BDGP Sequence Production Resources |
Search the DGRC for GH23035
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 230 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | crim-RA |
Protein status: | GH23035.pep: gold |
Preliminary Size: | 886 |
Sequenced Size: | 757 |
Gene | Date | Evidence |
---|---|---|
CG6038 | 2001-01-01 | Release 2 assignment |
CG6038 | 2001-10-10 | Blastp of sequenced clone |
CG6038 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6038 | 2008-04-29 | Release 5.5 accounting |
CG6038 | 2008-08-15 | Release 5.9 accounting |
CG6038 | 2008-12-18 | 5.12 accounting |
757 bp (757 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060768
> GH23035.complete CACTGCTCTCTAGGGCGTATCTTTTATTATTTACGTTGTGTATTTGTGTT ATCTGTTTTATTTTGAAAAGAAACCCCGCTTTATTAAACAAAACATGCAC TACCATACGAATCTCATTGCAGCCCTGCTGCTGGCAGCTCTAATTCACGA GGGCTCTGCAATTTGGTGCTACCGCTGCACTTCGGCCACGCCCGGCTGTG CGGAGAAGTTTAACTGGCGGGGAATAGGATTCCTGGGCGAGCACTGCCCG GAACCGGACGACATTTGCGTCAAGGTGACGGAGCGACGCGGCGCCAGGGA AACAATCACACGTGACTGCCTAAGCGCGCTGAGCTTCCGCAAAGACATTC CCGCCGACAAATACGAAGGATGTCGTCCTGCCGCCCACGATGAAAAGCTA GCGAACTACGTAAACCACACGATCAAGGAGCACGACGTGCGCCGTGACTA CTACACGGACACCACGTTCTGTTTCTGCTTCCTCGACCATCGATGCAATG GGGCCAGCGGCCTACAAACGTCCGCCGTAATCGGTCTTCTCACTCTAATT CCTGCCCTGCTTCTACGCTAGAATCTCCTCTTGAGTGCAGTATTTAAGTG CCTTACTAACTCGCTCTGCAACTACGAATTCCGTCCAACATTCCACACTT TTTGTACAACCTTTTGACATGACTACAGCTTTTAGAGTCTTGTGTTTACT CAACTAATTAAATACATTTTACCATATTTATAAACAGGAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11701384..11701829 | 738..293 | 2230 | 100 | Minus |
chr3L | 24539361 | chr3L | 11702097..11702249 | 153..1 | 765 | 100 | Minus |
chr3L | 24539361 | chr3L | 11701885..11702026 | 293..152 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11710506..11710952 | 739..293 | 2235 | 100 | Minus |
3L | 28110227 | 3L | 11711220..11711372 | 153..1 | 765 | 100 | Minus |
3L | 28110227 | 3L | 11711008..11711149 | 293..152 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11703606..11704052 | 739..293 | 2235 | 100 | Minus |
3L | 28103327 | 3L | 11704320..11704472 | 153..1 | 765 | 100 | Minus |
3L | 28103327 | 3L | 11704108..11704249 | 293..152 | 710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11701885..11702025 | 153..293 | 100 | <- | Minus |
chr3L | 11702098..11702249 | 1..152 | 100 | Minus | |
chr3L | 11701384..11701828 | 294..738 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6038-RA | 1..477 | 95..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 1..477 | 95..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 1..477 | 95..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6038-RA | 1..477 | 95..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 1..477 | 95..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6038-RA | 1..738 | 1..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 1..738 | 1..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 15..752 | 1..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6038-RA | 1..738 | 1..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crim-RA | 15..752 | 1..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11711008..11711148 | 153..293 | 100 | <- | Minus |
3L | 11711221..11711372 | 1..152 | 100 | Minus | |
3L | 11710507..11710951 | 294..738 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11711008..11711148 | 153..293 | 100 | <- | Minus |
3L | 11711221..11711372 | 1..152 | 100 | Minus | |
3L | 11710507..11710951 | 294..738 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11711008..11711148 | 153..293 | 100 | <- | Minus |
3L | 11711221..11711372 | 1..152 | 100 | Minus | |
3L | 11710507..11710951 | 294..738 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11703607..11704051 | 294..738 | 100 | <- | Minus |
arm_3L | 11704108..11704248 | 153..293 | 100 | <- | Minus |
arm_3L | 11704321..11704472 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11703607..11704051 | 294..738 | 100 | <- | Minus |
3L | 11704108..11704248 | 153..293 | 100 | <- | Minus |
3L | 11704321..11704472 | 1..152 | 100 | Minus |
Translation from 94 to 570
> GH23035.hyp MHYHTNLIAALLLAALIHEGSAIWCYRCTSATPGCAEKFNWRGIGFLGEH CPEPDDICVKVTERRGARETITRDCLSALSFRKDIPADKYEGCRPAAHDE KLANYVNHTIKEHDVRRDYYTDTTFCFCFLDHRCNGASGLQTSAVIGLLT LIPALLLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crim-PA | 158 | CG6038-PA | 1..158 | 1..158 | 867 | 100 | Plus |
Translation from 94 to 570
> GH23035.pep MHYHTNLIAALLLAALIHEGSAIWCYRCTSATPGCAEKFNWRGIGFLGEH CPEPDDICVKVTERRGARETITRDCLSALSFRKDIPADKYEGCRPAAHDE KLANYVNHTIKEHDVRRDYYTDTTFCFCFLDHRCNGASGLQTSAVIGLLT LIPALLLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24521-PA | 156 | GF24521-PA | 5..155 | 6..156 | 687 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13894-PA | 158 | GG13894-PA | 1..158 | 1..158 | 750 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16386-PA | 162 | GH16386-PA | 16..141 | 16..141 | 590 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crim-PA | 158 | CG6038-PA | 1..158 | 1..158 | 867 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11580-PA | 159 | GI11580-PA | 1..143 | 1..143 | 638 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16339-PA | 159 | GL16339-PA | 1..157 | 1..157 | 653 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19312-PA | 159 | GA19312-PA | 18..157 | 18..157 | 649 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24719-PA | 158 | GM24719-PA | 1..158 | 1..158 | 820 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12781-PA | 158 | GD12781-PA | 1..158 | 1..158 | 822 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11259-PA | 164 | GJ11259-PA | 1..143 | 1..143 | 619 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12396-PA | 160 | GK12396-PA | 15..155 | 14..156 | 603 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20185-PA | 158 | GE20185-PA | 1..158 | 1..158 | 747 | 94.3 | Plus |