BDGP Sequence Production Resources |
Search the DGRC for GH23190
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 231 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1275-RC |
Protein status: | GH23190.pep: gold |
Sequenced Size: | 1265 |
Gene | Date | Evidence |
---|---|---|
CG1275 | 2002-12-13 | Blastp of sequenced clone |
CG1275 | 2008-04-29 | Release 5.5 accounting |
CG1275 | 2008-08-15 | Release 5.9 accounting |
CG1275 | 2008-12-18 | 5.12 accounting |
1265 bp (1265 high quality bases) assembled on 2002-12-13
GenBank Submission: BT003297
> GH23190.complete AGCCACGAAAATCAGAAGTAATCGCGAAAAACCCATCGTCATCGCTTTAA AGTCACTAATTGCTGCTAAAGATAAGAGCAGGCGGTATTGAAACAGGCAT TATCTGAGCAGAGTGAAGCATCAATCAAGTATACGCCATGTTGTTCTCAC TGGGCAGCGGCAAGGCCAACATGGATCCAGCGCTGATCAACTTTAAGGTG CTCTATGTGCTCACCCAGCTGTGCGGCCTGACCATGATCGTCCTGGTGGC CACCTGGATTGGCCAGCACTTCGGCGGTCTGGCCGGCACCTCAAATCCCG GCGTGGAGTTCAACTGGCATCCGCTGTTCATGACCATTGGCTTCATTTAC CTGTATGGCAACTCCATTCTGATCTATCGTGGTTTCCGCACCACGCGCAA GAAGACTCTGAAGCTTACCCACGCCGGCATCCACATGGGTGCATTCATTC TGACGGTGATTGCCCTGAAGACGGTCTTCGATTCCCACAACTTGGCCAAT CCGCCCATTCCCAACATGTACTCCCTGCACTCTTGGCTGGGGCTCTCCGC GGTGATCGTCTTCTCGCTGCAGTATGTGGCCGGATTTGTGGCCTTTTTGG CGCCGGGGTTGAGGGAGAACTACAGGATCGCCATGATGCCGCTGCACATC TACTTCGGACTCTTTGGATTCGTTCTGGCTATTGCTAGTGCCCTGATGGG CATAACCGAGAAGGCCATCTTCGCCATCAAAACTCCGGCTTACTCCACTC TTCCACCGGCTGGTGTGTTGGCCAATGTGATTGGAGTAATGTACGTGGTC TTCGGGGCGCTGGTTGTCTACCTAGCCACTGAGCCCTCCTACAAGCGGAA GCCCATTCCCGAGGACACGGCTCTGCTGAACTCCAGTTCTGTCAACGAGT AAGGGCTATGCCCATGCCCCAAATCAACTGCAATGCTTACTTAAGCTAAA AACTGTGCACAAAACCAAACGAAACCGAACCTGATCACACGGATGGTGCT TTCTTAGTGATGGAGATGGAGATTCGTCAAGATGAGTGTATTATCTGTAG CATGTACATAACCTAACGACTATGTATGACTCTGAATTATGAACATACGT ATACTTTGGTCACCAGTTGTGCAATGATTTCAGCGAGTGCTCAAATCATA ACGTATTTAACCTCAAGAAAAACATTTGCTTTGAACTGTACGAATACATC TATATATGTGTGTTATATATGCTTAAATAAATATATATATATATATAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2252152..2252670 | 1246..728 | 2565 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 2252728..2253091 | 727..364 | 1790 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 2253176..2253386 | 363..153 | 1025 | 99.1 | Minus |
chr3L | 24539361 | chr3L | 2256007..2256160 | 154..1 | 755 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2252752..2253271 | 1247..728 | 2600 | 100 | Minus |
3L | 28110227 | 3L | 2253329..2253692 | 727..364 | 1820 | 100 | Minus |
3L | 28110227 | 3L | 2253777..2253987 | 363..153 | 1055 | 100 | Minus |
3L | 28110227 | 3L | 2256605..2256758 | 154..1 | 770 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2252752..2253271 | 1247..728 | 2600 | 100 | Minus |
3L | 28103327 | 3L | 2253329..2253692 | 727..364 | 1820 | 100 | Minus |
3L | 28103327 | 3L | 2253777..2253987 | 363..153 | 1055 | 100 | Minus |
3L | 28103327 | 3L | 2256605..2256758 | 154..1 | 770 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2252205..2252670 | 728..1193 | 99 | <- | Minus |
chr3L | 2252728..2253091 | 364..727 | 99 | <- | Minus |
chr3L | 2253176..2253385 | 154..363 | 99 | <- | Minus |
chr3L | 2256008..2256160 | 1..153 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..765 | 138..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..765 | 138..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..765 | 138..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..765 | 138..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..765 | 138..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..1237 | 1..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..1246 | 1..1246 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 55..1300 | 1..1246 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 1..1237 | 1..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1275-RC | 55..1300 | 1..1246 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252753..2253271 | 728..1246 | 100 | <- | Minus |
3L | 2253329..2253692 | 364..727 | 100 | <- | Minus |
3L | 2253777..2253986 | 154..363 | 100 | <- | Minus |
3L | 2256606..2256758 | 1..153 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252753..2253271 | 728..1246 | 100 | <- | Minus |
3L | 2253329..2253692 | 364..727 | 100 | <- | Minus |
3L | 2253777..2253986 | 154..363 | 100 | <- | Minus |
3L | 2256606..2256758 | 1..153 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252753..2253271 | 728..1246 | 100 | <- | Minus |
3L | 2253329..2253692 | 364..727 | 100 | <- | Minus |
3L | 2253777..2253986 | 154..363 | 100 | <- | Minus |
3L | 2256606..2256758 | 1..153 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2253329..2253692 | 364..727 | 100 | <- | Minus |
arm_3L | 2252753..2253271 | 728..1246 | 100 | <- | Minus |
arm_3L | 2253777..2253986 | 154..363 | 100 | <- | Minus |
arm_3L | 2256606..2256758 | 1..153 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2252753..2253271 | 728..1246 | 100 | <- | Minus |
3L | 2253329..2253692 | 364..727 | 100 | <- | Minus |
3L | 2253777..2253986 | 154..363 | 100 | <- | Minus |
3L | 2256606..2256758 | 1..153 | 100 | Minus |
Translation from 137 to 901
> GH23190.pep MLFSLGSGKANMDPALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAG TSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGFRTTRKKTLKLTHAGIHM GAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGF VAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTP AYSTLPPAGVLANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSS SVNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24874-PA | 336 | GF24874-PA | 88..336 | 6..254 | 1210 | 91.6 | Plus |
Dana\GF11463-PA | 290 | GF11463-PA | 79..271 | 40..228 | 280 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14525-PA | 254 | GG14525-PA | 1..254 | 1..254 | 1296 | 98 | Plus |
Dere\GG22561-PA | 290 | GG22561-PA | 79..271 | 40..228 | 266 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16482-PA | 342 | GH16482-PA | 97..342 | 7..254 | 1099 | 82.3 | Plus |
Dgri\GH19961-PA | 287 | GH19961-PA | 54..268 | 18..228 | 292 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1275-PC | 254 | CG1275-PC | 1..254 | 1..254 | 1307 | 100 | Plus |
CG1275-PA | 340 | CG1275-PA | 92..340 | 6..254 | 1284 | 100 | Plus |
CG1275-PB | 340 | CG1275-PB | 92..340 | 6..254 | 1284 | 100 | Plus |
CG1275-PD | 243 | CG1275-PD | 1..243 | 12..254 | 1253 | 100 | Plus |
nemy-PL | 256 | CG8776-PL | 25..237 | 19..228 | 281 | 33.6 | Plus |
nemy-PK | 266 | CG8776-PK | 35..247 | 19..228 | 281 | 33.6 | Plus |
nemy-PB | 267 | CG8776-PB | 35..248 | 19..228 | 281 | 33.3 | Plus |
nemy-PG | 267 | CG8776-PG | 35..248 | 19..228 | 281 | 33.3 | Plus |
nemy-PE | 267 | CG8776-PE | 35..248 | 19..228 | 281 | 33.3 | Plus |
nemy-PA | 290 | CG8776-PA | 58..271 | 19..228 | 281 | 33.3 | Plus |
nemy-PM | 209 | CG8776-PM | 6..190 | 47..228 | 261 | 36.4 | Plus |
nemy-PC | 210 | CG8776-PC | 6..191 | 47..228 | 261 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12153-PA | 336 | GI12153-PA | 89..333 | 4..250 | 1140 | 85.8 | Plus |
Dmoj\GI19919-PA | 286 | GI19919-PA | 53..267 | 18..228 | 299 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24623-PA | 332 | GL24623-PA | 99..324 | 4..229 | 1076 | 88.9 | Plus |
Dper\GL17735-PA | 291 | GL17735-PA | 80..234 | 40..192 | 266 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11787-PA | 349 | GA11787-PA | 99..349 | 4..254 | 1196 | 88.4 | Plus |
Dpse\GA21312-PA | 291 | GA21312-PA | 80..234 | 40..192 | 268 | 40.8 | Plus |
Dpse\GA21312-PB | 267 | GA21312-PB | 56..210 | 40..192 | 267 | 40.8 | Plus |
Dpse\GA21312-PC | 210 | GA21312-PC | 5..153 | 46..192 | 262 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14130-PA | 254 | GM14130-PA | 1..254 | 1..254 | 1302 | 98.4 | Plus |
Dsec\GM20344-PA | 290 | GM20344-PA | 79..271 | 40..228 | 266 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13402-PA | 340 | GD13402-PA | 99..340 | 13..254 | 1265 | 98.8 | Plus |
Dsim\GD13398-PA | 243 | GD13398-PA | 1..243 | 12..254 | 1247 | 98.4 | Plus |
Dsim\GD25823-PA | 290 | GD25823-PA | 79..271 | 40..228 | 266 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13433-PA | 338 | GJ13433-PA | 92..338 | 6..254 | 1098 | 82.3 | Plus |
Dvir\GJ15086-PA | 287 | GJ15086-PA | 54..268 | 18..228 | 296 | 36.4 | Plus |
Translation from 137 to 901
> GH23190.hyp MLFSLGSGKANMDPALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAG TSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGFRTTRKKTLKLTHAGIHM GAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGF VAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTP AYSTLPPAGVLANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSS SVNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1275-PC | 254 | CG1275-PC | 1..254 | 1..254 | 1307 | 100 | Plus |
CG1275-PA | 340 | CG1275-PA | 92..340 | 6..254 | 1284 | 100 | Plus |
CG1275-PB | 340 | CG1275-PB | 92..340 | 6..254 | 1284 | 100 | Plus |
CG1275-PD | 243 | CG1275-PD | 1..243 | 12..254 | 1253 | 100 | Plus |
nemy-PL | 256 | CG8776-PL | 25..237 | 19..228 | 281 | 33.6 | Plus |