BDGP Sequence Production Resources |
Search the DGRC for GH23636
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 236 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4848-RA |
Protein status: | GH23636.pep: gold |
Preliminary Size: | 3008 |
Sequenced Size: | 2898 |
Gene | Date | Evidence |
---|---|---|
CG4848 | 2001-01-01 | Release 2 assignment |
CG4848 | 2001-09-19 | Blastp of sequenced clone |
CG4848 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4848 | 2008-04-29 | Release 5.5 accounting |
CG4848 | 2008-08-15 | Release 5.9 accounting |
CG4848 | 2008-12-18 | 5.12 accounting |
2898 bp (2898 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058448
> GH23636.complete TTATTGTTTTCTTAATTTAAATAAAACTAATTTGACGGCTAAATGACGGC CAATTTGTTAAACCTGAACGTGGACACGCTGTTTGAGCAGCACAGCGTGT CCGAGATAGACGAGGTGCACAAAAAGATCCAGTCGGTGGTGGAGAACAAG CGCGAGGAGTTGCGCACTCATGTCGGGGAGCGGTACCGAGATCTTTTGCA GGCGGCTGACACCATTGCTGCGATGCAAACGTCGGCCGGGACACTTATGG AGCAAGTGCGACACGTGCAGGCCAATTGCCGCAGTCTAAACGAGCAGCAG CTCCTGGGCTTCCAGTCAACTGCCAATGCAAGTGCTAAAGATGCCGCACT GAAGGAGAGGAACGCCGGAAAAAAGCTGCAGACCTACTACGGCACCATGG CTCAGATTAAGTTGCTTACTGCCCTGCCGGAACTAATCTGGACGCACTTG GACAACGATCGCTTCTATGCCGCTACTGAGTTGTTCATCTTCAGTCGCCA CATCAGCACGGGCTTGCAACTGGACGGCCAGAGTGCCCTGATGCAGAAAC TACCGGTAGCGCGCAAGCAATGGGAAATCCTGCGTCCCTTTCACGTGACC ATCAAACAAGCCATACTGACCGCACTGGAGAGGGAGGAACTCCTACAAGA AATGACTGTGGACTGCCTGCAGAGCCTTCTCTTGCTAGACAAAAGCGATT TGAGTACTGTGCTGAAATCCTTCTTGAACCTGCGCTCCTCAGCCTTTCTG AACTGCCTGCAAAGCGGTCCATCGGAGCCACGTCGCGTCAAGGATCGCAT TTTGGCTAGCTTAAACGTGCTCAACAGCACCGTGGAGCTTCTGGACAAGT GTCTTTTGGGTTATAGCCTTCTTTTTAGCCGCTTGGAGGAGTGTGCCTCT TCTACGTGTCCACCCAGCATCAACCGAATGGAGAGTAGCGAGCGCCAGCT GGTTCATCTTTTACCCGAAATCATCGCTGGTTTTAAGCCACAATTTGATG TACCTCAGCTAACACCTGAGCAGTTGGGTTCTTCACTTCAACAATGGCTA GATAAAATGAACGCCTTGGCAGCGGCTCACTTGCAGCAAGTCTTTGCACT AGTCACCAACATGCAGACCATCCAGGACATTAAGTCCGCGGCCAGAACTA ATGGTCGACCGGATTTCGTTCGCCTAGAACAGCAATTGCATCTTAAGCGT AGCCAGTTAGACTTCTACGCCAGAAAGTACGTGCCGTTGATCAACGCCAG AGTACGAGAGATAATTCGCAGCAGCTGGGCTTCCGCCATGAAGCTGACCT ACGAACAGGTACTATTGCTTATTGAAGCCGGTCAGTCGCAACCGCCTCTA CAAATTTGGCGGGAGCAGAGCGATGATTTGCCTTTAAGCTTGGCGGCAGC ACTCAGCGATCAACCAAAGCGACTGGCAAATCGGACGAAGGGCTATGACG GCGCAACAATAGAACTGTGTAAACGTTTTGACTCACATCTGGCGGATATC GTACAGGAGCTGAATGTGATGTTACAAGAACAAACGACGAGGGCTGAGGA CAAGGTTTCACTTATCGAGTTTCTGCGCGAAACGGCCGAGGAACAGCTGA CAGAGTATTTATCCAATTTGAAAGGTTTAGAGCTAAGGGAACGCCCTGCT CTGCTCCTGGCTTTGAGGAATAGTCTCGCCTTGGTCGAGCTGTGCCCCAA TTTAAAGTTGTGCTTCTGCCAGCCGTCCAGTTGGCGGCAGTGGACTGACA ACTCGGCGGGATTGGGAATTGAGCATTGGCAGCGCATTTGTGGCCTGATC GAAAAGGAGATGCTATCCTTTTGGCTGGTCATCGTTGACGATGTGTTGGC CGGCCACAATTGCGAAGAGAAACTGCCAAAGGTCATTAATCATGAAGTGG TTCTCAGCGACTTTGCGCTTTGGCAGACCTTGACACTGGAACAGCGCGAC GAGGACCAGGAGCAGAGTGTTCAGTCAACCATTCGAATCCCCAGTCAGCC GCGACTCTCTCTGCAGACGTATCTTCATCAGCTAATTCAGGCATTGAATT CGGTTGTTCCCCAAACTCTGCCACCCAAGGTATTGCAAGCATTCATTCAG CGGCTCATAGGGAAACTGCTCTGCCACTACGAGGGATTGGCCCACGCGGA ATGCACCAAAGCCAGTCAGAATATTGCCCTGCAACTATACTTTGATCTTA AGTTCCTGGAGCGCGTGTTCGCCATTTCACGTGAGGAGAGGACTCTCTAC GACCAAATCCACGCCCAGCAGAACCAACTGCGCGACTACATAGATCCCTT TGACTTCGAGCTGTTTGCCGAGCATATAACCGCTCATGTGTCCCGAGCTG CAAGCCGTCTGCAGGGTGAACTGGGAGTGCTTACTCCCTCGGCAGCTGCT CCCAGTCAGGGTGCAGCTGCTGCCAGTTCTTTGGCCCATGAAGCAGATCC CAATGTGCTGTGTCTCAGTTCTTCCGGATCCACGTCGCTGTGGTTCCCGC TGCTGCCCATTGTGATGCCCCAAGCTGCCGGAAGAGTTACTAGCGCAGAG CGGAAATCTCCGATCCAAGAGCCAGTTGAGAAAACGGCGACAACGACGCC GACGAGGAAGTCGGGTGGCAATGGAGCCCGCAAGGGAGACAGCAGCAAAT CCAAATCGAGCGCAGCTTCCTTCTTTGGGATGTCCCAGGAGTGGTTTCGC TAGAGGATTCAAATCAAGTGGCCTGTGAAGTGCATTCGAGCGGAATGCGG ATGGGATGCTCTTCTATTGTTAAGCTTAACCTACATAAATATATCCGAAC GTACTTGTAGTAGAAGAGGCGGGCAGCGCCCAGTAAATTGTAAGAAAGTC ACATACATTATAGAGATACTCGTATATACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8042997..8044055 | 1917..859 | 5250 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 8044121..8044806 | 861..176 | 3370 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 8042272..8042938 | 2583..1917 | 3335 | 100 | Minus |
chr3R | 27901430 | chr3R | 8041049..8041344 | 2879..2584 | 1480 | 100 | Minus |
chr3R | 27901430 | chr3R | 8044861..8045037 | 177..1 | 870 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12217606..12218664 | 1917..859 | 5295 | 100 | Minus |
3R | 32079331 | 3R | 12218730..12219415 | 861..176 | 3430 | 100 | Minus |
3R | 32079331 | 3R | 12216881..12217547 | 2583..1917 | 3335 | 100 | Minus |
3R | 32079331 | 3R | 12215657..12215953 | 2880..2584 | 1485 | 100 | Minus |
3R | 32079331 | 3R | 12219470..12219646 | 177..1 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11958437..11959495 | 1917..859 | 5295 | 100 | Minus |
3R | 31820162 | 3R | 11959561..11960246 | 861..176 | 3430 | 100 | Minus |
3R | 31820162 | 3R | 11957712..11958378 | 2583..1917 | 3335 | 100 | Minus |
3R | 31820162 | 3R | 11956488..11956784 | 2880..2584 | 1485 | 100 | Minus |
3R | 31820162 | 3R | 11960301..11960477 | 177..1 | 885 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8041049..8041344 | 2584..2879 | 100 | <- | Minus |
chr3R | 8042272..8042937 | 1918..2583 | 100 | <- | Minus |
chr3R | 8042997..8044054 | 860..1917 | 99 | <- | Minus |
chr3R | 8044123..8044805 | 177..859 | 99 | <- | Minus |
chr3R | 8044862..8045037 | 1..176 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 1..2661 | 43..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 1..2661 | 43..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 1..2661 | 43..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 1..2661 | 43..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 1..2661 | 43..2703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 45..2923 | 1..2879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 45..2923 | 1..2879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 41..2919 | 1..2879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 45..2923 | 1..2879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4848-RA | 41..2919 | 1..2879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12219471..12219646 | 1..176 | 100 | Minus | |
3R | 12215658..12215953 | 2584..2879 | 100 | <- | Minus |
3R | 12216881..12217546 | 1918..2583 | 100 | <- | Minus |
3R | 12217606..12218663 | 860..1917 | 100 | <- | Minus |
3R | 12218732..12219414 | 177..859 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12219471..12219646 | 1..176 | 100 | Minus | |
3R | 12215658..12215953 | 2584..2879 | 100 | <- | Minus |
3R | 12216881..12217546 | 1918..2583 | 100 | <- | Minus |
3R | 12217606..12218663 | 860..1917 | 100 | <- | Minus |
3R | 12218732..12219414 | 177..859 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12219471..12219646 | 1..176 | 100 | Minus | |
3R | 12215658..12215953 | 2584..2879 | 100 | <- | Minus |
3R | 12216881..12217546 | 1918..2583 | 100 | <- | Minus |
3R | 12217606..12218663 | 860..1917 | 100 | <- | Minus |
3R | 12218732..12219414 | 177..859 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8041380..8041675 | 2584..2879 | 100 | <- | Minus |
arm_3R | 8042603..8043268 | 1918..2583 | 100 | <- | Minus |
arm_3R | 8043328..8044385 | 860..1917 | 100 | <- | Minus |
arm_3R | 8044454..8045136 | 177..859 | 100 | <- | Minus |
arm_3R | 8045193..8045368 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11959563..11960245 | 177..859 | 100 | <- | Minus |
3R | 11956489..11956784 | 2584..2879 | 100 | <- | Minus |
3R | 11957712..11958377 | 1918..2583 | 100 | <- | Minus |
3R | 11958437..11959494 | 860..1917 | 100 | <- | Minus |
3R | 11960302..11960477 | 1..176 | 100 | Minus |
Translation from 42 to 2702
> GH23636.pep MTANLLNLNVDTLFEQHSVSEIDEVHKKIQSVVENKREELRTHVGERYRD LLQAADTIAAMQTSAGTLMEQVRHVQANCRSLNEQQLLGFQSTANASAKD AALKERNAGKKLQTYYGTMAQIKLLTALPELIWTHLDNDRFYAATELFIF SRHISTGLQLDGQSALMQKLPVARKQWEILRPFHVTIKQAILTALEREEL LQEMTVDCLQSLLLLDKSDLSTVLKSFLNLRSSAFLNCLQSGPSEPRRVK DRILASLNVLNSTVELLDKCLLGYSLLFSRLEECASSTCPPSINRMESSE RQLVHLLPEIIAGFKPQFDVPQLTPEQLGSSLQQWLDKMNALAAAHLQQV FALVTNMQTIQDIKSAARTNGRPDFVRLEQQLHLKRSQLDFYARKYVPLI NARVREIIRSSWASAMKLTYEQVLLLIEAGQSQPPLQIWREQSDDLPLSL AAALSDQPKRLANRTKGYDGATIELCKRFDSHLADIVQELNVMLQEQTTR AEDKVSLIEFLRETAEEQLTEYLSNLKGLELRERPALLLALRNSLALVEL CPNLKLCFCQPSSWRQWTDNSAGLGIEHWQRICGLIEKEMLSFWLVIVDD VLAGHNCEEKLPKVINHEVVLSDFALWQTLTLEQRDEDQEQSVQSTIRIP SQPRLSLQTYLHQLIQALNSVVPQTLPPKVLQAFIQRLIGKLLCHYEGLA HAECTKASQNIALQLYFDLKFLERVFAISREERTLYDQIHAQQNQLRDYI DPFDFELFAEHITAHVSRAASRLQGELGVLTPSAAAPSQGAAAASSLAHE ADPNVLCLSSSGSTSLWFPLLPIVMPQAAGRVTSAERKSPIQEPVEKTAT TTPTRKSGGNGARKGDSSKSKSSAASFFGMSQEWFR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17740-PA | 882 | GF17740-PA | 1..882 | 1..886 | 3812 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17153-PA | 886 | GG17153-PA | 1..886 | 1..886 | 4339 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15466-PA | 898 | GH15466-PA | 1..898 | 1..886 | 3012 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cog1-PC | 886 | CG4848-PC | 1..886 | 1..886 | 4488 | 100 | Plus |
Cog1-PA | 886 | CG4848-PA | 1..886 | 1..886 | 4488 | 100 | Plus |
Cog1-PB | 854 | CG4848-PB | 1..847 | 1..847 | 4287 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22466-PA | 884 | GI22466-PA | 1..884 | 1..886 | 3163 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21569-PA | 889 | GL21569-PA | 1..889 | 1..886 | 3764 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18476-PA | 889 | GA18476-PA | 1..889 | 1..886 | 3763 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26035-PA | 886 | GM26035-PA | 1..886 | 1..886 | 4548 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20593-PA | 543 | GD20593-PA | 1..506 | 1..506 | 2590 | 97 | Plus |
Dsim\GD24429-PA | 193 | GD24429-PA | 1..161 | 689..849 | 818 | 95.7 | Plus |
Dsim\GD20593-PA | 543 | GD20593-PA | 503..543 | 846..886 | 155 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10064-PA | 896 | GJ10064-PA | 1..896 | 1..886 | 3210 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11565-PA | 895 | GK11565-PA | 1..893 | 1..886 | 3121 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24542-PA | 886 | GE24542-PA | 1..886 | 1..886 | 4253 | 94.6 | Plus |
Translation from 42 to 2702
> GH23636.hyp MTANLLNLNVDTLFEQHSVSEIDEVHKKIQSVVENKREELRTHVGERYRD LLQAADTIAAMQTSAGTLMEQVRHVQANCRSLNEQQLLGFQSTANASAKD AALKERNAGKKLQTYYGTMAQIKLLTALPELIWTHLDNDRFYAATELFIF SRHISTGLQLDGQSALMQKLPVARKQWEILRPFHVTIKQAILTALEREEL LQEMTVDCLQSLLLLDKSDLSTVLKSFLNLRSSAFLNCLQSGPSEPRRVK DRILASLNVLNSTVELLDKCLLGYSLLFSRLEECASSTCPPSINRMESSE RQLVHLLPEIIAGFKPQFDVPQLTPEQLGSSLQQWLDKMNALAAAHLQQV FALVTNMQTIQDIKSAARTNGRPDFVRLEQQLHLKRSQLDFYARKYVPLI NARVREIIRSSWASAMKLTYEQVLLLIEAGQSQPPLQIWREQSDDLPLSL AAALSDQPKRLANRTKGYDGATIELCKRFDSHLADIVQELNVMLQEQTTR AEDKVSLIEFLRETAEEQLTEYLSNLKGLELRERPALLLALRNSLALVEL CPNLKLCFCQPSSWRQWTDNSAGLGIEHWQRICGLIEKEMLSFWLVIVDD VLAGHNCEEKLPKVINHEVVLSDFALWQTLTLEQRDEDQEQSVQSTIRIP SQPRLSLQTYLHQLIQALNSVVPQTLPPKVLQAFIQRLIGKLLCHYEGLA HAECTKASQNIALQLYFDLKFLERVFAISREERTLYDQIHAQQNQLRDYI DPFDFELFAEHITAHVSRAASRLQGELGVLTPSAAAPSQGAAAASSLAHE ADPNVLCLSSSGSTSLWFPLLPIVMPQAAGRVTSAERKSPIQEPVEKTAT TTPTRKSGGNGARKGDSSKSKSSAASFFGMSQEWFR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4848-PC | 886 | CG4848-PC | 1..886 | 1..886 | 4488 | 100 | Plus |
CG4848-PA | 886 | CG4848-PA | 1..886 | 1..886 | 4488 | 100 | Plus |
CG4848-PB | 854 | CG4848-PB | 1..847 | 1..847 | 4287 | 100 | Plus |