- Minus
3L 7342892..7343043 827..978 100 <- Minus
3L 7343104..7343610 320..826 100 <- Minus
3L 7343668..7343945 42..319 100 <- Minus
3L 7345130..7345170 1..41 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:00:41 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7341884..7342170 1576..1862 100 <- Minus
3L 7342236..7342832 979..1575 100 <- Minus
3L 7342892..7343043 827..978 100 <- Minus
3L 7343104..7343610 320..826 100 <- Minus
3L 7343668..7343945 42..319 100 <- Minus
3L 7345130..7345170 1..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:07 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7335992..7336143 827..978 100 <- Minus
arm_3L 7334984..7335270 1576..1862 100 <- Minus
arm_3L 7335336..7335932 979..1575 100 <- Minus
arm_3L 7336204..7336710 320..826 100 <- Minus
arm_3L 7336768..7337045 42..319 100 <- Minus
arm_3L 7338230..7338270 1..41 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:39:01 Download gff for GH22722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7334984..7335270 1576..1862 100 <- Minus
3L 7335336..7335932 979..1575 100 <- Minus
3L 7335992..7336143 827..978 100 <- Minus
3L 7336204..7336710 320..826 100 <- Minus
3L 7336768..7337045 42..319 100 <- Minus
3L 7338230..7338270 1..41 100   Minus

GH22722.pep Sequence

Translation from 127 to 1767

> GH22722.pep
MEFARRVSARFETKRLPEDVDDGLETLEEYKQRWRSVRIIYFTMFLMALG
FSIILTGIWPYLNKLDPDAGKEFMGLIVAANPLGQMIFSPIFGWWGNKLG
KIRLPLLLSLSLFTLASGIYSSLELRPDNVKYWMLSSRFLIGVSSANIAL
CRSYLSAATRISERTHAVAMVSLAQVLGFIIGPTLQAAVTPLGDQGHVWL
WGKMHFNMYTASGWINVLMSIGNFMMFLPGVFEEHKIAAREVMVMQGGTS
EKETWKGIKPSYLSAWTLIVAFFVLVFNFVLLETLGTSLTMDMFAWSNDE
ALWYMGIMMTTAAIVSLVTFVLIEPMCKIIAERYVLIWGGFSLMFLGRVL
FVPWGPDPPKLAQPFNASWNLSESDPIFLGCPTTQKWCGELPALTLTQFI
IGFAFTSIGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGPV
FVGSIYTRLGTFWTFGVTSAMMLVSMFWLQCSNRLLIPPTFEKTTPVELK
ELNKHNGSKLLDDHSPDTHNGSPPEDLSPDQPILGKHGSQHSISHA*

GH22722.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25123-PA 524 GF25123-PA 1..518 1..520 2442 88.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14976-PA 519 GG14976-PA 1..518 1..518 2656 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:28:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16093-PA 535 GH16093-PA 1..507 1..509 2125 80.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:08
Subject Length Description Subject Range Query Range Score Percent Strand
Cln7-PC 546 CG8596-PC 1..546 1..546 2892 100 Plus
Cln7-PB 546 CG8596-PB 1..546 1..546 2892 100 Plus
Cln7-PA 546 CG8596-PA 1..546 1..546 2892 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:28:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12356-PA 400 GI12356-PA 1..383 134..520 1614 78.6 Plus
Dmoj\GI16948-PA 79 GI16948-PA 1..75 1..76 221 57.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21121-PA 497 GL21121-PA 1..485 1..517 2105 80.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28324-PA 528 GA28324-PA 1..516 1..517 2339 86.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:28:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13772-PA 543 GM13772-PA 1..543 1..546 2835 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13069-PA 546 GD13069-PA 1..546 1..546 2861 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12248-PA 572 GJ12248-PA 33..553 1..526 2149 79.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16668-PA 536 GK16668-PA 6..529 5..529 2291 82.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20423-PA 545 GE20423-PA 1..545 1..546 2811 97.8 Plus

GH22722.hyp Sequence

Translation from 127 to 1767

> GH22722.hyp
MEFARRVSARFETKRLPEDVDDGLETLEEYKQRWRSVRIIYFTMFLMALG
FSIILTGIWPYLNKLDPDAGKEFMGLIVAANPLGQMIFSPIFGWWGNKLG
KIRLPLLLSLSLFTLASGIYSSLELRPDNVKYWMLSSRFLIGVSSANIAL
CRSYLSAATRISERTHAVAMVSLAQVLGFIIGPTLQAAVTPLGDQGHVWL
WGKMHFNMYTASGWINVLMSIGNFMMFLPGVFEEHKIAAREVMVMQGGTS
EKETWKGIKPSYLSAWTLIVAFFVLVFNFVLLETLGTSLTMDMFAWSNDE
ALWYMGIMMTTAAIVSLVTFVLIEPMCKIIAERYVLIWGGFSLMFLGRVL
FVPWGPDPPKLAQPFNASWNLSESDPIFLGCPTTQKWCGELPALTLTQFI
IGFAFTSIGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGPV
FVGSIYTRLGTFWTFGVTSAMMLVSMFWLQCSNRLLIPPTFEKTTPVELK
ELNKHNGSKLLDDHSPDTHNGSPPEDLSPDQPILGKHGSQHSISHA*

GH22722.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8596-PC 546 CG8596-PC 1..546 1..546 2892 100 Plus
CG8596-PB 546 CG8596-PB 1..546 1..546 2892 100 Plus
CG8596-PA 546 CG8596-PA 1..546 1..546 2892 100 Plus