BDGP Sequence Production Resources |
Search the DGRC for GH23305
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 233 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | Mf-RC |
Protein status: | GH23305.pep: gold |
Sequenced Size: | 812 |
Gene | Date | Evidence |
---|---|---|
CG6803 | 2002-11-11 | Blastp of sequenced clone |
Zeelin1 | 2008-04-29 | Release 5.5 accounting |
Mf | 2008-08-15 | Release 5.9 accounting |
Mf | 2008-12-18 | 5.12 accounting |
812 bp (812 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001435
> GH23305.complete TAGATCGCTATTTTTTAGGAGTAAATTTAAATTCGAACGAGTTCAACGAT TTTTTCGTGAACAGAACAAAACAAATCGATCAAAATGTTCAAAAACCACT TGGAAATGATTGGGCGCAATGAGAGCCCCAGCAAGAAGGCGAAATTCTGG CAGTCCTACATCAGGTCCCTGAAGGGCTCCGAGGATATCCGTGCCCACGA GGCGCCCCGTGCCTCTCGTCCCTACAGCTCCTACCTGGACTCGCCCTCCT ACAGGAGCATCTATGACGAGCCCGCCACCGCCAATGAGCGCGTCCAGTCC TCTGGCTACAGATATCTGCCAGTGAGCCGCGACACCTACGGCTACTCGCC CCGTGCCATCTACGATCATCACTACAGCCGAACAATTCCAGCTAACTACG ACGCAGAGAAGGCCTGGAATGATCATCTGAAGCGCATGCAGGAGATCGAG CGCAGGTACCCATCTCGCTATGGTCTCTACTTGAGGGACAAGCCACTCAC GCCCAACTCGCTGGTGCCCCTGGAGTACGAGCCAGAGGACAAGCTGCTGG CTGAGCTCAACAAGGGTAAGGATATCAAAGACATTTTCTAAATCCAATGC CAGACACAAAAGTCCGACACCAACATCAGCAGGAAAGTAAACAACACAAC AACATCAACAACGAAAATTTTAAAATTAATATATTTATACGAAATGTAAG CACGAACTCAAAAAAAAAAAAAAATAGCAAATGAAATCTGATCGCAACAT CCAAAAACGAACTCAACGAAATTTTTTTCAAATTCAGCCAACACAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11000584..11000924 | 794..454 | 1705 | 100 | Minus |
chr3R | 27901430 | chr3R | 11002908..11003118 | 385..175 | 1055 | 100 | Minus |
chr3R | 27901430 | chr3R | 11003666..11003808 | 176..34 | 700 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 11000991..11001066 | 457..382 | 365 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15175942..15176295 | 807..454 | 1770 | 100 | Minus |
3R | 32079331 | 3R | 15178280..15178490 | 385..175 | 1055 | 100 | Minus |
3R | 32079331 | 3R | 15179038..15179180 | 176..34 | 715 | 100 | Minus |
3R | 32079331 | 3R | 15176362..15176437 | 457..382 | 365 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14916773..14917126 | 807..454 | 1770 | 100 | Minus |
3R | 31820162 | 3R | 14919111..14919321 | 385..175 | 1055 | 100 | Minus |
3R | 31820162 | 3R | 14919869..14920011 | 176..34 | 715 | 100 | Minus |
3R | 31820162 | 3R | 14917193..14917268 | 457..382 | 365 | 98.6 | Minus |
3R | 31820162 | 3R | 14921039..14921071 | 33..1 | 165 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Juan | 4236 | Juan JUAN 4236bp | 3682..3792 | 649..756 | 151 | 62.2 | Plus |
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 449..580 | 639..771 | 139 | 59 | Plus |
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2597..2688 | 667..755 | 138 | 66 | Plus |
rover | 7318 | rover ROVER 7318bp | 765..855 | 635..731 | 119 | 62.9 | Plus |
rover | 7318 | rover ROVER 7318bp | 916..1006 | 635..731 | 119 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2442..2494 | 615..666 | 109 | 69.8 | Plus |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 733..834 | 355..454 | 108 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11000584..11000922 | 456..794 | 92 | <- | Minus |
chr3R | 11000993..11001062 | 386..455 | 100 | <- | Minus |
chr3R | 11002908..11003117 | 176..385 | 100 | <- | Minus |
chr3R | 11003667..11003808 | 34..175 | 99 | <- | Minus |
chr3R | 11004836..11004868 | 1..33 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 1..507 | 85..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 1..507 | 85..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 1..507 | 85..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 1..507 | 85..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 1..507 | 85..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 31..712 | 1..682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 31..824 | 1..794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 31..824 | 1..794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 31..712 | 1..682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mf-RC | 31..824 | 1..794 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15175955..15176293 | 456..794 | 100 | <- | Minus |
3R | 15176364..15176433 | 386..455 | 100 | <- | Minus |
3R | 15178280..15178489 | 176..385 | 100 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15175955..15176293 | 456..794 | 100 | <- | Minus |
3R | 15176364..15176433 | 386..455 | 100 | <- | Minus |
3R | 15178280..15178489 | 176..385 | 100 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15175955..15176293 | 456..794 | 100 | <- | Minus |
3R | 15176364..15176433 | 386..455 | 100 | <- | Minus |
3R | 15178280..15178489 | 176..385 | 100 | <- | Minus |
3R | 15179039..15179180 | 34..175 | 100 | <- | Minus |
3R | 15180208..15180240 | 1..33 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11001677..11002015 | 456..794 | 100 | <- | Minus |
arm_3R | 11002086..11002155 | 386..455 | 100 | <- | Minus |
arm_3R | 11004002..11004211 | 176..385 | 100 | <- | Minus |
arm_3R | 11004761..11004902 | 34..175 | 100 | <- | Minus |
arm_3R | 11005930..11005962 | 1..33 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14916786..14917124 | 456..794 | 100 | <- | Minus |
3R | 14917195..14917264 | 386..455 | 100 | <- | Minus |
3R | 14919111..14919320 | 176..385 | 100 | <- | Minus |
3R | 14919870..14920011 | 34..175 | 100 | <- | Minus |
3R | 14921039..14921071 | 1..33 | 100 | Minus |
Translation from 84 to 590
> GH23305.hyp MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT IPANYDAEKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEP EDKLLAELNKGKDIKDIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mf-PQ | 168 | CG6803-PQ | 1..168 | 1..168 | 898 | 100 | Plus |
Mf-PC | 168 | CG6803-PC | 1..168 | 1..168 | 898 | 100 | Plus |
Mf-PI | 230 | CG6803-PI | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PH | 236 | CG6803-PH | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PE | 166 | CG6803-PE | 1..160 | 1..160 | 856 | 100 | Plus |
Translation from 84 to 590
> GH23305.pep MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT IPANYDAEKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEP EDKLLAELNKGKDIKDIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17159-PA | 370 | GF17159-PA | 1..162 | 1..162 | 816 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20880-PA | 365 | GG20880-PA | 1..162 | 1..162 | 831 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14549-PA | 367 | GH14549-PA | 1..162 | 1..162 | 824 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mf-PQ | 168 | CG6803-PQ | 1..168 | 1..168 | 898 | 100 | Plus |
Mf-PC | 168 | CG6803-PC | 1..168 | 1..168 | 898 | 100 | Plus |
Mf-PI | 230 | CG6803-PI | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PH | 236 | CG6803-PH | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PD | 312 | CG6803-PD | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PJ | 313 | CG6803-PJ | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PF | 313 | CG6803-PF | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PM | 364 | CG6803-PM | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PL | 364 | CG6803-PL | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PB | 365 | CG6803-PB | 1..162 | 1..162 | 858 | 98.8 | Plus |
Mf-PE | 166 | CG6803-PE | 1..160 | 1..160 | 856 | 100 | Plus |
Mf-PO | 310 | CG6803-PO | 1..160 | 1..162 | 830 | 96.9 | Plus |
Mf-PN | 157 | CG6803-PN | 1..153 | 1..160 | 796 | 95 | Plus |
Mf-PG | 157 | CG6803-PG | 1..153 | 1..160 | 796 | 95 | Plus |
Mf-PA | 157 | CG6803-PA | 1..153 | 1..160 | 796 | 95 | Plus |
Mf-PP | 119 | CG6803-PP | 1..100 | 1..100 | 534 | 100 | Plus |
Mf-PK | 119 | CG6803-PK | 1..100 | 1..100 | 534 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23663-PA | 367 | GI23663-PA | 1..162 | 1..162 | 837 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21688-PA | 367 | GL21688-PA | 1..162 | 1..162 | 823 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19873-PD | 168 | GA19873-PD | 1..168 | 1..168 | 854 | 96.4 | Plus |
Dpse\GA19873-PB | 367 | GA19873-PB | 1..162 | 1..162 | 823 | 96.3 | Plus |
Dpse\GA19873-PC | 312 | GA19873-PC | 1..162 | 1..162 | 822 | 96.3 | Plus |
Dpse\GA19873-PA | 313 | GA19873-PA | 1..162 | 1..162 | 822 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25804-PA | 367 | GM25804-PA | 1..162 | 1..162 | 837 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20380-PA | 236 | GD20380-PA | 1..168 | 1..168 | 836 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23223-PA | 363 | GJ23223-PA | 1..162 | 1..162 | 824 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13979-PA | 368 | GK13979-PA | 1..162 | 1..162 | 820 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26409-PA | 313 | GE26409-PA | 1..162 | 1..162 | 829 | 97.5 | Plus |