BDGP Sequence Production Resources |
Search the DGRC for GH23727
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 237 |
Well: | 27 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42575-RA |
Protein status: | GH23727.pep: gold |
Preliminary Size: | 2888 |
Sequenced Size: | 3056 |
Gene | Date | Evidence |
---|---|---|
CG7628 | 2001-01-01 | Release 2 assignment |
CG7628 | 2001-12-12 | Blastp of sequenced clone |
CG7628 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7628 | 2008-04-29 | Release 5.5 accounting |
CG7628 | 2008-08-15 | Release 5.9 accounting |
CG7628 | 2008-12-18 | 5.12 accounting |
3056 bp (3056 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070521
> GH23727.complete TATGAAAATAACGACAATGAAGTTTAAGCGCAAATATGGCTGTTTAGAGA ATATTTGAAAAGAATTTCTCACTTATTAATCAATTTGGATTTTTGTTTCG ACCCTCATTTGTTACGTAGTCTTTGTATTTTATAAGTTTCAAACGATTGT TTTGCACAACTCAAGTCATCATCCACCCAGTTAAATCCGCACCATACAAT AAAATACAACTTGAGTTTAGTTTTTCGAGGAGCAAGAAGTGAAATCAGTA TTTAGTTAGAGTTGAGAGAGTTTAGAGATTGGCTTGAGCCGAAGAGTTTT GACTAACATTGAACACCGAAAACCAAATTGTCGGCAACAATGGAGAGCTT TGCGCCGGAATTACTTTGGATGGTAGTCATCGGATTCCTAATCGCCTTCG TACTCGCCTTTGGCATCGGTGCCAACGACGTGGCCAACTCATTTGGCACC AGTGTCGGCTCCGGTGTTCTGACCATCCGGCAGGCATGCGTGCTGGCCAC CATTTGCGAAATTTCGGGTGCCGTTTTGATTGGCTACAAGGTATCGGATA CCATGCGCAAGGGAATCCTAGAAGTTGGCCTATACGAGGGCGCCGAGGAG GTTCTGATGCTGGGCTGCGTGGCCGCATTGGCCAGTAGCGCCGTTTGGCT GCTGGTGGCCACCTTTTTGAAGTTGCCTATTTCGGGAACGCACAGTATCG TTGGCTCTACCATTGGATTTTCGCTAGTGGCGCGCGGTGTACAGGGCCTA AAGTGGTCTACTTTGGGCACAATCGTCGGATCGTGGTTCATCTCACCGGT GCTGAGTGGAATTGTGAGCATTCTGCTCTTCCTGGCCATTCGTCGTTTCA TCCTACGTGCCCAGGAGCCGCTCAAGGCCGGATTTCGATCGCTGCCCATC TTCTACGGTGTAACGTTCTTCATCAACGTTATCAGCGTTGTGTTGGACGG GCCCAAGCTGCTCTACATGGACAACATACCCACTTGGATAGCACTGACCG CCAGTTTTGGTCTCTCTTTGCTGGTGGCATTGCTTACGCAATTGGTAGTG GTGCCTTTGCAGCGGCGCAAGATTGCCAAACGATTGCGGGCCGAGAATCC TGTCAAGTTTAATTTCGAGGACTCCGTGGAATCTTCCCCGTCGGGAAGTC CCAAGAAGCAGCGTCGTCCCCTGTCGCTGGTTAGCGAAGGAAAGCCACTG CCTGCCATCGCAGAAATAACCGAGCTGGTCTCGTTGAGCGACAACTCGCC GAGGACCTTTAAGTTGGCTCCATTCGGATTGGCGGCCAAGAACAACAATG CGCTTGGGGAGGAGTACAAGATCGATCCGCAGCTGATCAAAAAGGCTGAG GATCTGCTGGGCAAGGCTAGCCTGGACAACACGGATCTGACGATTACCAG TCTGAATTTTATCGACGAGCAGCAGCAACAACAGCAGCAGCAGCAAAATG GACGCAAGTTGCAGGAGTGCTTCAAGCGGATGCAGTCGCCCAAGGAGGAG CAGAAGAGCAAGACGAACTCCATTGGCACGGACTTGGAAACCGGATCGAC CAAAGCCACAAATAACAACCTTCAAGTGGTGGAGAGCGGCGGCAGCCTTG ATCTTATGATCAGTTCCACTTTATCGCCCAATTCCAGCAAGGTTCCTCTG ATCGAGAGCAAGGAGGCGCTGAATGAGCAGGAGGAGGAGCTGAAACGAAC GACGGGCGGTGGACGAAGAACCAGTGGCGCCGAGGAGACTCCGGAGATTT CAATGCTCTTCTCGTTTCTGCAGATCCTGACAGCCACATTTGGCAGTTTT GCGCACGGCGGCAATGATGTGAGCAACGCCATCGGCCCACTGATTGCCCT CTATATGATCTATCGCGAGGGATCGGTTATGCAGCAGGCCGAGAGTCCCA TCTATATTCTGATCTACGGCGGCATCGGCATCTCTGTGGGTCTCTGGCTG TGGGGACGACGAGTCATCGAGACCATTGGCAATGACCTTACGAAAATAAC CTCATCGACTGGCTTTACTATTGAAGTCGGAGCTGCCATCACCGTACTGC TGGCCAGCAAAATTGGCCTGCCCATTTCGACTACTCACTGCAAGGTCGGT TCGGTGGTTTTTGTGGGTCATGTGAGTGCATCAGGTCGCAAGAAGAAGAG TCAGCCGAATGATCAGACCGATAAGGAGACCCATAACGAAGTTGCGCCCA TGGATGATGGCAGTGTCGATTGGCATCTATTCCGGAATATTGCCTATGCA TGGATCGTAACGGTGCCGGTTACGGCGCTCCTCAGCGCCGGAATGATGTA CGTGCTGTGTGCCATCGCCGTGGACGACATGGGTGGGGCCTAAAGATGGA ACAGAGATTGCCATTCAATTATTAATTGTAATTGCAAAACCAAAATAATG TTTCGTAATTGTACAAGTTGGAAAACACAAAACTTAAATATTAAACACGC AAAAGGAAACTCAAGAAAAAGTGGTAAAATCTTAACTAAATTACTCGCCT AACTAAAGCATTGTATTTAGCTCATAGAACGTCTCTGAGTCTAACTGATA TTAATATTATTTAATATGTGTGTACGCCAAGCAAAGCCGTGATTTGATTT TATATCTATACACCTCGATTTGATTAGTTTATACCCGAACTTCACATTAC TTAAAATGCATTTGAGACTCATTTGTAAAGTTAGTCCCAACCACTCAAGT TATTTTACACCAATTAATAGATCAGAGCAAAACATTTGAATAAAATACAA ACTATGTGCAACAGAAAATGTTTATACGTTGTGGTAAGACCAATTTTTAT TTTATATTATCTTTTTTTTTCGTGTCAATTTAAATTGCCGTCTTTATTTA CAATTCGTACACTTGGTTCCAAGTTCGGTTCGTAACAATTCAAAACCTTA TGTATAAGGCTCTCCAGTCCGATTTAAATTTACATTCCATTGAGAGTCAG TTCGTAAAGTATTTCACTATGTAGTTATACGGAAAATAAATACGAAGTTA TGACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42575-RA | 3778 | CG42575-RA | 738..3752 | 1..3015 | 15075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11124540..11125536 | 2010..3006 | 4865 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 11120826..11121423 | 532..1129 | 2975 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 11120224..11120755 | 1..533 | 2585 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 11123966..11124470 | 1505..2009 | 2435 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 11123520..11123897 | 1129..1506 | 1875 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11133667..11134672 | 2010..3015 | 5030 | 100 | Plus |
3L | 28110227 | 3L | 11129952..11130549 | 532..1129 | 2990 | 100 | Plus |
3L | 28110227 | 3L | 11129349..11129881 | 1..533 | 2665 | 100 | Plus |
3L | 28110227 | 3L | 11133093..11133597 | 1505..2009 | 2525 | 100 | Plus |
3L | 28110227 | 3L | 11132647..11133024 | 1129..1506 | 1890 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11126767..11127772 | 2010..3015 | 5030 | 100 | Plus |
3L | 28103327 | 3L | 11123052..11123649 | 532..1129 | 2990 | 100 | Plus |
3L | 28103327 | 3L | 11122449..11122981 | 1..533 | 2665 | 100 | Plus |
3L | 28103327 | 3L | 11126193..11126697 | 1505..2009 | 2525 | 100 | Plus |
3L | 28103327 | 3L | 11125747..11126124 | 1129..1506 | 1890 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11120224..11120754 | 1..532 | 99 | -> | Plus |
chr3L | 11120827..11121423 | 533..1129 | 99 | -> | Plus |
chr3L | 11123521..11123897 | 1130..1506 | 92 | -> | Plus |
chr3L | 11123968..11124470 | 1507..2009 | 98 | -> | Plus |
chr3L | 11124540..11125536 | 2010..3006 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7628-RA | 1..2004 | 340..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 1..2004 | 340..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 1..2004 | 340..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7628-RA | 1..2004 | 340..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 1..2004 | 340..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7628-RA | 1..3006 | 1..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 697..3702 | 1..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 710..3715 | 1..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7628-RA | 1..3006 | 1..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42575-RA | 710..3715 | 1..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11129349..11129880 | 1..532 | 100 | -> | Plus |
3L | 11129953..11130549 | 533..1129 | 100 | -> | Plus |
3L | 11132648..11133024 | 1130..1506 | 100 | -> | Plus |
3L | 11133095..11133597 | 1507..2009 | 100 | -> | Plus |
3L | 11133667..11134663 | 2010..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11129349..11129880 | 1..532 | 100 | -> | Plus |
3L | 11129953..11130549 | 533..1129 | 100 | -> | Plus |
3L | 11132648..11133024 | 1130..1506 | 100 | -> | Plus |
3L | 11133095..11133597 | 1507..2009 | 100 | -> | Plus |
3L | 11133667..11134663 | 2010..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11129349..11129880 | 1..532 | 100 | -> | Plus |
3L | 11129953..11130549 | 533..1129 | 100 | -> | Plus |
3L | 11132648..11133024 | 1130..1506 | 100 | -> | Plus |
3L | 11133095..11133597 | 1507..2009 | 100 | -> | Plus |
3L | 11133667..11134663 | 2010..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11122449..11122980 | 1..532 | 100 | -> | Plus |
arm_3L | 11123053..11123649 | 533..1129 | 100 | -> | Plus |
arm_3L | 11125748..11126124 | 1130..1506 | 100 | -> | Plus |
arm_3L | 11126195..11126697 | 1507..2009 | 100 | -> | Plus |
arm_3L | 11126767..11127763 | 2010..3006 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11122449..11122980 | 1..532 | 100 | -> | Plus |
3L | 11123053..11123649 | 533..1129 | 100 | -> | Plus |
3L | 11125748..11126124 | 1130..1506 | 100 | -> | Plus |
3L | 11126195..11126697 | 1507..2009 | 100 | -> | Plus |
3L | 11126767..11127763 | 2010..3006 | 100 | Plus |
Translation from 339 to 2342
> GH23727.hyp MESFAPELLWMVVIGFLIAFVLAFGIGANDVANSFGTSVGSGVLTIRQAC VLATICEISGAVLIGYKVSDTMRKGILEVGLYEGAEEVLMLGCVAALASS AVWLLVATFLKLPISGTHSIVGSTIGFSLVARGVQGLKWSTLGTIVGSWF ISPVLSGIVSILLFLAIRRFILRAQEPLKAGFRSLPIFYGVTFFINVISV VLDGPKLLYMDNIPTWIALTASFGLSLLVALLTQLVVVPLQRRKIAKRLR AENPVKFNFEDSVESSPSGSPKKQRRPLSLVSEGKPLPAIAEITELVSLS DNSPRTFKLAPFGLAAKNNNALGEEYKIDPQLIKKAEDLLGKASLDNTDL TITSLNFIDEQQQQQQQQQNGRKLQECFKRMQSPKEEQKSKTNSIGTDLE TGSTKATNNNLQVVESGGSLDLMISSTLSPNSSKVPLIESKEALNEQEEE LKRTTGGGRRTSGAEETPEISMLFSFLQILTATFGSFAHGGNDVSNAIGP LIALYMIYREGSVMQQAESPIYILIYGGIGISVGLWLWGRRVIETIGNDL TKITSSTGFTIEVGAAITVLLASKIGLPISTTHCKVGSVVFVGHVSASGR KKKSQPNDQTDKETHNEVAPMDDGSVDWHLFRNIAYAWIVTVPVTALLSA GMMYVLCAIAVDDMGGA*
Translation from 339 to 2342
> GH23727.pep MESFAPELLWMVVIGFLIAFVLAFGIGANDVANSFGTSVGSGVLTIRQAC VLATICEISGAVLIGYKVSDTMRKGILEVGLYEGAEEVLMLGCVAALASS AVWLLVATFLKLPISGTHSIVGSTIGFSLVARGVQGLKWSTLGTIVGSWF ISPVLSGIVSILLFLAIRRFILRAQEPLKAGFRSLPIFYGVTFFINVISV VLDGPKLLYMDNIPTWIALTASFGLSLLVALLTQLVVVPLQRRKIAKRLR AENPVKFNFEDSVESSPSGSPKKQRRPLSLVSEGKPLPAIAEITELVSLS DNSPRTFKLAPFGLAAKNNNALGEEYKIDPQLIKKAEDLLGKASLDNTDL TITSLNFIDEQQQQQQQQQNGRKLQECFKRMQSPKEEQKSKTNSIGTDLE TGSTKATNNNLQVVESGGSLDLMISSTLSPNSSKVPLIESKEALNEQEEE LKRTTGGGRRTSGAEETPEISMLFSFLQILTATFGSFAHGGNDVSNAIGP LIALYMIYREGSVMQQAESPIYILIYGGIGISVGLWLWGRRVIETIGNDL TKITSSTGFTIEVGAAITVLLASKIGLPISTTHCKVGSVVFVGHVSASGR KKKSQPNDQTDKETHNEVAPMDDGSVDWHLFRNIAYAWIVTVPVTALLSA GMMYVLCAIAVDDMGGA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25245-PA | 812 | GF25245-PA | 400..810 | 264..665 | 1826 | 89.1 | Plus |
Dana\GF25245-PA | 812 | GF25245-PA | 1..266 | 1..266 | 1272 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15482-PA | 736 | GG15482-PA | 344..736 | 274..667 | 1890 | 93.7 | Plus |
Dere\GG15482-PA | 736 | GG15482-PA | 1..263 | 1..263 | 1349 | 99.2 | Plus |
Dere\GG15483-PA | 377 | GG15483-PA | 1..263 | 1..263 | 1329 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16931-PA | 676 | GH16931-PA | 1..674 | 1..666 | 2926 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NaPi-III-PB | 667 | CG42575-PB | 1..667 | 1..667 | 3345 | 100 | Plus |
NaPi-III-PA | 667 | CG7628-PA | 1..667 | 1..667 | 3345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13685-PA | 691 | GI13685-PA | 1..688 | 1..664 | 2832 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22764-PA | 676 | GL22764-PA | 1..676 | 1..667 | 2946 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20490-PA | 676 | GA20490-PA | 1..676 | 1..667 | 2984 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25253-PA | 666 | GM25253-PA | 1..666 | 1..667 | 3409 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14287-PA | 558 | GD14287-PA | 1..325 | 1..325 | 1666 | 99.4 | Plus |
Dsim\GD14287-PA | 558 | GD14287-PA | 326..558 | 434..667 | 1199 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14026-PA | 681 | GJ14026-PA | 1..679 | 1..665 | 3011 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20337-PA | 712 | GK20337-PA | 1..710 | 1..665 | 2886 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21792-PA | 666 | GE21792-PA | 1..665 | 1..666 | 3373 | 96.7 | Plus |