BDGP Sequence Production Resources |
Search the DGRC for GH23891
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 238 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9780-RA |
Protein status: | GH23891.pep: gold |
Preliminary Size: | 2304 |
Sequenced Size: | 2185 |
Gene | Date | Evidence |
---|---|---|
CG9780 | 2001-01-01 | Release 2 assignment |
CG9780 | 2001-09-19 | Blastp of sequenced clone |
CG9780 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9780 | 2008-04-29 | Release 5.5 accounting |
CG9780 | 2008-08-15 | Release 5.9 accounting |
CG9780 | 2008-12-18 | 5.12 accounting |
2185 bp (2185 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058449
> GH23891.complete TGTCTAAGCCGCAGTCTGGAAGCAGAAGCACGGAAGTGGGCCGAGGTATT AAGAGCGACCTTTTGCTGTTCCGACCTCTAAGAAGAAAACAAGGCCCACT ACCTCCGGCGCAAACGGCAAATGGCGTCGTGCTCATTTTGATTCGAGCGA CTACAGCACCAGCACCCAGGAGAAATGATTTCAAAAGCACTGGCCGTCCT GTGGATAGCTGGCATCGCCTACGGCCAGGACGATCTGCTCAGGGTGGAAA CCGAATTGTTGAGCTTCTCTCACAACCTAGAGCCGTATCTCGACACCAGC AAGCAGCCCTGCCAGGACTTCTACGGTTATGTCTGCTCGCACAGCGCCAA CCTCAGCGAGACTGGCAGGCAGCGATTCCAAAGCTTGCTTAAGGAAACGG ACGTGGCGCAGCTGATGGACATGGAACTCCAACTGATAAACTTCTTCAAG TCTTGCGAGAGCGGGCGTGGCGTAGAGGCGCTCAAGGGATCTCAATTGTA TAGGCAGAGTGGGGGCTGGCCTAGCTTGGAACCGAACAAAGTCAATGCCA GTCAGCGGACTAACCAAACCCAAAGATGGCTGGGACTTCTTGGGTACTTC CACGAAGTGGGCGCGCCCTATTTCTTCGAGACGTCGGTCACCATGCAGTC CAACAAGCGACTTGTGGTACTGCAACCCGACGGCACGCGCCGAAACACTC TAAGAAAATTCGAGCAGCGGGTGGGCGAAGTCCTGCAAAGCTTCGGGATA GAACAGAGCCGCGCCCACGTGACCGCCCTCGAAGTGCTCAGCTTGGAGCG CAGTAGACGGGACATTGTAAAGGCGGATCACGTCGAGGATCAAGTGCAGT TTTCCTATGGAAACTTTAAGCGCATCGTCTTCGGAAACGCCTCGCTGATC AGACTGGACTGGGATGGCTACTTCCGCAAGTTGCTAGGCGGCAAAACGCC ACAGGCCAGCGACACCATTGTAGTCAAACAACTGCCCAGACTGGTTGAGT ACTTCGCGCTGCTCCAAAACACAAGCATGGTTCGACTTCTTAATTGGATA TGGACGGACTACTTGATGGACATCGTAGATGCAGACTGCCACCAATTATC GGAAACCTACGCCGGGGACCTTTACGCCCACGTAGTGCAACGTGTTACGG CAAATCGAGTCGAACTGGCCCAAATGTACTCGGAGCTGGGAAAGGCCTAC ACAGACCAGCTAGGCGGCAGTGTGTGGATCGATGAGATCTCTAGGCAGAG CTCGAGACAGTTTTTGGGTAACATAATGCACACTACGCTGAATGGAGATG AGCGATTGGACGCGGCATACCACTCGATTTTGTTGGGTCGGCGGAGCCTC TACCGCAACCTGGAGAAGCTGCGCAAGTTTCAGCGCACGCGACGTTTGGC CTCCCATTCCGCCCAGCAGGTGCGTCGCTACGCCCAAATGTTCGCTCCAG TAAATGCGTTCCTAGGGCAGCACAATCTGAGCACGCCGCTCAACTACCTC CTACTGGGGGAGTTCTTTTCGCGAAGCCTTGTAGCCGCAGGTAGCAGCTC TCGTACGCAAGGAGCCTGGCGGAGCTCGGACTCCGAGAGGCGCTTTGCCA TCTTCCAACAGTGCGTAGGTAAGCAGACGAACGCCATCGATCTGCTTCTG AGCCTGCTCGCCCAAAGGCAAGCGCTTAGTGCTTACGGTCAGTGGCTTGC CACCCAGGCGGGGCTAGTGGAGAGAGTCGACGCGGTTCTGGCCGCCGGTA GCTCGAAGATGTCCCTACAGAGGCTCTTTTTCGTTACCAGCCTGCTCGTC GACTGCCGCTCCGAGCTGGGCGCCCTGCAGCAGGACCGTAAGCGGCAGGT GACTCACGCCACACTGCGCAACTCGCCGGAGTTCCTGGAGGCCTTTAGGT GCCGTCCTGGAGATGTCCTCTACCCGCAGGACCAGCGCTGCAATCCTCTT TAGGGTCGGACCTTGAACTTTTAGCTGCTGTTGCCACCGGTGGTGTTAAA AATCAATAGGACGTGCCTACAACAACTGGAGGGCTTCTAAGGCAGCGACC AACCCCCAATTGATTGATTTTTCCCGTCACATTTGCACAGTTTCATGGAT CACCATATGCTTACGGAAACGTTACGTTACGTGAAAAATAAATGTTGTTC GCTTGGAAAGACAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9780-RA | 2273 | CG9780-RA | 68..2230 | 1..2162 | 10775 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 117994..119087 | 1070..2162 | 99 | <- | Minus |
chr3R | 119473..120541 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 1..1779 | 175..1953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 1..1779 | 175..1953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 1..1779 | 175..1953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 1..1779 | 175..1953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 1..1779 | 175..1953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 16..2178 | 1..2162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 16..2178 | 1..2162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 20..2182 | 1..2162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 16..2178 | 1..2162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9780-RA | 20..2182 | 1..2162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4292274..4293367 | 1070..2162 | 99 | <- | Minus |
3R | 4293753..4294821 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4292274..4293367 | 1070..2162 | 99 | <- | Minus |
3R | 4293753..4294821 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4292274..4293367 | 1070..2162 | 99 | <- | Minus |
3R | 4293753..4294821 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 117996..119089 | 1070..2162 | 99 | <- | Minus |
arm_3R | 119475..120543 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4033105..4034198 | 1070..2162 | 99 | <- | Minus |
3R | 4034584..4035652 | 1..1069 | 100 | Minus |
Translation from 174 to 1952
> GH23891.pep MISKALAVLWIAGIAYGQDDLLRVETELLSFSHNLEPYLDTSKQPCQDFY GYVCSHSANLSETGRQRFQSLLKETDVAQLMDMELQLINFFKSCESGRGV EALKGSQLYRQSGGWPSLEPNKVNASQRTNQTQRWLGLLGYFHEVGAPYF FETSVTMQSNKRLVVLQPDGTRRNTLRKFEQRVGEVLQSFGIEQSRAHVT ALEVLSLERSRRDIVKADHVEDQVQFSYGNFKRIVFGNASLIRLDWDGYF RKLLGGKTPQASDTIVVKQLPRLVEYFALLQNTSMVRLLNWIWTDYLMDI VDADCHQLSETYAGDLYAHVVQRVTANRVELAQMYSELGKAYTDQLGGSV WIDEISRQSSRQFLGNIMHTTLNGDERLDAAYHSILLGRRSLYRNLEKLR KFQRTRRLASHSAQQVRRYAQMFAPVNAFLGQHNLSTPLNYLLLGEFFSR SLVAAGSSSRTQGAWRSSDSERRFAIFQQCVGKQTNAIDLLLSLLAQRQA LSAYGQWLATQAGLVERVDAVLAAGSSKMSLQRLFFVTSLLVDCRSELGA LQQDRKRQVTHATLRNSPEFLEAFRCRPGDVLYPQDQRCNPL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16819-PA | 613 | GF16819-PA | 1..613 | 1..592 | 2273 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11696-PA | 590 | GG11696-PA | 1..590 | 1..592 | 2782 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21824-PA | 590 | GH21824-PA | 27..587 | 31..589 | 1740 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nepl11-PA | 592 | CG9780-PA | 1..592 | 1..592 | 3038 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21929-PA | 596 | GI21929-PA | 1..585 | 1..590 | 1747 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12332-PA | 597 | GL12332-PA | 1..597 | 1..592 | 2260 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22031-PA | 597 | GA22031-PA | 1..597 | 1..592 | 2266 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10713-PA | 592 | GM10713-PA | 1..592 | 1..592 | 2942 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19690-PA | 593 | GD19690-PA | 1..593 | 1..592 | 2973 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14289-PA | 595 | GJ14289-PA | 9..591 | 8..592 | 1810 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12140-PA | 608 | GK12140-PA | 4..606 | 6..590 | 1924 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25364-PA | 592 | GE25364-PA | 1..592 | 1..592 | 2730 | 87.2 | Plus |
Translation from 174 to 1952
> GH23891.hyp MISKALAVLWIAGIAYGQDDLLRVETELLSFSHNLEPYLDTSKQPCQDFY GYVCSHSANLSETGRQRFQSLLKETDVAQLMDMELQLINFFKSCESGRGV EALKGSQLYRQSGGWPSLEPNKVNASQRTNQTQRWLGLLGYFHEVGAPYF FETSVTMQSNKRLVVLQPDGTRRNTLRKFEQRVGEVLQSFGIEQSRAHVT ALEVLSLERSRRDIVKADHVEDQVQFSYGNFKRIVFGNASLIRLDWDGYF RKLLGGKTPQASDTIVVKQLPRLVEYFALLQNTSMVRLLNWIWTDYLMDI VDADCHQLSETYAGDLYAHVVQRVTANRVELAQMYSELGKAYTDQLGGSV WIDEISRQSSRQFLGNIMHTTLNGDERLDAAYHSILLGRRSLYRNLEKLR KFQRTRRLASHSAQQVRRYAQMFAPVNAFLGQHNLSTPLNYLLLGEFFSR SLVAAGSSSRTQGAWRSSDSERRFAIFQQCVGKQTNAIDLLLSLLAQRQA LSAYGQWLATQAGLVERVDAVLAAGSSKMSLQRLFFVTSLLVDCRSELGA LQQDRKRQVTHATLRNSPEFLEAFRCRPGDVLYPQDQRCNPL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9780-PA | 592 | CG9780-PA | 1..592 | 1..592 | 3038 | 100 | Plus |