BDGP Sequence Production Resources |
Search the DGRC for GH23732
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 237 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | Hph-RA |
Protein status: | GH23732.pep: gold |
Preliminary Size: | 1877 |
Sequenced Size: | 1763 |
Gene | Date | Evidence |
---|---|---|
CG1114 | 2001-01-01 | Release 2 assignment |
CG31543 | 2001-07-04 | Blastp of sequenced clone |
Hph | 2008-04-29 | Release 5.5 accounting |
Hph | 2008-08-15 | Release 5.9 accounting |
Hph | 2008-12-18 | 5.12 accounting |
1763 bp (1763 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051594
> GH23732.complete AGTCGTTTGAGAACCCGTCATCTCCCAAGAACAGTAATTAACCAATTCAG GGTATCTAAAAAAGGATCCTGAAACAATTCAAATGCCAAGAACTTAATTC ACCCTTTCTCTGCACAACAACAACTAATAACTCTGTGGAGATACAAAGAT AGGACTTCAGTCTTAAAGCTGTCTCAAGAGTAATAGAGTTCTTGTGATAA CAGTGAGAAGCAAGCTGACTAATCAAGGCAAAATGATAACCTCCACGACC ACGGACTACAAAAACTTTTTTAAACACTCGGCACATCCTGCCAATGCTGA GCAGTACTTTCGGGAACTTTTGGACAAGCGTGAGCGCCGCTATGAGGATC TGTGCCGTAACATCATCAGCGACATGAACCAGTATGGTCTGTCCGTGGTG GACGACTTCCTGGGGATGGAGACGGGCCTGAAGATCCTCAACGAGGTTCG AAGCATGTACAACGCAGGAGCCTTCCAGGATGGCCAAGTGGTGACCAACC AGACGCCCGATGCACCCGCGGTGCGCGGTGACAAGATCCGAGGCGATAAG ATCAAGTGGGTTGGTGGCAATGAGCCGGGCTGCAGCAATGTCTGGTATCT GACCAATCAGATTGACTCTGTGGTGTATCGTGTTAACACGATGAAGGATA ATGGCATCTTGGGCAACTACCACATCAGGGAGCGCACGAGGGCAATGGTC GCTTGTTATCCGGGATCGGGAACTCACTACGTCATGCATGTGGACAATCC CCAAAAGGATGGCCGCGTTATAACGGCCATATACTACCTGAATATCAACT GGGATGCGCGGGAAAGTGGCGGCATTCTGCGAATTCGGCCAACACCCGGA ACCACAGTGGCGGATATTGAGCCCAAGTTTGATCGCCTGATATTCTTCTG GTCTGACATTCGGAATCCCCACGAAGTGCAGCCCGCTCACCGTACCCGCT ATGCCATCACCGTCTGGTACTTCGATGCCAAGGAACGCGAGGAGGCCCTC ATTAGGGCCAAGCTGGAAAACAGCAAGACGAACAATCTGGCAGCTCAAGC CCAAGCCCAACAGGCTGAACCAGACTCCACCACCACACCACCCGCAGCAC CAGCTTCATCCGCATCCAGTCTGCCGGTTAGCATGTCCACGGGAACGGGA GCGCTGAACGCCAATGTGTCGAGTAATTCCTGCGCCACCAGCAGCGAAAT ATGCACGTAACCCAAGCCGACAGCGCAGCTAAAGGCAACCAAAAAGTGTA AATTATTTTCAACCAAACACACATGTATAAAGCTAGTTAAAAACTATTTA TAGCTTCGGAGGGGCGGCAGCGCAAGCCCGCATTGCGAAAGTTAATCAAA GCTCCTTTAGTCGTTAAGCCTTCTAGTTTAGTCTCTAAGTCGTACCCTTA GTCATTTTCGCATTAACCATTAGCTTACTGCCATGTCAGCGTCCGAGTTG GTTGTTTATTAATTTTAGTTTGTTGCATCTTTGTCAGGACCTTTTGCCTA GCTCATTCTTAGTTTTTGGCTGCCAAAGTATTATACCTAAAGAGAAGTTA ACTAGATTCAATAACATAAGCAACTGTCGCGACGCTCATTGCATCTTATC TCAAAATTATTTAACAAGCCAGTAAATCGTGGACAAACGCGGTCACTGGC TAACACTCAATCTGTCGACTCTCATGCATCTTGTTAGACATCTTTTTCAT ATCGTTTACATCTAATAACAAACGGAAATAAATGTTTGTCCAAATAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1093125..1094039 | 831..1745 | 4575 | 100 | Plus |
chr3R | 27901430 | chr3R | 1090972..1091301 | 1..330 | 1650 | 100 | Plus |
chr3R | 27901430 | chr3R | 1092416..1092696 | 330..610 | 1405 | 100 | Plus |
chr3R | 27901430 | chr3R | 1092926..1093066 | 691..831 | 705 | 100 | Plus |
chr3R | 27901430 | chr3R | 1092781..1092866 | 607..692 | 430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5267461..5268376 | 831..1746 | 4580 | 100 | Plus |
3R | 32079331 | 3R | 5265308..5265637 | 1..330 | 1650 | 100 | Plus |
3R | 32079331 | 3R | 5266752..5267032 | 330..610 | 1405 | 100 | Plus |
3R | 32079331 | 3R | 5267262..5267402 | 691..831 | 705 | 100 | Plus |
3R | 32079331 | 3R | 5267117..5267202 | 607..692 | 430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5008292..5009207 | 831..1746 | 4580 | 100 | Plus |
3R | 31820162 | 3R | 5006139..5006468 | 1..330 | 1650 | 100 | Plus |
3R | 31820162 | 3R | 5007583..5007863 | 330..610 | 1405 | 100 | Plus |
3R | 31820162 | 3R | 5008093..5008233 | 691..831 | 705 | 100 | Plus |
3R | 31820162 | 3R | 5007948..5008033 | 607..692 | 430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1090972..1091301 | 1..330 | 100 | -> | Plus |
chr3R | 1092417..1092696 | 331..610 | 100 | -> | Plus |
chr3R | 1092785..1092865 | 611..691 | 100 | -> | Plus |
chr3R | 1092927..1093066 | 692..831 | 100 | -> | Plus |
chr3R | 1093126..1094039 | 832..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 1..978 | 233..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 1..978 | 233..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 1..978 | 233..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 1..978 | 233..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 1..978 | 233..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 367..2111 | 1..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 367..2111 | 1..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 370..2114 | 1..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 367..2111 | 1..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hph-RA | 370..2114 | 1..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5265308..5265637 | 1..330 | 100 | -> | Plus |
3R | 5266753..5267032 | 331..610 | 100 | -> | Plus |
3R | 5267121..5267201 | 611..691 | 100 | -> | Plus |
3R | 5267263..5267402 | 692..831 | 100 | -> | Plus |
3R | 5267462..5268375 | 832..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5265308..5265637 | 1..330 | 100 | -> | Plus |
3R | 5266753..5267032 | 331..610 | 100 | -> | Plus |
3R | 5267121..5267201 | 611..691 | 100 | -> | Plus |
3R | 5267263..5267402 | 692..831 | 100 | -> | Plus |
3R | 5267462..5268375 | 832..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5265308..5265637 | 1..330 | 100 | -> | Plus |
3R | 5266753..5267032 | 331..610 | 100 | -> | Plus |
3R | 5267121..5267201 | 611..691 | 100 | -> | Plus |
3R | 5267263..5267402 | 692..831 | 100 | -> | Plus |
3R | 5267462..5268375 | 832..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1091030..1091359 | 1..330 | 100 | -> | Plus |
arm_3R | 1092475..1092754 | 331..610 | 100 | -> | Plus |
arm_3R | 1092843..1092923 | 611..691 | 100 | -> | Plus |
arm_3R | 1092985..1093124 | 692..831 | 100 | -> | Plus |
arm_3R | 1093184..1094097 | 832..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5006139..5006468 | 1..330 | 100 | -> | Plus |
3R | 5007584..5007863 | 331..610 | 100 | -> | Plus |
3R | 5007952..5008032 | 611..691 | 100 | -> | Plus |
3R | 5008094..5008233 | 692..831 | 100 | -> | Plus |
3R | 5008293..5009206 | 832..1745 | 100 | Plus |
Translation from 232 to 1209
> GH23732.pep MITSTTTDYKNFFKHSAHPANAEQYFRELLDKRERRYEDLCRNIISDMNQ YGLSVVDDFLGMETGLKILNEVRSMYNAGAFQDGQVVTNQTPDAPAVRGD KIRGDKIKWVGGNEPGCSNVWYLTNQIDSVVYRVNTMKDNGILGNYHIRE RTRAMVACYPGSGTHYVMHVDNPQKDGRVITAIYYLNINWDARESGGILR IRPTPGTTVADIEPKFDRLIFFWSDIRNPHEVQPAHRTRYAITVWYFDAK EREEALIRAKLENSKTNNLAAQAQAQQAEPDSTTTPPAAPASSASSLPVS MSTGTGALNANVSSNSCATSSEICT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18932-PA | 334 | GF18932-PA | 1..334 | 1..325 | 1486 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12715-PA | 325 | GG12715-PA | 1..325 | 1..325 | 1742 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17757-PA | 462 | GH17757-PA | 169..462 | 34..325 | 1234 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hph-PA | 325 | CG44015-PA | 1..325 | 1..325 | 1719 | 100 | Plus |
Hph-PD | 478 | CG44015-PD | 187..478 | 34..325 | 1543 | 100 | Plus |
Hph-PC | 478 | CG44015-PC | 187..478 | 34..325 | 1543 | 100 | Plus |
Hph-PB | 278 | CG44015-PB | 1..278 | 48..325 | 1468 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22545-PA | 459 | GI22545-PA | 166..459 | 34..325 | 1349 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21637-PA | 304 | GL21637-PA | 175..296 | 34..153 | 624 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16313-PB | 347 | GA16313-PB | 1..347 | 1..325 | 1536 | 87 | Plus |
Dpse\GA16313-PA | 488 | GA16313-PA | 175..488 | 34..325 | 1362 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10798-PA | 325 | GM10798-PA | 1..325 | 1..325 | 1752 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19772-PA | 325 | GD19772-PA | 1..325 | 1..325 | 1761 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10149-PA | 473 | GJ10149-PA | 167..473 | 34..325 | 1328 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12967-PA | 493 | GK12967-PA | 174..433 | 34..284 | 1162 | 85.4 | Plus |
Translation from 232 to 1209
> GH23732.hyp MITSTTTDYKNFFKHSAHPANAEQYFRELLDKRERRYEDLCRNIISDMNQ YGLSVVDDFLGMETGLKILNEVRSMYNAGAFQDGQVVTNQTPDAPAVRGD KIRGDKIKWVGGNEPGCSNVWYLTNQIDSVVYRVNTMKDNGILGNYHIRE RTRAMVACYPGSGTHYVMHVDNPQKDGRVITAIYYLNINWDARESGGILR IRPTPGTTVADIEPKFDRLIFFWSDIRNPHEVQPAHRTRYAITVWYFDAK EREEALIRAKLENSKTNNLAAQAQAQQAEPDSTTTPPAAPASSASSLPVS MSTGTGALNANVSSNSCATSSEICT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hph-PA | 325 | CG44015-PA | 1..325 | 1..325 | 1719 | 100 | Plus |
Hph-PD | 478 | CG44015-PD | 187..478 | 34..325 | 1543 | 100 | Plus |
Hph-PC | 478 | CG44015-PC | 187..478 | 34..325 | 1543 | 100 | Plus |
Hph-PB | 278 | CG44015-PB | 1..278 | 48..325 | 1468 | 100 | Plus |