BDGP Sequence Production Resources |
Search the DGRC for GH22889
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 228 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17843-RA |
Protein status: | GH22889.pep: gold |
Preliminary Size: | 1749 |
Sequenced Size: | 1807 |
Gene | Date | Evidence |
---|---|---|
CG17843 | 2001-01-01 | Release 2 assignment |
CG17843 | 2001-12-12 | Blastp of sequenced clone |
CG17843 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17843 | 2008-04-29 | Release 5.5 accounting |
CG17843 | 2008-08-15 | Release 5.9 accounting |
CG17843 | 2008-12-18 | 5.12 accounting |
1807 bp (1807 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070518
> GH22889.complete TGAGCACAGTGTGGAAATGATTCGGCTACTCAAGACGCTTCTTTATTGCC TGCTCCTCATCTCCCCTGCTGATGTGCTGGGCCGGCTTAATGCCAGAAAG TCGGCGAACGAGGCGAGTCTCTATAGCGATACAGACAATGTGATTATGTT GGACATCGAATCGCTGAGGCCAGCTCTAAACTTGAAGAACAGCAAGCTGG TTCAGTTCCTCAACAGCTTCTGCGGTGACTGTCATCGCTTCGCACCGGTC TTCAAGACCCTTTCCCGCGACCTCTACAAGTGGCGAAGAATTCTCCGGAT CTATGCCGTAGATTGTGCCCAGGAGAGAAATGCTCAACTCTGCAGGGAAT TCAATATCCGCCAGACGCCATCATTGCGATTCTTTGGTCCCGACATGAGG AAGAACGATGATGTTCTTGGAGCGGTAATCCCAGGCCAAGATCCCGAGTT CATTAGCTCAACACTGGCCGAATTGGTATCCCAAAATGACTATGGACCCG GCCAGCCAAACTTTCGTCCCCTAAAAGCAACAGACTATGAAATTTTCCAA GATCAAGATGGGGAAACTCCGATACAATTTGTGGCTCTTGTCCTTCAGCC AAAAAATTCAAAGATCGGCAGGGACACGCTGCTAGAACTGCTGCCATTCA AAGAGCTATCGGTGAGGATAATCGAAGATTCTCAGATATTTAACGAATTT GGACTGGGTCCCGACGACCAAAAACTGGCTATAGTTGATAGAAATGGAAC CGCCCAGTATCTTACACCATCTTCGGACTCCAGTGAAGCGTATGCCAGCA CTATTGGAGACTTCCTTAAGAACCGCAATATTCAGCCAGATCCACCACTA CCCATCGCTGTAGCCCCAAACTTTACTGAGTTTCTGGATCACCAAAATCA AGCGATACTAACTAAAGTGCTTACGCCACCACTGCAGGTCTATCGTGCCG ACTTGGAGCAGGCAATCGATAAACTGCTGCACATTGAGCTTCGTAAATGG GTCCTTTTGGAGGGTAATAGCCTGAATGCTCTTAAAAATATTATTAAGAT TTTCCGATACCTGAATCCATTGAACAAGGACGGAAAGCTATTGCTGACTG ACCTGGACAACTCGTTGAGCTCGAAGCAGAGTATAAAGGGAGCCGACTTT GGTGATTTGGTTGATTCGCTTGAAAATGGTCGAAGGGTGTTTAAGGCAAG GCGATACGTTGGCTGCATTGGATCGCGGCCATTACTGCGAAGCTTTACCT GCTCTATGTGGACACTGTTTCACCATTTGACCGTGGAGGCAGCTAAGCCA CCAAATTACTTTGAGGCGGGCTCAATACTGAAAACCTTTCATGGATTCGC CAAGTACTTCTTCGGCTGCACGGATTGCTCTGAACACTTTCAGCAGATGG CCATTCGTCGTAATCTGACTTCGGTGAAAACCCATGACGAGGAGATCCTC TGGCTGTGGGCAGCCCACAACGAAGTCAATGCACGCATTGCTGGAGACTC TACGGAGGATCCCAAGTTCCCGAAGATTCAGTTCCCCAGCGCGGAGAATT GCCCCACTTGCCGGTCAAATGACTCGGAGTGGAGAACAGATGAAGTTCTT AAGTATCTGAAACAGCTCTACGATATCAATAATGTAAGCTTTTATGGCCT TCCCACTCCACAGGGATACGATTAGCGATTTACTTTAAAATCTTTGACTA ATCTTAACACCTATTGCATGAACGAGTTTTGTGAACCAATTTTATTAAAT AAATTAAATATAAATAACATAGACAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17843-RA | 1800 | CG17843-RA | 25..1800 | 1..1776 | 8865 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17737462..17739235 | 1..1774 | 8570 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21913773..21915548 | 1..1776 | 8865 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21654604..21656379 | 1..1776 | 8865 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17737462..17739196 | 1..1735 | 98 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 1..1659 | 17..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 1..1659 | 17..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 1..1659 | 17..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 1..1659 | 17..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 1..1659 | 17..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 25..1798 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 25..1798 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 27..1800 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 25..1798 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17843-RA | 27..1800 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21913773..21915546 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21913773..21915546 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21913773..21915546 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17739495..17741268 | 1..1774 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21654604..21656377 | 1..1774 | 99 | Plus |
Translation from 0 to 1674
> GH22889.hyp EHSVEMIRLLKTLLYCLLLISPADVLGRLNARKSANEASLYSDTDNVIML DIESLRPALNLKNSKLVQFLNSFCGDCHRFAPVFKTLSRDLYKWRRILRI YAVDCAQERNAQLCREFNIRQTPSLRFFGPDMRKNDDVLGAVIPGQDPEF ISSTLAELVSQNDYGPGQPNFRPLKATDYEIFQDQDGETPIQFVALVLQP KNSKIGRDTLLELLPFKELSVRIIEDSQIFNEFGLGPDDQKLAIVDRNGT AQYLTPSSDSSEAYASTIGDFLKNRNIQPDPPLPIAVAPNFTEFLDHQNQ AILTKVLTPPLQVYRADLEQAIDKLLHIELRKWVLLEGNSLNALKNIIKI FRYLNPLNKDGKLLLTDLDNSLSSKQSIKGADFGDLVDSLENGRRVFKAR RYVGCIGSRPLLRSFTCSMWTLFHHLTVEAAKPPNYFEAGSILKTFHGFA KYFFGCTDCSEHFQQMAIRRNLTSVKTHDEEILWLWAAHNEVNARIAGDS TEDPKFPKIQFPSAENCPTCRSNDSEWRTDEVLKYLKQLYDINNVSFYGL PTPQGYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17843-PA | 552 | CG17843-PA | 1..552 | 6..557 | 2896 | 100 | Plus |
CG6690-PA | 562 | CG6690-PA | 10..540 | 14..546 | 995 | 39.8 | Plus |
CG31413-PA | 561 | CG31413-PA | 11..553 | 12..550 | 970 | 37.9 | Plus |
CG4670-PB | 637 | CG4670-PB | 44..570 | 40..550 | 865 | 35.8 | Plus |
CG4670-PA | 637 | CG4670-PA | 44..570 | 40..550 | 865 | 35.8 | Plus |
Translation from 16 to 1674
> GH22889.pep MIRLLKTLLYCLLLISPADVLGRLNARKSANEASLYSDTDNVIMLDIESL RPALNLKNSKLVQFLNSFCGDCHRFAPVFKTLSRDLYKWRRILRIYAVDC AQERNAQLCREFNIRQTPSLRFFGPDMRKNDDVLGAVIPGQDPEFISSTL AELVSQNDYGPGQPNFRPLKATDYEIFQDQDGETPIQFVALVLQPKNSKI GRDTLLELLPFKELSVRIIEDSQIFNEFGLGPDDQKLAIVDRNGTAQYLT PSSDSSEAYASTIGDFLKNRNIQPDPPLPIAVAPNFTEFLDHQNQAILTK VLTPPLQVYRADLEQAIDKLLHIELRKWVLLEGNSLNALKNIIKIFRYLN PLNKDGKLLLTDLDNSLSSKQSIKGADFGDLVDSLENGRRVFKARRYVGC IGSRPLLRSFTCSMWTLFHHLTVEAAKPPNYFEAGSILKTFHGFAKYFFG CTDCSEHFQQMAIRRNLTSVKTHDEEILWLWAAHNEVNARIAGDSTEDPK FPKIQFPSAENCPTCRSNDSEWRTDEVLKYLKQLYDINNVSFYGLPTPQG YD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18057-PA | 540 | GF18057-PA | 1..540 | 1..552 | 1662 | 56.7 | Plus |
Dana\GF18056-PA | 776 | GF18056-PA | 296..772 | 71..551 | 1131 | 45.8 | Plus |
Dana\GF11199-PA | 636 | GF11199-PA | 45..569 | 34..545 | 896 | 36 | Plus |
Dana\GF18055-PA | 561 | GF18055-PA | 73..561 | 59..552 | 798 | 35.3 | Plus |
Dana\GF18058-PA | 778 | GF18058-PA | 413..778 | 189..546 | 483 | 34.1 | Plus |
Dana\GF18056-PA | 776 | GF18056-PA | 5..256 | 293..541 | 425 | 36.8 | Plus |
Dana\GF18058-PA | 778 | GF18058-PA | 25..379 | 28..332 | 404 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11096-PA | 553 | GG11096-PA | 1..553 | 1..552 | 2515 | 86.5 | Plus |
Dere\GG11219-PA | 560 | GG11219-PA | 21..555 | 33..551 | 1069 | 40.5 | Plus |
Dere\GG11095-PA | 564 | GG11095-PA | 10..549 | 10..546 | 1069 | 41.8 | Plus |
Dere\GG22509-PA | 635 | GG22509-PA | 44..568 | 35..545 | 880 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20920-PA | 559 | GH20920-PA | 26..559 | 30..552 | 1222 | 47.2 | Plus |
Dgri\GH20280-PA | 643 | GH20280-PA | 46..579 | 34..549 | 937 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Qsox2-PA | 552 | CG17843-PA | 1..552 | 1..552 | 2896 | 100 | Plus |
Qsox3-PA | 562 | CG6690-PA | 10..540 | 9..541 | 995 | 39.8 | Plus |
Qsox4-PA | 561 | CG31413-PA | 11..553 | 7..545 | 970 | 37.9 | Plus |
Qsox1-PB | 637 | CG4670-PB | 44..570 | 35..545 | 865 | 35.8 | Plus |
Qsox1-PA | 637 | CG4670-PA | 44..570 | 35..545 | 865 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10722-PA | 545 | GI10722-PA | 17..545 | 29..552 | 1232 | 47.6 | Plus |
Dmoj\GI19451-PA | 646 | GI19451-PA | 11..578 | 5..545 | 960 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20935-PA | 542 | GL20935-PA | 1..538 | 1..544 | 1440 | 51.5 | Plus |
Dper\GL23804-PA | 554 | GL23804-PA | 22..553 | 18..551 | 1274 | 48.3 | Plus |
Dper\GL10907-PA | 638 | GL10907-PA | 43..571 | 34..545 | 913 | 37.3 | Plus |
Dper\GL23805-PA | 265 | GL23805-PA | 82..264 | 96..272 | 200 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27058-PA | 559 | GA27058-PA | 21..558 | 18..551 | 1444 | 52.1 | Plus |
Dpse\GA28634-PA | 548 | GA28634-PA | 1..544 | 1..544 | 1436 | 51.8 | Plus |
Dpse\GA18343-PA | 638 | GA18343-PA | 43..571 | 34..545 | 913 | 37.3 | Plus |
Dpse\GA27059-PA | 265 | GA27059-PA | 82..264 | 96..272 | 190 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26387-PA | 564 | GM26387-PA | 22..541 | 22..541 | 1014 | 41.6 | Plus |
Dsec\GM26521-PA | 561 | GM26521-PA | 11..555 | 7..547 | 986 | 37.2 | Plus |
Dsec\GM26712-PA | 561 | GM26712-PA | 11..555 | 7..547 | 986 | 37.2 | Plus |
Dsec\GM20295-PA | 636 | GM20295-PA | 43..569 | 34..545 | 891 | 36.2 | Plus |
Dsec\GM26388-PA | 174 | GM26388-PA | 1..171 | 1..171 | 813 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20911-PA | 552 | GD20911-PA | 1..552 | 1..552 | 2753 | 95.3 | Plus |
Dsim\GD20910-PA | 564 | GD20910-PA | 22..541 | 22..541 | 1027 | 42 | Plus |
Dsim\GD21029-PA | 561 | GD21029-PA | 11..555 | 7..547 | 993 | 37.6 | Plus |
Dsim\GD25776-PA | 636 | GD25776-PA | 43..569 | 34..545 | 902 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23137-PA | 548 | GJ23137-PA | 16..548 | 29..552 | 1228 | 47.2 | Plus |
Dvir\GJ21201-PA | 646 | GJ21201-PA | 15..578 | 8..545 | 967 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14087-PA | 645 | GK14087-PA | 44..577 | 34..545 | 877 | 35.5 | Plus |
Dwil\GK14235-PA | 232 | GK14235-PA | 8..212 | 31..230 | 404 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10256-PA | 554 | GE10256-PA | 1..554 | 1..552 | 2576 | 88.8 | Plus |
Dyak\GE10255-PA | 558 | GE10255-PA | 22..547 | 22..546 | 1097 | 42.9 | Plus |
Dyak\GE10385-PA | 571 | GE10385-PA | 8..555 | 8..551 | 1030 | 37.9 | Plus |
Dyak\GE13379-PA | 636 | GE13379-PA | 43..569 | 34..545 | 873 | 35.8 | Plus |