BDGP Sequence Production Resources |
Search the DGRC for GH23768
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 237 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9919-RA |
Protein status: | GH23768.pep: gold |
Preliminary Size: | 994 |
Sequenced Size: | 1646 |
Gene | Date | Evidence |
---|---|---|
CG9919 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9919 | 2002-06-13 | Blastp of sequenced clone |
CG9919 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9919 | 2008-04-29 | Release 5.5 accounting |
CG9919 | 2008-08-15 | Release 5.9 accounting |
CG9919 | 2008-12-18 | 5.12 accounting |
1646 bp (1646 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122130
> GH23768.complete CCTTGACGCAAGTCAGGGCATTGTGTTGAAAGCTTCATGATGAACATGCT CTTTGGCAATTGTGTGGGCAGCTGTGACCAGCTGGCCGGTCCACCGCCGG ACTTTATATTATCGATGCCGCCGCCGCCGCTGCCGTCCTTTCTAATCTCA AAGCCGGCGACGGTGGACATCCTGGTGCCCTCCAATGAGTCGCAGCCGTG CTTTGCCGCCTTCATGTGCGGCCATGGGATGCAGCACAACGAGAGCGGAA ACGCGCTAATGGAGCTGGTGAGAAGTGATTCCAAGAGTCTGGAGAGCGTC TGGCTGTTTGTCTCGTCCTGCATCGGGATCTTTGTGTTCGGCTGCTTCCT GGCCCTCATCGTGATGCGGTGCAGAGACAGCTCCTTTTTCTCGTACCACG ACGCCAATATCAAGCAGACGGCCATTAATGCCCTCGGCGAGGCGACCAAA TCCAATGCCTTCACATCCGGCGGAATTCTTTATCCCTGCGCCACGGCCAA CAGTAGGGATCTGCTCCAGAGCCAGCTGGTCAACGATAGCCGTCTACTGT GGGCCACACTAACGCCCCACGGCACCAGGCACTTCATCATCGAGAACTCC CAGGATGGGCACTACGAATCGGTGGACTATCGCGGCAAGTCGCACAGCCA GGTGTTCCGTGGCTACGAGAAGCATTCGCAGTCGTTTGTCAAGTCCTTTG ACAACAATGGCTTCGTTGACTACGACTATGAGGATCCCACGCCATTGATG GACTCCTACCATGATGACATGGACTCCGGCTACCAGGAGCCGCACGAGGT GACTGGCTCCCTGAAGCGTTCGGCGATGCGAACTGTGGAATCACTGAACA CTGACACCCCGACCAGCGGCGGTTCGAGCTCCAACTATCATACCAGCGCC AATCAGATCGGCAACACCAAGTCCATTAGCCGCAAGACGACGCTGTCACG TCGCATCAGCGATGCCTCCTCCCAGAACGGAACATCCATGTAAATCCATG CTGTCAATTGGGTAATGTACATTTCCCATGGAATGGAGGCCATTGGGATT GAGATCGGGGATACTCGGAGATGGGAGAAGAGAGATCCGGTCATGTCGTC CACAATAGAAACTGCAGAACGCAGTGAATACACGCTGATATTTTAGACTA TTTAAAAAAAAAAAAGAGTGAGGCACAAGTGCGGGCTGTTCTCGGGGATC ACAGGAGCAGTGCGTCCAGGAGACCAACCCGGGCTAACAGGATTACAACT GCTTGAATCGTAGCTCATTTTAAGCCCACTATGGATTGCATCCGCTGGTG TACCATGTATAATAATCGTGCACGAAATACTCGCTTGTAAACACACTACA CACACACACGTCTTTTATAAATAATACCCGCAACTATTAAAACTATATCA GATAATCCAACTAACGCTGATCGGAAAGGCCAACTATTGTATCTGCATAT AGCTATTACCAACCTATCACTTGGAGTCCTTCACGCCCGGATCGGGGTCA GGGGTCATGGGTCAGGAATAAATAAACATACATAGATTTTGAAAATACTC TGAACACGTCTCGCCTTCAGCGCTCGTTTAATTGTTAGCCATAAGAACAA TAAATAATAATAAAAATTCTCAGTAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16218169..16219102 | 1627..692 | 4585 | 99.6 | Minus |
chrX | 22417052 | chrX | 16219625..16219971 | 377..31 | 1705 | 99.4 | Minus |
chrX | 22417052 | chrX | 16219245..16219560 | 693..378 | 1565 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16328429..16329372 | 1635..692 | 4690 | 99.8 | Minus |
X | 23542271 | X | 16329895..16330241 | 377..31 | 1735 | 100 | Minus |
X | 23542271 | X | 16329515..16329830 | 693..378 | 1580 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16336527..16337470 | 1635..692 | 4690 | 99.7 | Minus |
X | 23527363 | X | 16337993..16338339 | 377..31 | 1735 | 100 | Minus |
X | 23527363 | X | 16337613..16337928 | 693..378 | 1580 | 100 | Minus |
X | 23527363 | X | 16338802..16338837 | 36..1 | 165 | 97.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 195..273 | 1543..1622 | 118 | 62.5 | Plus |
flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 4951..5032 | 1540..1622 | 115 | 61.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16218169..16219100 | 694..1627 | 99 | <- | Minus |
chrX | 16219245..16219560 | 378..693 | 99 | <- | Minus |
chrX | 16219625..16219969 | 33..377 | 99 | <- | Minus |
chrX | 16220438..16220469 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 1..957 | 37..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 1..957 | 37..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 1..957 | 37..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 1..957 | 37..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 1..957 | 37..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 2..1628 | 1..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 2..1628 | 1..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 21..1647 | 1..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 2..1628 | 1..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9919-RA | 21..1647 | 1..1627 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16328437..16329370 | 694..1627 | 100 | <- | Minus |
X | 16329515..16329830 | 378..693 | 100 | <- | Minus |
X | 16329895..16330239 | 33..377 | 100 | <- | Minus |
X | 16330708..16330739 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16328437..16329370 | 694..1627 | 100 | <- | Minus |
X | 16329515..16329830 | 378..693 | 100 | <- | Minus |
X | 16329895..16330239 | 33..377 | 100 | <- | Minus |
X | 16330708..16330739 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16328437..16329370 | 694..1627 | 100 | <- | Minus |
X | 16329515..16329830 | 378..693 | 100 | <- | Minus |
X | 16329895..16330239 | 33..377 | 100 | <- | Minus |
X | 16330708..16330739 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16222470..16223403 | 694..1627 | 100 | <- | Minus |
arm_X | 16223548..16223863 | 378..693 | 100 | <- | Minus |
arm_X | 16223928..16224272 | 33..377 | 100 | <- | Minus |
arm_X | 16224741..16224772 | 1..32 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16336535..16337468 | 694..1627 | 100 | <- | Minus |
X | 16337613..16337928 | 378..693 | 100 | <- | Minus |
X | 16337993..16338337 | 33..377 | 100 | <- | Minus |
X | 16338806..16338837 | 1..32 | 100 | Minus |
Translation from 36 to 992
> GH23768.hyp MMNMLFGNCVGSCDQLAGPPPDFILSMPPPPLPSFLISKPATVDILVPSN ESQPCFAAFMCGHGMQHNESGNALMELVRSDSKSLESVWLFVSSCIGIFV FGCFLALIVMRCRDSSFFSYHDANIKQTAINALGEATKSNAFTSGGILYP CATANSRDLLQSQLVNDSRLLWATLTPHGTRHFIIENSQDGHYESVDYRG KSHSQVFRGYEKHSQSFVKSFDNNGFVDYDYEDPTPLMDSYHDDMDSGYQ EPHEVTGSLKRSAMRTVESLNTDTPTSGGSSSNYHTSANQIGNTKSISRK TTLSRRISDASSQNGTSM*
Translation from 36 to 992
> GH23768.pep MMNMLFGNCVGSCDQLAGPPPDFILSMPPPPLPSFLISKPATVDILVPSN ESQPCFAAFMCGHGMQHNESGNALMELVRSDSKSLESVWLFVSSCIGIFV FGCFLALIVMRCRDSSFFSYHDANIKQTAINALGEATKSNAFTSGGILYP CATANSRDLLQSQLVNDSRLLWATLTPHGTRHFIIENSQDGHYESVDYRG KSHSQVFRGYEKHSQSFVKSFDNNGFVDYDYEDPTPLMDSYHDDMDSGYQ EPHEVTGSLKRSAMRTVESLNTDTPTSGGSSSNYHTSANQIGNTKSISRK TTLSRRISDASSQNGTSM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19620-PA | 249 | GF19620-PA | 1..249 | 75..318 | 1027 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19330-PA | 318 | GG19330-PA | 1..318 | 1..318 | 1670 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12464-PA | 323 | GH12464-PA | 1..323 | 2..318 | 1359 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9919-PA | 318 | CG9919-PA | 1..318 | 1..318 | 1683 | 100 | Plus |
CG9919-PB | 317 | CG9919-PB | 1..317 | 1..318 | 1667 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11142-PA | 319 | GI11142-PA | 1..319 | 2..318 | 1378 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15895-PA | 309 | GL15895-PA | 1..309 | 2..318 | 1268 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22123-PA | 309 | GA22123-PA | 1..309 | 2..318 | 1268 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13408-PA | 291 | GM13408-PA | 1..291 | 27..318 | 1544 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15755-PA | 316 | GD15755-PA | 1..316 | 2..318 | 1682 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18699-PA | 310 | GJ18699-PA | 1..282 | 2..285 | 1263 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10065-PA | 319 | GK10065-PA | 1..319 | 2..318 | 1358 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15977-PA | 317 | GE15977-PA | 1..317 | 1..318 | 1689 | 99.1 | Plus |