BDGP Sequence Production Resources |
Search the DGRC for GH23451
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 234 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3678-RA |
Protein status: | GH23451.pep: gold |
Sequenced Size: | 1208 |
Gene | Date | Evidence |
---|---|---|
CG3678 | 2009-10-27 | Manual selection by Sue Celniker |
1208 bp assembled on 2010-02-11
GenBank Submission: BT120319.1
> GH23451.complete GCAGTTAAAGATTACAATTGGAAAATTAAGTTAAATTAATGAGATATTTA AGTGCGCCTAAGTGAATATGTCGCTAGATTATGAGAAGATGAGCTGGTCG GATGTACGCGATCAGTTCAGAACATGGCGCGAGGAGACGGGTCGCCACAG CGAGGAGGTGGTCCAGCTGTGGGTTGCTGTGCTGGAGGACAAGGTGCACA AGACCGGCAACGAGCGGCATCTCATCCTGGAGCAGGTGATCATCGCGGCA TTGGATACGGCTCGCTTTGACATCGCCACCAAGTGTACCAAGCAGCTGGC CCTCGAGTTCCCGGGCAGCCTGCGCGTGATGAAGTTCAAAGCGATGCGCT ACGAGGCCCTGGAGCAGTACGATGAGGCCGACGAGGTCCTGGATGCAATC ATTGCTAAGGACGAGACAAATGCCGCGCCCAGGAAGCGCAAGATTGCCAT CCTTAAGGCCCGTGGTCGTCGCCTGGAGGCCATCAAGGAGCTCAACGAGT ATCTGAAGAAGTTTATGTCTGACCAGGAGGCATGGCATGAGCTGTGCAAC ATGTATCTGGCTGAAGGCGAGTTTGGCAAAGCTGCCTTCTGCATGGAGGA GGTTTTGCTGCACAATCCGCATAGCCATCTAATACACCAGCGTTTGGCAG AAATACGATACACAATGGGTGGCGTCGAGAATATGGAATCGGCTCGCACT TACTATTCGCAGGCCCTGAAGCTTAATCCGCATAACTTGAGGGCCCTTTA TGGCATTTACTTGTGCTGCAACCATTTGGACAACTCTCGTGCTGTGAGCT CCAAACGGAAGGAGCTGCAAAAGTTGAGTCAATGGGCCCTCGAACAACTT TTGACTAAACAAACGATTGTACCCTTGGAGGCTGCCTTTGGAAACCTGGA AATTAAATCGAATTGACCAATATAAGCACTAATAATTTGTGCAATAGATG CCAGAATGTAATGGTTCCAAATATTCTCAGAAGTGGGTTTCCAGTTTCTG TTCTTTAAGCAGGTTACATAGATAAACAATTAAAGAAATAGGAGTAAAAA CAATTTTATAGTCAGTGCATCCAAGCAACTGTTTTTGGTGGTCTAGTATT GTTGACGGCATTGAAACCGGATAATTTAAAACATTTATTATTGAGGTAGG CAAAAATAGTCCTGTAATAAATTTAGATTAAACGCAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17556-RA | 1341 | CG17556-RA | 98..1282 | 3..1187 | 5790 | 99.2 | Plus |
CG3678-RA | 1077 | CG3678-RA | 34..1077 | 1..1044 | 5055 | 98.9 | Plus |
CG31274-RB | 1496 | CG31274-RB | 1389..1496 | 1187..1080 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12819028..12819546 | 1185..667 | 2595 | 100 | Minus |
chr3R | 27901430 | chr3R | 12814820..12815325 | 1185..667 | 2215 | 95.6 | Minus |
chr3R | 27901430 | chr3R | 12815668..12816079 | 512..101 | 2060 | 100 | Minus |
chr3R | 27901430 | chr3R | 12819889..12820300 | 512..101 | 2015 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 12815386..12815543 | 668..511 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 12819607..12819764 | 668..511 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 12816220..12816320 | 101..1 | 505 | 100 | Minus |
chr3R | 27901430 | chr3R | 12820412..12820510 | 101..3 | 420 | 94.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16994540..16995060 | 1187..667 | 2605 | 100 | Minus |
3R | 32079331 | 3R | 16990332..16990839 | 1187..667 | 2210 | 95.4 | Minus |
3R | 32079331 | 3R | 16991182..16991593 | 512..101 | 2060 | 100 | Minus |
3R | 32079331 | 3R | 16995403..16995814 | 512..101 | 2000 | 99 | Minus |
3R | 32079331 | 3R | 16990900..16991057 | 668..511 | 790 | 100 | Minus |
3R | 32079331 | 3R | 16995121..16995278 | 668..511 | 790 | 100 | Minus |
3R | 32079331 | 3R | 16991734..16991834 | 101..1 | 505 | 100 | Minus |
3R | 32079331 | 3R | 16995926..16996024 | 101..3 | 420 | 94.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16735371..16735891 | 1187..667 | 2605 | 100 | Minus |
3R | 31820162 | 3R | 16731221..16731670 | 1116..667 | 2085 | 97.5 | Minus |
3R | 31820162 | 3R | 16732013..16732424 | 512..101 | 2060 | 100 | Minus |
3R | 31820162 | 3R | 16736234..16736645 | 512..101 | 2000 | 99 | Minus |
3R | 31820162 | 3R | 16735952..16736109 | 668..511 | 790 | 100 | Minus |
3R | 31820162 | 3R | 16731731..16731888 | 668..511 | 790 | 100 | Minus |
3R | 31820162 | 3R | 16732565..16732665 | 101..1 | 505 | 100 | Minus |
3R | 31820162 | 3R | 16736757..16736855 | 101..3 | 420 | 94.9 | Minus |
3R | 31820162 | 3R | 16731163..16731222 | 1187..1128 | 300 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12819028..12819545 | 668..1185 | 100 | <- | Minus |
chr3R | 12819608..12819764 | 511..667 | 100 | <- | Minus |
chr3R | 12819891..12820299 | 102..510 | 99 | <- | Minus |
chr3R | 12820412..12820513 | 1..101 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 1..849 | 68..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 1..849 | 68..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 1..849 | 68..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 1..849 | 68..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 62..1247 | 1..1185 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 62..1247 | 1..1185 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 45..1230 | 1..1185 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17556-RA | 45..1230 | 1..1185 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16994542..16995059 | 668..1185 | 100 | <- | Minus |
3R | 16995122..16995278 | 511..667 | 100 | <- | Minus |
3R | 16995405..16995813 | 102..510 | 99 | <- | Minus |
3R | 16995926..16996027 | 1..101 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16994542..16995059 | 668..1185 | 100 | <- | Minus |
3R | 16995122..16995278 | 511..667 | 100 | <- | Minus |
3R | 16995405..16995813 | 102..510 | 99 | <- | Minus |
3R | 16995926..16996027 | 1..101 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16994542..16995059 | 668..1185 | 100 | <- | Minus |
3R | 16995122..16995278 | 511..667 | 100 | <- | Minus |
3R | 16995405..16995813 | 102..510 | 99 | <- | Minus |
3R | 16995926..16996027 | 1..101 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12820264..12820781 | 668..1185 | 100 | <- | Minus |
arm_3R | 12820844..12821000 | 511..667 | 100 | <- | Minus |
arm_3R | 12821127..12821535 | 102..510 | 99 | <- | Minus |
arm_3R | 12821648..12821749 | 1..101 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16735373..16735890 | 668..1185 | 100 | <- | Minus |
3R | 16735953..16736109 | 511..667 | 100 | <- | Minus |
3R | 16736236..16736644 | 102..510 | 99 | <- | Minus |
3R | 16736757..16736858 | 1..101 | 94 | Minus |
Translation from 67 to 915
> GH23451.pep MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNER HLILEQVIIAALDTARFDIATKCTKQLALEFPGSLRVMKFKAMRYEALEQ YDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFM SDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTM GGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKEL QKLSQWALEQLLTKQTIVPLEAAFGNLEIKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17917-PA | 293 | GF17917-PA | 1..293 | 1..282 | 1353 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16802-PA | 282 | GG16802-PA | 1..282 | 1..282 | 1484 | 97.9 | Plus |
Dere\GG16801-PA | 282 | GG16801-PA | 1..282 | 1..282 | 1484 | 97.9 | Plus |
Dere\GG11068-PA | 159 | GG11068-PA | 1..159 | 1..159 | 828 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18069-PA | 293 | GH18069-PA | 1..293 | 1..282 | 1257 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3678-PB | 282 | CG3678-PB | 1..282 | 1..282 | 1459 | 100 | Plus |
CG3678-PA | 282 | CG3678-PA | 1..282 | 1..282 | 1459 | 100 | Plus |
CG17556-PB | 282 | CG17556-PB | 1..282 | 1..282 | 1456 | 99.6 | Plus |
CG17556-PA | 282 | CG17556-PA | 1..282 | 1..282 | 1456 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23748-PA | 293 | GI23748-PA | 1..293 | 1..282 | 1290 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22995-PA | 293 | GL22995-PA | 1..293 | 1..282 | 1344 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14552-PA | 293 | GA14552-PA | 1..293 | 1..282 | 1344 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15395-PA | 282 | GM15395-PA | 1..282 | 1..282 | 1489 | 98.2 | Plus |
Dsec\GM24122-PA | 278 | GM24122-PA | 8..278 | 12..282 | 1430 | 98.5 | Plus |
Dsec\GM22065-PA | 120 | GM22065-PA | 2..120 | 30..148 | 605 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20260-PA | 282 | GD20260-PA | 1..282 | 1..282 | 1498 | 98.9 | Plus |
Dsim\GD20261-PA | 282 | GD20261-PA | 1..282 | 1..282 | 1498 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10594-PA | 293 | GJ10594-PA | 1..293 | 1..282 | 1278 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12757-PA | 293 | GK12757-PA | 1..293 | 1..282 | 1272 | 81.6 | Plus |
Translation from 67 to 915
> GH23451.hyp MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNER HLILEQVIIAALDTARFDIATKCTKQLSLEFPGSLRVMKFKAMRYEALEQ YDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFM SDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTM GGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKEL QKLSQWALEQLLTKQTIVPLEAAFGNLEIKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17556-PB | 282 | CG17556-PB | 1..282 | 1..282 | 1459 | 100 | Plus |
CG17556-PA | 282 | CG17556-PA | 1..282 | 1..282 | 1459 | 100 | Plus |
CG3678-PB | 282 | CG3678-PB | 1..282 | 1..282 | 1456 | 99.6 | Plus |
CG3678-PA | 282 | CG3678-PA | 1..282 | 1..282 | 1456 | 99.6 | Plus |