BDGP Sequence Production Resources |
Search the DGRC for GH23839
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 238 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10585-RA |
Protein status: | GH23839.pep: gold |
Preliminary Size: | 1959 |
Sequenced Size: | 1973 |
Gene | Date | Evidence |
---|---|---|
CG10585 | 2001-01-01 | Release 2 assignment |
CG10585 | 2001-07-04 | Blastp of sequenced clone |
CG10585 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10585 | 2008-04-29 | Release 5.5 accounting |
CG10585 | 2008-08-15 | Release 5.9 accounting |
CG10585 | 2008-12-18 | 5.12 accounting |
1973 bp (1973 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051597
> GH23839.complete CCGAAGCGGCGCTGCCGTGCGAAAACCTGTTCCCGCTCAAGACCGCCGTT ACACACCCCCTGCGCCGCCTCCTCGGAATTCCATGACACTGCGTGGGGCA ATAAAAACAAACAGAACGCTTGGCGGCCACCTGAGAGCGGAGCAGCGACC AACTGTAAAAGTGGGCCGCCCGGGAAGAAGAAGAAGCAGCGTAGGCAGCA GGTGACGCCGACAGCGACGTCGGCAGAGACGCAAGCAGCGACGGACCTCG AAGATTTCACTTTTCGACGAACGATTTAACTGAGCGGAGCTAAGAAACGC GATTTTCATACAAGCAATTGAAAAAAATAGTCGTGTTGTAGGCGAAAATA ACTAGAAAATGGCCATGTACCGCGCCAGTGGGTTAAGGATTATGCAACAG ATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTGGCCAAAGC TGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTCGACGACGA CGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGCCCCCGAGA CACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTCGGCTATCC CACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGATCGCCAATG TGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGCTGATGAAG ACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAAGCCTGGGG ATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACCCAGTGTTC CAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCCAAAGGGCT TTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTGCACAATAG CGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGTGGACACCT ACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCGGCGACTAT CTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAACCAGGAGGT GGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTCGGAATTCA TTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGCCAGGAACC TTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAGCACGACGT GATGACGCCAATGCCGATTGCCCAGGTTCTCGGCAATCCGGAGGAGGAAT GGGAGTGCCGTAATATCCTTAATGCGGGTAGCCTGCTGGGCAAATCCTGC CAAGCTTCGCTAAAGCTGGCCGGACAGAGTGAGGAACTGCAGCGACATGC TTACCGCTTTGGCAAACATTTGGCGCTCGCTTGGCAGGCTTGCTTGGATG CCGAACCTTTTCAGTGCCCCCAACTGCCGCTAGATGTTACTTTCAGTCTG GTTAGTGCTCCAGTCCTATTCCACTTGGAGCACGACCCTGGCATGTATTC TCAATTGGAGGCTGGCAAGCAGTCGGTCGATAACATCGACTACGACAAGA TCCACAAGGCCATTCTGGCCGGGCCGGCTTTGGCCAAAACCAAGGAACTG CAGCGGAAGCACACAGCCGCTGCCCTGGCCGTTCTGCAACATTTCCCGGC GACGGACGCTCGACAGGCTCTGGAGAACATCATTCTGGCCATGCAGGATC TTTGATCCCGAGCAGCAGTTACTGATTTTTCACGGGTTCAGGGCTTAGGT TAGTTGTATTTATTCCGTTGGGTAATTTTTCAGTAAAGCAGACGTTGTTG ACTAATCTTTAATGATTCATTTAAAGTAAAGTTTAAATGCTTTATTTTTC TGAACTTCAAGTAATACTTGGTGCAAGGTCACAAAAATATATTTTGTAAA TCGTCTTGTATCGCAAAAGTTCATTTTTATTATAAGGGAAAATATAGTTC GTCATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10585-RA | 2091 | CG10585-RA | 137..2091 | 1..1955 | 9775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21018094..21019150 | 899..1955 | 5285 | 100 | Plus |
chr3L | 24539361 | chr3L | 21016959..21017667 | 1..709 | 3545 | 100 | Plus |
chr3L | 24539361 | chr3L | 21017725..21017914 | 709..898 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21029085..21030147 | 899..1961 | 5315 | 100 | Plus |
3L | 28110227 | 3L | 21027950..21028658 | 1..709 | 3545 | 100 | Plus |
3L | 28110227 | 3L | 21028716..21028905 | 709..898 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21022185..21023247 | 899..1961 | 5315 | 100 | Plus |
3L | 28103327 | 3L | 21021050..21021758 | 1..709 | 3545 | 100 | Plus |
3L | 28103327 | 3L | 21021816..21022005 | 709..898 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1271..1371 | 1894..1795 | 125 | 62.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21016959..21017666 | 1..708 | 100 | -> | Plus |
chr3L | 21017725..21017914 | 709..898 | 100 | -> | Plus |
chr3L | 21018094..21019150 | 899..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 1..1347 | 359..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 1..1347 | 359..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 1..1347 | 359..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 1..1347 | 359..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 1..1347 | 359..1705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 56..2010 | 1..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 56..2010 | 1..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 36..1990 | 1..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 56..2010 | 1..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10585-RA | 36..1990 | 1..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21027950..21028657 | 1..708 | 100 | -> | Plus |
3L | 21028716..21028905 | 709..898 | 100 | -> | Plus |
3L | 21029085..21030141 | 899..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21027950..21028657 | 1..708 | 100 | -> | Plus |
3L | 21028716..21028905 | 709..898 | 100 | -> | Plus |
3L | 21029085..21030141 | 899..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21027950..21028657 | 1..708 | 100 | -> | Plus |
3L | 21028716..21028905 | 709..898 | 100 | -> | Plus |
3L | 21029085..21030141 | 899..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21021050..21021757 | 1..708 | 100 | -> | Plus |
arm_3L | 21021816..21022005 | 709..898 | 100 | -> | Plus |
arm_3L | 21022185..21023241 | 899..1955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21021050..21021757 | 1..708 | 100 | -> | Plus |
3L | 21021816..21022005 | 709..898 | 100 | -> | Plus |
3L | 21022185..21023241 | 899..1955 | 100 | Plus |
Translation from 358 to 1704
> GH23839.pep MAMYRASGLRIMQQMRRRIPVELQPLQVAKAAPALQTFTSQRWTSTTTTS GKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRWLLSDEIANVAL HLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDV EQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGE RDEQNNPLPYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWEC RNILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEP FQCPQLPLDVTFSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHK AILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALENIILAMQDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24292-PA | 453 | GF24292-PA | 1..453 | 3..448 | 2171 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16155-PA | 446 | GG16155-PA | 1..446 | 3..448 | 2345 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15641-PA | 445 | GH15641-PA | 1..445 | 3..448 | 2040 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10585-PB | 448 | CG10585-PB | 1..448 | 1..448 | 2306 | 100 | Plus |
CG10585-PA | 448 | CG10585-PA | 1..448 | 1..448 | 2306 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12688-PA | 444 | GI12688-PA | 5..444 | 8..448 | 1972 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24462-PA | 443 | GL24462-PA | 1..443 | 3..448 | 2120 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10416-PA | 449 | GA10416-PA | 1..449 | 3..448 | 2164 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22336-PA | 448 | GM22336-PA | 1..448 | 1..448 | 2392 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14926-PA | 448 | GD14926-PA | 1..448 | 1..448 | 2388 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12673-PA | 446 | GJ12673-PA | 1..446 | 3..448 | 2011 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25396-PA | 443 | GK25396-PA | 10..443 | 23..448 | 2079 | 89.9 | Plus |
Translation from 358 to 1704
> GH23839.hyp MAMYRASGLRIMQQMRRRIPVELQPLQVAKAAPALQTFTSQRWTSTTTTS GKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRWLLSDEIANVAL HLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDV EQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGE RDEQNNPLPYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWEC RNILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEP FQCPQLPLDVTFSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHK AILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALENIILAMQDL*