Clone GH22843 Report

Search the DGRC for GH22843

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:228
Well:43
Vector:pOT2
Associated Gene/TranscriptnAChRalpha2-RA
Protein status:GH22843.pep: gold
Preliminary Size:2248
Sequenced Size:2393

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6844 2001-01-01 Release 2 assignment
CG6844 2001-09-19 Blastp of sequenced clone
CG6844 2003-01-01 Sim4 clustering to Release 3
nAcRalpha-96Ab 2008-04-29 Release 5.5 accounting
nAcRalpha-96Ab 2008-08-15 Release 5.9 accounting
nAcRalpha-96Ab 2008-12-18 5.12 accounting

Clone Sequence Records

GH22843.complete Sequence

2393 bp (2393 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058446

> GH22843.complete
TGAATATCTATGCAGGACAGCACGGAGCGGGGCCCAAAGGCTTGTTGAAA
TCAAGTGAAAGTCCGCTTAAAACTGCACACAAAAATATTGAAAAATCAGT
TAACAAGTTTGAATATTTTTTAGAATTTTTTAAGCACGAAATTGAGTTGG
TGAAAATTAAAAAGACTTTTTAAATAAAATAAGGCGGCCGGAGCAAAAAC
AAAATCAGCTGCCTGGACGCAGCGACTTCAGCTGCTCAAGCAGTGCGCCG
AATCGGGAATCAGTTAGCAGCAGCGAGACTTGGAGACTTGTAAACACTTT
TAGGCCATGTGCTAAAAGCCAGTTACTCGCTCTGCCCCACGAACTGCGTC
AGAGATTGAGCATCAAGGGGCAGCCAAGCACCCAAGGCGGGCAGAAAGGT
AAACAAAAACCTGTGCGCGTGTTTTGTGCATCAATAAAACACCGGCACAC
CGCCCACGCCGCACAGCGTCAAGGTCCTTTTTTTCTTTCCGTCGTGACGT
CGTCACCATGGCTCCTGGCTGCTGCACCACACGACCCCGCCCCATCGCCC
TGCTCGCTCACATCTGGCGCCACTGCAAGCCACTCTGCCTGCTCCTGGTG
CTCCTGCTCCTCTGCGAAACCGTTCAGGCGAATCCCGATGCCAAGCGACT
CTATGACGATCTGCTAAGCAACTACAATCGCCTCATCCGCCCTGTGAGCA
ATAATACGGACACGGTGTTGGTCAAATTGGGCCTACGGCTCTCCCAACTC
ATCGATTTGAATCTCAAAGATCAAATTCTAACCACCAACGTGTGGCTGGA
GCACGAATGGCAGGATCATAAATTCAAGTGGGATCCCTCGGAGTATGGCG
GCGTCACAGAGCTTTATGTGCCATCCGAGCACATCTGGCTGCCCGACATC
GTGCTCTACAACAATGCCGATGGCGAGTACGTGGTCACCACCATGACGAA
GGCCATCCTCCACTATACCGGCAAAGTGGTCTGGACTCCGCCGGCCATCT
TCAAGTCCAGCTGTGAGATTGATGTGCGCTACTTTCCCTTCGATCAGCAG
ACCTGCTTCATGAAGTTCGGCTCGTGGACCTACGACGGTGATCAGATCGA
TTTGAAGCACATCAGCCAGAAAAACGACAAGGACAACAAGGTGGAGATAG
GCATCGACCTGCGTGAGTACTATCCCAGTGTGGAGTGGGACATTCTCGGC
GTTCCGGCTGAGCGGCACGAGAAGTACTATCCCTGCTGTGCCGAACCGTA
TCCGGATATCTTCTTCAACATCACCCTGAGGCGAAAGACTCTCTTCTACA
CGGTTAACCTGATTATTCCATGTGTGGGCATCTCGTATCTTTCGGTGCTG
GTCTTTTACCTGCCCGCCGATTCTGGCGAGAAGATTGCTCTGTGCATCAG
CATCCTGCTGTCGCAAACCATGTTCTTCCTGCTCATATCGGAGATTATAC
CATCGACTTCACTGGCATTGCCGCTACTGGGAAAATATCTACTGTTCACC
ATGTTGCTGGTTGGCCTGAGTGTTGTCATCACGATTATCATACTAAACAT
ACACTACCGGAAGCCGAGTACGCACAAGATGCGACCCTGGATTAGGTCCT
TCTTCATCAAGAGATTGCCGAAACTCCTGCTGATGCGTGTGCCCAAGGAC
CTGCTGCGTGACCTGGCGGCCAACAAGATCAACTACGGCCTCAAGTTCAG
CAAGACCAAGTTCGGACAGGCGCTGATGGACGAGATGCAAATGAACTCGG
GCGGCTCCAGTCCAGACTCCCTGCGGCGGATGCAAGGTCGTGTGGGTGCT
GGTGGGTGCAATGGCATGCACGTGACCACGGCCACAAACAGATTCAGCGG
CTTGGTGGGGGCTTTGGGCGGCGGACTGAGCACCCTGAGCGGCTACAACG
GACTGCCATCGGTGCTATCCGGATTGGACGACTCTTTGAGCGATGTGGCC
GCACGCAAAAAGTATCCTTTCGAGCTGGAAAAGGCCATCCACAACGTCAT
GTTCATACAGCACCACATGCAGCGGCAGGACGAGTTCAATGCGGAAGATC
AGGACTGGGGCTTTGTGGCCATGGTCATGGATCGCCTATTCCTCTGGCTC
TTTATGATCGCATCCTTGGTGGGCACATTTGTGATCCTAGGCGAGGCTCC
GTCGCTATATGACGATACCAAGGCCATTGATGTTCAGCTATCCGATGTTG
CCAAGCAAATCTACAATCTAACCGAGAAGAAGAATTAAATTCATGAGAAC
GTAGGCTTAAGAAAATTTTCCTAGTTTAATGCAGTGTTTCAGCAAATTGA
TGCGAATGAAAATTAAAATACGCTATAATAAAAACGTTGGCCCCAAAAGC
AGCCAAGCAAAATGCTGAAATGCAAAAAAAAAAAAAAAAAAAA

GH22843.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
nAcRalpha-96Ab-RA 2427 nAcRalpha-96Ab-RA 33..2408 1..2376 11880 100 Plus
nAcRalpha-96Ab-RB 2359 nAcRalpha-96Ab-RB 429..2340 465..2376 9560 100 Plus
nAcRalpha-96Ab.a 2261 nAcRalpha-96Ab.a 347..2258 465..2376 9560 100 Plus
nAcRalpha-96Ab-RB 2359 nAcRalpha-96Ab-RB 33..430 1..398 1990 100 Plus
nAcRalpha-96Ab.a 2261 nAcRalpha-96Ab.a 74..348 124..398 1375 100 Plus
nAcRalpha-96Ab.a 2261 nAcRalpha-96Ab.a 14..73 1..60 300 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20308706..20309464 1..759 3795 100 Plus
chr3R 27901430 chr3R 20312057..20312643 1255..1841 2935 100 Plus
chr3R 27901430 chr3R 20314098..20314428 2043..2373 1640 99.7 Plus
chr3R 27901430 chr3R 20312872..20313078 1838..2044 1035 100 Plus
chr3R 27901430 chr3R 20310700..20310880 915..1095 905 100 Plus
chr3R 27901430 chr3R 20311726..20311888 1093..1255 815 100 Plus
chr3R 27901430 chr3R 20310407..20310562 759..914 780 100 Plus
chr3R 27901430 chr3R 20228348..20228709 1511..1150 565 77.1 Minus
chr3R 27901430 chr3R 20230659..20230778 1089..970 270 81.7 Minus
chrX 22417052 chrX 8198785..8198961 914..738 240 75.7 Minus
chr3R 27901430 chr3R 20245084..20245168 711..627 230 84.7 Minus
chr3L 24539361 chr3L 4433103..4433177 1021..1095 225 86.7 Plus
chrX 22417052 chrX 8184050..8184165 1332..1217 190 77.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:03:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24485442..24486200 1..759 3795 100 Plus
3R 32079331 3R 24488780..24489366 1255..1841 2935 100 Plus
3R 32079331 3R 24490817..24491150 2043..2376 1670 100 Plus
3R 32079331 3R 24489595..24489801 1838..2044 1035 100 Plus
3R 32079331 3R 24487423..24487603 915..1095 905 100 Plus
3R 32079331 3R 24488449..24488611 1093..1255 815 100 Plus
3R 32079331 3R 24487130..24487285 759..914 780 100 Plus
3R 32079331 3R 24405017..24405378 1511..1150 580 77.3 Minus
3R 32079331 3R 24407324..24407443 1089..970 270 81.7 Minus
X 23542271 X 8307006..8307182 914..738 240 75.7 Minus
3R 32079331 3R 24421743..24421827 711..627 230 84.7 Minus
3L 28110227 3L 4433721..4433795 1021..1095 225 86.7 Plus
X 23542271 X 8292301..8292416 1332..1217 190 77.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24226273..24227031 1..759 3795 100 Plus
3R 31820162 3R 24229611..24230197 1255..1841 2935 100 Plus
3R 31820162 3R 24231648..24231981 2043..2376 1670 100 Plus
3R 31820162 3R 24230426..24230632 1838..2044 1035 100 Plus
3R 31820162 3R 24228254..24228434 915..1095 905 100 Plus
3R 31820162 3R 24229280..24229442 1093..1255 815 100 Plus
3R 31820162 3R 24227961..24228116 759..914 780 100 Plus
3R 31820162 3R 24145848..24146179 1511..1180 565 78 Minus
3R 31820162 3R 24148155..24148274 1089..970 270 81.6 Minus
3R 31820162 3R 24162574..24162658 711..627 230 84.7 Minus
3L 28103327 3L 4433721..4433795 1021..1095 225 86.6 Plus
X 23527363 X 8315104..8315194 914..824 215 82.4 Minus
X 23527363 X 8300399..8300514 1332..1217 190 77.5 Minus
X 23527363 X 8314753..8314808 1085..1030 175 87.5 Minus
Blast to na_te.dros performed 2019-03-17 00:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy11 4428 gypsy11 GYPSY11 4428bp 1603..1725 65..182 152 62.9 Plus
X-element 4740 X-element ROXELEMENT 4740bp 3732..3814 963..881 117 63.1 Minus

GH22843.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:04:16 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20308706..20309464 1..759 100 -> Plus
chr3R 20310408..20310562 760..914 100 -> Plus
chr3R 20310700..20310880 915..1095 100 -> Plus
chr3R 20311729..20311888 1096..1255 100 -> Plus
chr3R 20312058..20312643 1256..1841 100 -> Plus
chr3R 20312876..20313077 1842..2043 100 -> Plus
chr3R 20314099..20314428 2044..2373 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:52:58 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RB 1..1731 508..2238 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:05:29 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RB 1..1731 508..2238 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:55:54 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RA 1..1731 508..2238 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:36:12 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RB 1..1731 508..2238 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:08:02 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAChRalpha2-RA 1..1731 508..2238 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:54:57 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:05:29 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:54 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RA 15..2387 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:36:12 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAcRalpha-96Ab-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:02 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
nAChRalpha2-RA 15..2387 1..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:04:16 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24485442..24486200 1..759 100 -> Plus
3R 24487131..24487285 760..914 100 -> Plus
3R 24487423..24487603 915..1095 100 -> Plus
3R 24488452..24488611 1096..1255 100 -> Plus
3R 24488781..24489366 1256..1841 100 -> Plus
3R 24489599..24489800 1842..2043 100 -> Plus
3R 24490818..24491147 2044..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:04:16 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24485442..24486200 1..759 100 -> Plus
3R 24487131..24487285 760..914 100 -> Plus
3R 24487423..24487603 915..1095 100 -> Plus
3R 24488452..24488611 1096..1255 100 -> Plus
3R 24488781..24489366 1256..1841 100 -> Plus
3R 24489599..24489800 1842..2043 100 -> Plus
3R 24490818..24491147 2044..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:04:16 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24485442..24486200 1..759 100 -> Plus
3R 24487131..24487285 760..914 100 -> Plus
3R 24487423..24487603 915..1095 100 -> Plus
3R 24488452..24488611 1096..1255 100 -> Plus
3R 24488781..24489366 1256..1841 100 -> Plus
3R 24489599..24489800 1842..2043 100 -> Plus
3R 24490818..24491147 2044..2373 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:54 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20316540..20316869 2044..2373 100   Plus
arm_3R 20311164..20311922 1..759 100 -> Plus
arm_3R 20312853..20313007 760..914 100 -> Plus
arm_3R 20313145..20313325 915..1095 100 -> Plus
arm_3R 20314174..20314333 1096..1255 100 -> Plus
arm_3R 20314503..20315088 1256..1841 100 -> Plus
arm_3R 20315321..20315522 1842..2043 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:13:16 Download gff for GH22843.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24226273..24227031 1..759 100 -> Plus
3R 24227962..24228116 760..914 100 -> Plus
3R 24228254..24228434 915..1095 100 -> Plus
3R 24229283..24229442 1096..1255 100 -> Plus
3R 24229612..24230197 1256..1841 100 -> Plus
3R 24230430..24230631 1842..2043 100 -> Plus
3R 24231649..24231978 2044..2373 100   Plus

GH22843.pep Sequence

Translation from 507 to 2237

> GH22843.pep
MAPGCCTTRPRPIALLAHIWRHCKPLCLLLVLLLLCETVQANPDAKRLYD
DLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHE
WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAI
LHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLK
HISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPD
IFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISIL
LSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHY
RKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGLKFSKT
KFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLV
GALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFI
QHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSL
YDDTKAIDVQLSDVAKQIYNLTEKKN*

GH22843.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20752-PA 567 GF20752-PA 5..567 14..576 2972 98.6 Plus
Dana\GF20712-PA 750 GF20712-PA 201..741 41..571 1573 57.5 Plus
Dana\GF20710-PA 519 GF20710-PA 7..500 26..564 1418 51.8 Plus
Dana\GF22443-PA 817 GF22443-PA 10..347 41..379 1282 68.4 Plus
Dana\GF25072-PA 521 GF25072-PA 10..507 26..552 967 42.5 Plus
Dana\GF22443-PA 817 GF22443-PA 728..805 489..566 198 46.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11295-PA 573 GG11295-PA 1..573 1..576 3035 99 Plus
Dere\GG12342-PA 574 GG12342-PA 21..565 41..571 1561 57 Plus
Dere\GG12341-PA 519 GG12341-PA 3..500 22..564 1421 51.6 Plus
Dere\GG17970-PA 799 GG17970-PA 10..359 29..379 1285 66.4 Plus
Dere\GG13154-PA 417 GG13154-PA 6..362 39..388 1219 62.3 Plus
Dere\GG17970-PA 799 GG17970-PA 710..787 489..566 198 46.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18824-PA 572 GH18824-PA 5..572 7..576 2921 96.7 Plus
Dgri\GH18787-PA 571 GH18787-PA 21..562 41..571 1575 56.4 Plus
Dgri\GH18785-PA 519 GH18785-PA 23..500 38..564 1399 51.9 Plus
Dgri\GH22330-PA 557 GH22330-PA 13..533 29..553 1379 49.6 Plus
Dgri\GH12410-PA 809 GH12410-PA 10..359 29..379 1286 66.4 Plus
Dgri\GH12410-PA 809 GH12410-PA 720..797 489..566 196 46.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
nAChRalpha2-PB 576 CG6844-PB 1..576 1..576 3042 100 Plus
nAChRalpha2-PA 576 CG6844-PA 1..576 1..576 3042 100 Plus
nAChRalpha1-PC 567 CG5610-PC 21..558 41..571 1578 57.7 Plus
nAChRalpha1-PB 597 CG5610-PB 21..558 41..571 1578 57.7 Plus
nAChRalpha1-PA 567 CG5610-PA 21..558 41..571 1578 57.7 Plus
nAChRbeta2-PA 519 CG6798-PA 3..500 22..564 1397 51.6 Plus
nAChRalpha4-PH 539 CG12414-PH 6..515 39..553 1347 51.1 Plus
nAChRalpha4-PC 539 CG12414-PC 6..515 39..553 1345 51.3 Plus
nAChRalpha3-PC 795 CG2302-PC 10..359 29..379 1305 66.4 Plus
nAChRalpha3-PB 795 CG2302-PB 10..359 29..379 1305 66.4 Plus
nAChRalpha4-PG 499 CG12414-PG 6..345 39..379 1232 63.9 Plus
nAChRbeta2-PB 304 CG6798-PB 3..277 22..293 995 65.2 Plus
nAChRbeta1-PA 521 CG11348-PA 10..507 26..552 990 42.2 Plus
nAChRalpha7-PF 560 CG32538-PF 15..555 3..548 948 39 Plus
nAChRalpha7-PD 560 CG32538-PD 15..555 3..548 948 39 Plus
nAChRalpha7-PA 560 CG32538-PA 15..555 3..548 948 39 Plus
nAChRalpha7-PE 564 CG32538-PE 15..555 3..548 948 39 Plus
nAChRalpha5-PH 808 CG32975-PH 291..805 18..550 919 38.8 Plus
nAChRalpha5-PD 808 CG32975-PD 291..805 18..550 919 38.8 Plus
nAChRalpha5-PB 808 CG32975-PB 291..805 18..550 919 38.8 Plus
nAChRalpha6-PH 494 CG4128-PH 11..491 26..550 889 37.9 Plus
nAChRalpha6-PA 494 CG4128-PA 11..491 26..550 888 37.9 Plus
nAChRalpha6-PG 494 CG4128-PG 11..491 26..550 882 37.5 Plus
nAChRalpha6-PB 494 CG4128-PB 11..491 26..550 882 37.5 Plus
nAChRalpha6-PC 494 CG4128-PC 11..491 26..550 881 37.5 Plus
nAChRalpha6-PD 509 CG4128-PD 11..506 26..550 863 36.9 Plus
nAChRalpha6-PE 523 CG4128-PE 11..520 26..550 852 36.1 Plus
nAChRalpha4-PE 384 CG12414-PE 9..360 197..553 735 44.3 Plus
nAChRalpha4-PF 371 CG12414-PF 8..347 210..553 721 45 Plus
nAChRalpha4-PD 371 CG12414-PD 8..347 210..553 721 45 Plus
nAChRbeta3-PA 441 CG11822-PA 53..344 47..359 336 27.3 Plus
nAChRalpha3-PC 795 CG2302-PC 706..782 489..565 190 46.8 Plus
nAChRalpha3-PB 795 CG2302-PB 706..782 489..565 190 46.8 Plus
nAChRalpha4-PG 499 CG12414-PG 411..475 489..553 162 46.2 Plus
CG8916-PC 510 CG8916-PC 9..299 48..350 162 18.7 Plus
CG8916-PB 612 CG8916-PB 111..401 48..350 162 18.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10081-PA 573 GI10081-PA 5..573 8..576 2944 97 Plus
Dmoj\GI22677-PA 570 GI22677-PA 21..561 41..571 1587 56.8 Plus
Dmoj\GI22676-PA 519 GI22676-PA 23..500 38..564 1389 51.4 Plus
Dmoj\GI23970-PA 557 GI23970-PA 13..533 29..553 1382 50.5 Plus
Dmoj\GI15865-PA 791 GI15865-PA 19..468 35..476 1283 56 Plus
Dmoj\GI15865-PA 791 GI15865-PA 702..779 489..566 197 46.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21867-PA 509 GL21867-PA 5..509 8..576 2532 85.4 Plus
Dper\GL21978-PA 574 GL21978-PA 21..565 41..571 1568 55.7 Plus
Dper\GL21977-PA 519 GL21977-PA 3..500 22..564 1427 51.8 Plus
Dper\GL19905-PA 594 GL19905-PA 26..582 41..566 1388 50.8 Plus
Dper\GL21880-PA 479 GL21880-PA 6..345 39..379 1230 63.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:51:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19901-PA 574 GA19901-PA 5..574 8..576 2956 96.8 Plus
Dpse\GA27331-PA 571 GA27331-PA 21..562 41..571 1572 56.6 Plus
Dpse\GA19869-PA 519 GA19869-PA 3..500 22..564 1429 51.8 Plus
Dpse\GA28361-PA 798 GA28361-PA 26..363 41..379 1280 68.4 Plus
Dpse\GA10937-PA 522 GA10937-PA 17..508 33..552 957 42.3 Plus
Dpse\GA28361-PA 798 GA28361-PA 709..786 489..566 196 46.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26601-PA 576 GM26601-PA 1..576 1..576 3088 100 Plus
Dsec\GM23483-PA 571 GM23483-PA 21..562 41..571 1564 57.4 Plus
Dsec\GM23481-PA 519 GM23481-PA 3..500 22..564 1418 51.6 Plus
Dsec\GM22494-PA 447 GM22494-PA 25..392 29..388 1227 61.2 Plus
Dsec\GM14660-PA 521 GM14660-PA 10..507 26..552 963 42.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21103-PA 576 GD21103-PA 1..576 1..576 3088 100 Plus
Dsim\GD18289-PA 572 GD18289-PA 21..563 41..571 1550 57.2 Plus
Dsim\GD18288-PA 519 GD18288-PA 3..500 22..564 1420 51.6 Plus
Dsim\GD23953-PA 546 GD23953-PA 52..543 46..550 919 39.6 Plus
Dsim\GD13845-PA 503 GD13845-PA 10..333 26..358 822 51.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23817-PA 573 GJ23817-PA 5..573 8..576 2958 97.7 Plus
Dvir\GJ23404-PA 733 GJ23404-PA 173..724 29..571 1577 55.6 Plus
Dvir\GJ23403-PA 519 GJ23403-PA 23..500 38..564 1392 51.4 Plus
Dvir\GJ19023-PA 808 GJ19023-PA 17..354 41..379 1281 68.4 Plus
Dvir\GJ12715-PA 521 GJ12715-PA 22..507 39..552 959 42.6 Plus
Dvir\GJ19023-PA 808 GJ19023-PA 719..796 489..566 197 46.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22341-PA 572 GK22341-PA 4..572 9..576 2964 97.5 Plus
Dwil\GK22821-PA 578 GK22821-PA 21..569 41..571 1565 56 Plus
Dwil\GK22820-PA 519 GK22820-PA 23..500 38..564 1421 52.8 Plus
Dwil\GK12171-PA 564 GK12171-PA 25..540 29..553 1390 51.8 Plus
Dwil\GK16312-PA 840 GK16312-PA 10..359 29..379 1285 66.4 Plus
Dwil\GK16312-PA 840 GK16312-PA 751..828 489..566 195 46.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23490-PA 570 GE23490-PA 1..570 1..576 3028 98.8 Plus
Dyak\GE10796-PA 570 GE10796-PA 21..561 41..571 1573 57.5 Plus
Dyak\GE10794-PA 519 GE10794-PA 3..500 22..564 1421 51.6 Plus
Dyak\GE17461-PA 802 GE17461-PA 10..359 29..379 1285 66.4 Plus
Dyak\GE21448-PA 521 GE21448-PA 10..507 26..552 966 42.4 Plus
Dyak\GE17461-PA 802 GE17461-PA 713..790 489..566 198 46.2 Plus

GH22843.hyp Sequence

Translation from 507 to 2237

> GH22843.hyp
MAPGCCTTRPRPIALLAHIWRHCKPLCLLLVLLLLCETVQANPDAKRLYD
DLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHE
WQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAI
LHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLK
HISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPD
IFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISIL
LSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHY
RKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGLKFSKT
KFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLV
GALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFI
QHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSL
YDDTKAIDVQLSDVAKQIYNLTEKKN*

GH22843.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
nAChRalpha2-PB 576 CG6844-PB 1..576 1..576 3042 100 Plus
nAChRalpha2-PA 576 CG6844-PA 1..576 1..576 3042 100 Plus
nAChRalpha1-PC 567 CG5610-PC 21..558 41..571 1578 57.7 Plus
nAChRalpha1-PA 567 CG5610-PA 21..558 41..571 1578 57.7 Plus
nAChRalpha1-PB 597 CG5610-PB 21..558 41..571 1578 57.7 Plus