BDGP Sequence Production Resources |
Search the DGRC for GH23568
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 235 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | parvin-RA |
Protein status: | GH23568.pep: gold |
Sequenced Size: | 1836 |
Gene | Date | Evidence |
---|---|---|
CG32528 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32528 | 2004-10-22 | Blastp of sequenced clone |
CG32528 | 2008-04-29 | Release 5.5 accounting |
CG32528 | 2008-08-15 | Release 5.9 accounting |
CG32528 | 2008-12-18 | 5.12 accounting |
1836 bp (1836 high quality bases) assembled on 2004-10-22
GenBank Submission: BT016127
> GH23568.complete TGGGCCTGCGATCAGGTGGCAGCCCCAAGGGAAACTGATTGCTCAGCTCC GCCCGAAACGAATCGAAACAATAACACAAACTGTTCACTTAGTCCGGAAT TCTTGGAATCCAGCAGCACCATGTCCACACTGAACCGCCCTAAATCCCCG CACACGCCCACCGCCATTAAAAAGGGCGAGAAGGAGGACAGCTTCTGGGA CAAGTTCAGCACTTTGGGCCGCAAACGCGGCACCCGCGAAGTGAAGAAGG TCCAAGAGGAGGGCAAGTACGCCATCGACTCGCCTGGATCGCCCAGCCAG TATGACATCCCGCCGGAGGACTATGCCCTGCGCGAGCACGAACAGCGCGC CGTCATCGATCCACAGTCCATCAGTGATCCCCAGGTGATAAAGCTGCAGC GCATCCTCGTCGACTGGATCAACGACGAGCTGGCCGAGCAGCGCATAATT GTTCAGCACCTGGAAGAGGACATGTATGACGGCCAGGTGCTGCACAAGCT GTGGGAGAAGCTCACCGGCAAGAAGCTGGACGTTCCTGAGGTCACCCAGT CAGAGCAGGGCCAGCACGAGAAGCTCAACATCGTCCTGAAGGCCGTCAAC CATACACTCGGCTTTCACCAAAAGATTCCCAAGTGGTCGGTGGCCAGCGT GCACTCGAAGAACATTGTGGCCATATTACATCTGCTGGTGGCACTGGTGC GTCACTTCCGGGCGCCCGTTCGCCTGCCAGAGAACGTGTTCGTGACCGTC GTGATTGCGGAGAAGAATGCGGGCGTGCTGAACGCGCAGAAGTTCCAGGA GCAGATAACGTCCGAGTACGACGACCTGGGCATGCGCTGCGAAAAGGACG CCTTCGACACGCTGATCGACTGTGCGCCGGACAAGCTGGCCGTGGTGAAG AAGTCCTTGATCACGTTCGTGAACAAGCACCTGGCCAAGCTGAACTTTGA GATCAGCGATCTGAACACGGACTTTCGCGACGGCGTATACCTGTGCCTGC TGATGGGCCTGCTCGGTGGATTCTTTGTGCCGCTGCACGAGTTCCATTTG ACGCCGCAGGACGTGGATCAGATGGTCAGCAACGTGGCCTTCGCCTTCGA CCTGATGCAGGACGTGGGCCTGCCCAAACCAAAGGCGCGGCCGGAGGACA TCGTGAACATGGACCTCAAGTCCACCCTGCGCGTCCTATACAGCCTGTTC ACCATGTTCAGGGACTTCGCCTGAGTGAAACCCGGATGGAACGAGCCAGC GGGTTGCAGGAGCAACAAGCGGCGCCAATTTTACATTTTATATTAACTTT TTGATAGTGTTTACACGCCTAATTTATGTGCGTTCTCGAAACTGATTGTA GGCGATGCAGCGGTTAAAGCTTACTGATCCTAACTCTCAAAACCACAACT AAATGCTGCGTCGCGTATAATCAGCCCAAGGAATGTTTATATATATATAT ATATATTTATGTGTCGTACGTCTAACCACTGCGATCTGCTCCAGATTCAG ATTGCTCGGAACAGGAAGGAGCAGAGCAGAGCAGAGCTAACCCAAACCCA AAATCCGGCGGCCAGTTGTTAACTTGTCTTACTCACGTGCCAGACGTTGT AGTTGTTACTAAGTGAATTTATTGTATTAATACATTATTTGAACACAATA ACCGAGATTGTGCCTTTAGATCACACAGAGCTTTTGCAAATTATGTCACA GATCAGATTTTAACGCTGTAAATGTAGAAGTTTACGGAAAAGTCTTAAAA AAAAATTTTATTGTGTACGTTAAAAATTTGGATCAGAAAAATCAATAAAT ATTGCCAATAGCAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32528-RA | 1824 | CG32528-RA | 13..1824 | 1..1812 | 9060 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19635961..19637169 | 604..1812 | 6030 | 99.9 | Plus |
chrX | 22417052 | chrX | 19635522..19635793 | 332..603 | 1360 | 100 | Plus |
chrX | 22417052 | chrX | 19634780..19635020 | 1..241 | 1205 | 100 | Plus |
chrX | 22417052 | chrX | 19635351..19635443 | 240..332 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19747250..19748459 | 604..1813 | 6050 | 100 | Plus |
X | 23542271 | X | 19746811..19747082 | 332..603 | 1360 | 100 | Plus |
X | 23542271 | X | 19746069..19746309 | 1..241 | 1205 | 100 | Plus |
X | 23542271 | X | 19746640..19746732 | 240..332 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19755348..19756557 | 604..1813 | 6050 | 100 | Plus |
X | 23527363 | X | 19754909..19755180 | 332..603 | 1360 | 100 | Plus |
X | 23527363 | X | 19754167..19754407 | 1..241 | 1205 | 100 | Plus |
X | 23527363 | X | 19754738..19754830 | 240..332 | 465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19634780..19635020 | 1..241 | 100 | -> | Plus |
chrX | 19635353..19635442 | 242..331 | 100 | -> | Plus |
chrX | 19635522..19635793 | 332..603 | 100 | -> | Plus |
chrX | 19635961..19637169 | 604..1812 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 1..1104 | 121..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 1..1104 | 121..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
parvin-RA | 1..1104 | 121..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 1..1104 | 121..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
parvin-RA | 1..1104 | 121..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 13..1824 | 1..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 13..1824 | 1..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
parvin-RA | 13..1824 | 1..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32528-RA | 13..1824 | 1..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
parvin-RB | 29..1840 | 1..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19746069..19746309 | 1..241 | 100 | -> | Plus |
X | 19746642..19746731 | 242..331 | 100 | -> | Plus |
X | 19746811..19747082 | 332..603 | 100 | -> | Plus |
X | 19747250..19748458 | 604..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19746069..19746309 | 1..241 | 100 | -> | Plus |
X | 19746642..19746731 | 242..331 | 100 | -> | Plus |
X | 19746811..19747082 | 332..603 | 100 | -> | Plus |
X | 19747250..19748458 | 604..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19746069..19746309 | 1..241 | 100 | -> | Plus |
X | 19746642..19746731 | 242..331 | 100 | -> | Plus |
X | 19746811..19747082 | 332..603 | 100 | -> | Plus |
X | 19747250..19748458 | 604..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19640102..19640342 | 1..241 | 100 | -> | Plus |
arm_X | 19640675..19640764 | 242..331 | 100 | -> | Plus |
arm_X | 19640844..19641115 | 332..603 | 100 | -> | Plus |
arm_X | 19641283..19642491 | 604..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19754167..19754407 | 1..241 | 100 | -> | Plus |
X | 19754740..19754829 | 242..331 | 100 | -> | Plus |
X | 19754909..19755180 | 332..603 | 100 | -> | Plus |
X | 19755348..19756556 | 604..1812 | 100 | Plus |
Translation from 0 to 1223
> GH23568.hyp WACDQVAAPRETDCSAPPETNRNNNTNCSLSPEFLESSSTMSTLNRPKSP HTPTAIKKGEKEDSFWDKFSTLGRKRGTREVKKVQEEGKYAIDSPGSPSQ YDIPPEDYALREHEQRAVIDPQSISDPQVIKLQRILVDWINDELAEQRII VQHLEEDMYDGQVLHKLWEKLTGKKLDVPEVTQSEQGQHEKLNIVLKAVN HTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPVRLPENVFVTV VIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVK KSLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGGFFVPLHEFHL TPQDVDQMVSNVAFAFDLMQDVGLPKPKARPEDIVNMDLKSTLRVLYSLF TMFRDFA*
Translation from 120 to 1223
> GH23568.pep MSTLNRPKSPHTPTAIKKGEKEDSFWDKFSTLGRKRGTREVKKVQEEGKY AIDSPGSPSQYDIPPEDYALREHEQRAVIDPQSISDPQVIKLQRILVDWI NDELAEQRIIVQHLEEDMYDGQVLHKLWEKLTGKKLDVPEVTQSEQGQHE KLNIVLKAVNHTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPV RLPENVFVTVVIAEKNAGVLNAQKFQEQITSEYDDLGMRCEKDAFDTLID CAPDKLAVVKKSLITFVNKHLAKLNFEISDLNTDFRDGVYLCLLMGLLGG FFVPLHEFHLTPQDVDQMVSNVAFAFDLMQDVGLPKPKARPEDIVNMDLK STLRVLYSLFTMFRDFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20217-PA | 367 | GF20217-PA | 1..367 | 1..367 | 1781 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19255-PA | 367 | GG19255-PA | 1..367 | 1..367 | 1932 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17695-PA | 367 | GH17695-PA | 1..367 | 1..367 | 1804 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
parvin-PB | 367 | CG32528-PB | 1..367 | 1..367 | 1904 | 100 | Plus |
parvin-PA | 367 | CG32528-PA | 1..367 | 1..367 | 1904 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16102-PA | 367 | GI16102-PA | 1..367 | 1..367 | 1826 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15018-PA | 367 | GL15018-PA | 1..367 | 1..367 | 1914 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22568-PA | 367 | GA22568-PA | 1..367 | 1..367 | 1914 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22992-PA | 367 | GM22992-PA | 1..367 | 1..367 | 1940 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17466-PA | 367 | GD17466-PA | 1..367 | 1..367 | 1940 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15752-PA | 367 | GJ15752-PA | 1..367 | 1..367 | 1829 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25282-PA | 367 | GK25282-PA | 1..367 | 1..367 | 1832 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15874-PA | 367 | GE15874-PA | 1..367 | 1..367 | 1948 | 99.5 | Plus |