Clone GH22922 Report

Search the DGRC for GH22922

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:229
Well:22
Vector:pOT2
Associated Gene/TranscriptLapsyn-RA
Protein status:GH22922.pep: gold
Preliminary Size:1679
Sequenced Size:1633

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15658 2001-07-04 Blastp of sequenced clone
CG15658 2003-01-01 Sim4 clustering to Release 3
CG15658 2008-04-29 Release 5.5 accounting
CG15658 2008-08-15 Release 5.9 accounting
CG15658 2008-12-18 5.12 accounting

Clone Sequence Records

GH22922.complete Sequence

1633 bp (1633 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051578

> GH22922.complete
GTTGAATTGAACGGTTCCGGCCAACGTGCGCGCTCCGTAACGATTGCTAT
AACATTCTACGGCGTAATCATAACTAAAAAATATTGATAATATAACATAT
AAAGCTGTTTGAATATTACATATATATAAAATATATAAAGATCACAGAAA
ATCGAAGAATCCTAGAAGAGCATAGAGTGATGTGTGTGTAGTGAACTAAC
AAGAATCCTGCCATTTTACTAGGATTATCATCGCCGACTTTAAATGGGAT
TATACCTGAACACTTGAATTTCCCCAGCGAGCATGGAACTGCATTGGCAG
CTGCTGACGTTCATCGTGTGCCTCCAGTTGTTGCATTCCGCCGGATTCAT
CATTCAGTCGGAAGTGCGCAAGTGCACGTACGGCCATATCGATAAGCTGC
TCCGGATTCGTTGCTACGACTTGGACCTCAAGGAGGTGCCACAGAACCTC
AAGAGTTCGGTGGAGGTTCTGGATCTATCGCACAATCGCATCAGGAAGCT
GAAAACTAGCTCGTTTCAGCGATACACGGACATTAAGTTTCTGATGCTCT
ATGATAACATGATCTTATCGGTGGAGGTGGGAACCTTCGAGCCACTCACC
TCGCTCCAGGAAATTGATCTTTCGAATAATGGACTGACAACGATACCGCT
GGAGTTGTTCCAGCTGCCGCGACTGAGAAACCTATACATCGATAGCAATG
AGCTAACATCCCTCAATCTTCAGGCACTGGAGAAGCCCATTCGTGCTCCA
CTGGAGTACCTGAACGTGGCAGGTTGCGAGCTACAGGAGTTACCCGATCT
GGGCATACTTCCAAAACTCTGGCAACTGAATGCCTCGATGAATCCGCTGC
AGAACTTCAGGATCGACAGCCTGGCGAATATGTGCCACCTGCAGGTCATC
GATCTGACCAAGTCGCAGTTGAGCCAGTGTGGCTGCCAGCAGGTCACCAA
CCATCTTATGATGCTCGGCGCCAGTCCGAAGTTCGTGCCAGTTTGCTTGG
AGGCGCTCGACATCCGCGAGTGTCCACTGCCCTACAATCGAACGATCCAT
TCGCCAACATTCGCCAGTTGCCAGACGACACTGCAGTTTGCCGAAACGCG
CAGCTTCTGGCTCTTTGGAGCTGGCTGCTTTGGCGGAGTTTGTTTTGTGC
TTTTAATTGTCATCTTCTGCGTGATACACTGTAGGAGAAAACGAGCCCAG
CGACGAAAGAGGAATGCCCAGAAGCGAAAGCCGTTTGTGATCTCGCCCAG
AAACGCCATCAACAACCGTCAGCCGGAGGACGAGCCTCTGCACTGTGATA
TTGCCCGAAAATAGCACTTTAGTTAGTTAATTAGTTGCTTAGTTAGTTAG
TTAGTCTTAGGTGCCAGTTATTTATTACCTACCATTTATGCGTTAGTTTA
GCCTTAGGACAACCGTCTACCTAGCAAACTGCCTTGAATCCTTTACCAAA
AATCACACAAAATCACCAAAAACCAAAAACAGCGCCATCAAAGAATATTG
CCTTGCTCAAAAGCCATCGCTTATTTATTTGGTTTAATACGTAACATAGA
TTTAAGCCAGCAATGGAGTGGATTTTTTATAACGAATGACAATAAAACGT
TGATTTAAAGAAGAAAAAAAAAAAAAAAAAAAA

GH22922.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15658-RA 1712 CG15658-RA 16..1630 1..1615 8075 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17085410..17085865 1157..1612 2160 98.2 Plus
chr2R 21145070 chr2R 17080036..17080316 1..279 1325 98.9 Plus
chr2R 21145070 chr2R 17084662..17084870 606..814 970 97.6 Plus
chr2R 21145070 chr2R 17084043..17084231 279..467 930 99.5 Plus
chr2R 21145070 chr2R 17084928..17085113 815..1000 915 99.5 Plus
chr2R 21145070 chr2R 17085197..17085353 1000..1156 785 100 Plus
chr2R 21145070 chr2R 17084455..17084601 464..610 735 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:03:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198975..21199433 1157..1615 2295 100 Plus
2R 25286936 2R 21193588..21193866 1..279 1395 100 Plus
2R 25286936 2R 21198226..21198434 606..814 1045 100 Plus
2R 25286936 2R 21197607..21197795 279..467 945 100 Plus
2R 25286936 2R 21198492..21198677 815..1000 930 100 Plus
2R 25286936 2R 21198761..21198917 1000..1156 785 100 Plus
2R 25286936 2R 21198019..21198165 464..610 735 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21200174..21200632 1157..1615 2295 100 Plus
2R 25260384 2R 21194787..21195065 1..279 1395 100 Plus
2R 25260384 2R 21199425..21199633 606..814 1045 100 Plus
2R 25260384 2R 21198806..21198994 279..467 945 100 Plus
2R 25260384 2R 21199691..21199876 815..1000 930 100 Plus
2R 25260384 2R 21199960..21200116 1000..1156 785 100 Plus
2R 25260384 2R 21199218..21199364 464..610 735 100 Plus
Blast to na_te.dros performed on 2019-03-16 14:53:37 has no hits.

GH22922.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:54:33 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17085198..17085353 1001..1156 100 -> Plus
chr2R 17084044..17084229 280..465 99 -> Plus
chr2R 17084457..17084600 466..609 100 -> Plus
chr2R 17084666..17084870 610..814 97 -> Plus
chr2R 17084928..17085113 815..1000 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:53:06 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 1..1032 283..1314 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:59:48 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 1..1032 283..1314 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:02:16 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 1..1032 283..1314 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:43:44 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 1..1032 283..1314 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:34:38 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 1..1032 283..1314 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:15:02 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 16..1628 1..1613 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:59:48 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 16..1628 1..1613 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:16 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 18..1630 1..1613 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:43:44 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 16..1628 1..1613 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:34:38 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 18..1630 1..1613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:33 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21198230..21198434 610..814 100 -> Plus
2R 21198492..21198677 815..1000 100 -> Plus
2R 21198762..21198917 1001..1156 100 -> Plus
2R 21193588..21193866 1..279 100 -> Plus
2R 21197608..21197793 280..465 100 -> Plus
2R 21198021..21198164 466..609 100 -> Plus
2R 21198975..21199431 1157..1613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:33 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21198230..21198434 610..814 100 -> Plus
2R 21198492..21198677 815..1000 100 -> Plus
2R 21198762..21198917 1001..1156 100 -> Plus
2R 21193588..21193866 1..279 100 -> Plus
2R 21197608..21197793 280..465 100 -> Plus
2R 21198021..21198164 466..609 100 -> Plus
2R 21198975..21199431 1157..1613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:54:33 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21198230..21198434 610..814 100 -> Plus
2R 21198492..21198677 815..1000 100 -> Plus
2R 21198762..21198917 1001..1156 100 -> Plus
2R 21193588..21193866 1..279 100 -> Plus
2R 21197608..21197793 280..465 100 -> Plus
2R 21198021..21198164 466..609 100 -> Plus
2R 21198975..21199431 1157..1613 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:16 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085113..17085298 280..465 100 -> Plus
arm_2R 17085526..17085669 466..609 100 -> Plus
arm_2R 17081093..17081371 1..279 100 -> Plus
arm_2R 17085735..17085939 610..814 100 -> Plus
arm_2R 17085997..17086182 815..1000 100 -> Plus
arm_2R 17086267..17086422 1001..1156 100 -> Plus
arm_2R 17086480..17086936 1157..1613 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:26:36 Download gff for GH22922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21194787..21195065 1..279 100 -> Plus
2R 21198807..21198992 280..465 100 -> Plus
2R 21199220..21199363 466..609 100 -> Plus
2R 21199429..21199633 610..814 100 -> Plus
2R 21199691..21199876 815..1000 100 -> Plus
2R 21199961..21200116 1001..1156 100 -> Plus
2R 21200174..21200630 1157..1613 100   Plus

GH22922.pep Sequence

Translation from 282 to 1313

> GH22922.pep
MELHWQLLTFIVCLQLLHSAGFIIQSEVRKCTYGHIDKLLRIRCYDLDLK
EVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLYDNMILSVEVG
TFEPLTSLQEIDLSNNGLTTIPLELFQLPRLRNLYIDSNELTSLNLQALE
KPIRAPLEYLNVAGCELQELPDLGILPKLWQLNASMNPLQNFRIDSLANM
CHLQVIDLTKSQLSQCGCQQVTNHLMMLGASPKFVPVCLEALDIRECPLP
YNRTIHSPTFASCQTTLQFAETRSFWLFGAGCFGGVCFVLLIVIFCVIHC
RRKRAQRRKRNAQKRKPFVISPRNAINNRQPEDEPLHCDIARK*

GH22922.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12802-PA 338 GF12802-PA 1..337 1..342 1522 82.5 Plus
Dana\GF13339-PA 1502 GF13339-PA 79..253 40..189 164 29.4 Plus
Dana\GF15605-PA 1353 GF15605-PA 160..344 40..223 160 30.5 Plus
Dana\GF24034-PA 748 GF24034-PA 95..266 48..214 153 29.4 Plus
Dana\GF16594-PA 1276 GF16594-PA 508..665 58..212 152 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22099-PA 343 GG22099-PA 1..343 1..343 1683 94.8 Plus
Dere\GG10165-PA 1369 GG10165-PA 169..355 38..223 170 31.2 Plus
Dere\GG10236-PA 883 GG10236-PA 105..274 42..208 164 30.2 Plus
Dere\GG22325-PA 1504 GG22325-PA 82..256 40..189 163 29.4 Plus
Dere\GG11882-PA 1315 GG11882-PA 526..683 58..212 163 32.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21858-PA 346 GH21858-PA 1..344 1..341 1205 67.1 Plus
Dgri\GH20965-PA 1524 GH20965-PA 100..274 40..189 162 30.5 Plus
Dgri\GH15071-PA 1534 GH15071-PA 1..144 1..144 155 32 Plus
Dgri\GH10356-PA 903 GH10356-PA 114..243 42..170 154 32.6 Plus
Dgri\GH10603-PA 1333 GH10603-PA 139..323 40..223 151 29.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-PA 343 CG15658-PA 1..343 1..343 1802 100 Plus
sli-PB 1469 CG43758-PB 82..238 40..203 202 34.1 Plus
sli-PD 1480 CG43758-PD 82..238 40..203 202 34.1 Plus
sli-PA 1480 CG43758-PA 82..238 40..203 202 34.1 Plus
rk-PA 1360 CG8930-PA 159..345 38..223 183 30.7 Plus
chp-PC 1305 CG1744-PC 516..656 58..195 170 35 Plus
chp-PE 1308 CG1744-PE 519..659 58..195 170 35 Plus
chp-PF 1312 CG1744-PF 523..663 58..195 170 35 Plus
chp-PA 1315 CG1744-PA 526..666 58..195 170 35 Plus
chp-PD 1338 CG1744-PD 523..663 58..195 170 35 Plus
lbk-PB 1252 CG8434-PB 363..542 60..215 169 27.8 Plus
sli-PE 1504 CG43758-PE 82..262 40..203 167 29.8 Plus
sli-PC 1504 CG43758-PC 82..262 40..203 167 29.8 Plus
sli-PF 2157 CG43758-PF 82..262 40..203 167 29.8 Plus
kek4-PC 649 CG9431-PC 16..234 4..218 155 27.3 Plus
kek4-PB 649 CG9431-PB 16..234 4..218 155 27.3 Plus
kek4-PA 649 CG9431-PA 16..234 4..218 155 27.3 Plus
Pxn-PB 457 CG12002-PB 37..193 42..208 154 28.6 Plus
Pxn-PE 1527 CG12002-PE 37..193 42..208 154 28.6 Plus
Pxn-PD 1527 CG12002-PD 37..193 42..208 154 28.6 Plus
Pxn-PC 1527 CG12002-PC 37..193 42..208 154 28.6 Plus
Pxn-PA 1527 CG12002-PA 37..193 42..208 154 28.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20360-PA 346 GI20360-PA 10..344 8..341 1170 66.6 Plus
Dmoj\GI10434-PA 1339 GI10434-PA 550..707 58..212 160 33.1 Plus
Dmoj\GI21281-PA 904 GI21281-PA 116..245 42..170 158 32.6 Plus
Dmoj\GI21301-PA 1529 GI21301-PA 105..279 40..189 155 28.8 Plus
Dmoj\GI12839-PA 1572 GI12839-PA 41..143 42..144 152 36.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11327-PA 350 GL11327-PA 1..344 1..342 1365 77.5 Plus
Dper\GL10073-PA 817 GL10073-PA 81..250 42..208 166 30.2 Plus
Dper\GL16263-PA 1426 GL16263-PA 105..279 40..189 157 28.2 Plus
Dper\GL13952-PA 1315 GL13952-PA 526..683 58..212 156 33.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13876-PA 350 GA13876-PA 1..344 1..342 1365 77.5 Plus
Dpse\GA11531-PA 886 GA11531-PA 108..277 42..208 166 30.2 Plus
Dpse\GA30268-PB 1527 GA30268-PB 105..279 40..189 157 28.2 Plus
Dpse\GA21416-PA 1374 GA21416-PA 182..366 40..223 156 29.4 Plus
Dpse\GA14511-PA 1315 GA14511-PA 526..683 58..212 156 33.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15816-PA 343 GM15816-PA 1..343 1..343 1799 98.8 Plus
Dsec\GM14985-PA 1286 GM14985-PA 160..346 38..223 171 31.2 Plus
Dsec\GM25965-PA 880 GM25965-PA 105..274 42..208 164 30.2 Plus
Dsec\GM20113-PA 1506 GM20113-PA 84..258 40..189 164 29.4 Plus
Dsec\GM12100-PA 1315 GM12100-PA 526..683 58..212 163 32.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11575-PA 343 GD11575-PA 1..343 1..343 1809 99.1 Plus
Dsim\GD22022-PA 1358 GD22022-PA 158..344 38..223 171 31.2 Plus
Dsim\GD22095-PA 1442 GD22095-PA 105..274 42..208 165 30.2 Plus
Dsim\GD25590-PA 1506 GD25590-PA 84..258 40..189 164 29.4 Plus
Dsim\GD16557-PA 1315 GD16557-PA 526..683 58..212 163 32.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22085-PA 346 GJ22085-PA 1..344 1..341 1253 69.4 Plus
Dvir\GJ11119-PA 912 GJ11119-PA 121..290 42..208 157 30.2 Plus
Dvir\GJ20903-PA 1518 GJ20903-PA 94..268 40..189 157 29.4 Plus
Dvir\GJ10649-PA 1315 GJ10649-PA 526..683 58..212 155 32.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15793-PA 345 GK15793-PA 1..344 1..342 1262 70.7 Plus
Dwil\GK22554-PA 1315 GK22554-PA 526..683 58..212 160 32.5 Plus
Dwil\GK19542-PA 1514 GK19542-PA 92..266 40..189 154 29.4 Plus
Dwil\GK12503-PA 1540 GK12503-PA 44..201 43..210 153 30.8 Plus
Dwil\GK15106-PA 1268 GK15106-PA 79..263 40..223 152 30 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12179-PA 343 GE12179-PA 1..343 1..343 1700 96.5 Plus
Dyak\GE25192-PA 1364 GE25192-PA 164..350 38..223 170 31.2 Plus
Dyak\GE14122-PA 1507 GE14122-PA 85..259 40..189 167 29.4 Plus
Dyak\GE12011-PA 812 GE12011-PA 106..275 42..208 164 30.2 Plus
Dyak\chp-PA 1315 GE23330-PA 526..683 58..212 158 31.9 Plus

GH22922.hyp Sequence

Translation from 282 to 1313

> GH22922.hyp
MELHWQLLTFIVCLQLLHSAGFIIQSEVRKCTYGHIDKLLRIRCYDLDLK
EVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLYDNMILSVEVG
TFEPLTSLQEIDLSNNGLTTIPLELFQLPRLRNLYIDSNELTSLNLQALE
KPIRAPLEYLNVAGCELQELPDLGILPKLWQLNASMNPLQNFRIDSLANM
CHLQVIDLTKSQLSQCGCQQVTNHLMMLGASPKFVPVCLEALDIRECPLP
YNRTIHSPTFASCQTTLQFAETRSFWLFGAGCFGGVCFVLLIVIFCVIHC
RRKRAQRRKRNAQKRKPFVISPRNAINNRQPEDEPLHCDIARK*

GH22922.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 08:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-PA 343 CG15658-PA 1..343 1..343 1802 100 Plus
sli-PB 1469 CG43758-PB 82..238 40..203 202 34.1 Plus
sli-PD 1480 CG43758-PD 82..238 40..203 202 34.1 Plus
sli-PA 1480 CG43758-PA 82..238 40..203 202 34.1 Plus
rk-PA 1360 CG8930-PA 159..345 38..223 183 30.7 Plus