GH23906.complete Sequence
5626 bp (5626 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051598
> GH23906.complete
AACAACTCCAGCGAGAGCAACTGCAGCGCGATCAATTGCAGCTCCAACAG
CAACAGCAAGCTGCGGCCGCCGTTCAAATTGAACGCCAACGTCGCCAGGA
ATTGGAAAGACAGTTGCGGCTCGAGCAGGAGGCACGCTTCGAACGTGAGG
AACGCACTCGTCTGGAGCGCGAATACTACGAACAGCAATTGCAGCGACAA
CAGGTCGAAAGGCAGCAGCAATTGGACAGGCAACGCCAACAACAGGAGCA
GATGGAGCGACAGAGGCGGCAGGAGATGGAACTACGTCTCCAGCAACAGC
GAGAGCAGGCTGCCCAAGTCAATAACTTTATACACGCTCCCCAGTCTGTC
TTTCGACCCATTGAAAATGAAACGCAACCGCAACCGGGTATTTACAAGCC
CATAGCTCATAAATCTCAACCCAATCCAGCCGTTTGGAAACCACCAACGC
AGCAATCACAACCACCGCAGCAATCGCAGCAACATTTGCAACCGAGATCG
GCTACTACATATAGCAATACCCCCTCGCCATCCTCAACGGCCACCTCACC
CATCGGATTGCCCTGGGTGGCAAAACCGAAGGTGGACAATAGCGATTTTC
GACGCAAAGCGCACCACTTTGAAGAGAGGTCCTTGAGGGATAACATCGAA
CAACAGCAACAGCCAACGTATCCCAATGGCAACAATGGTTATTTGCAGCG
TCACAATTCCCTGCGCTCGAAAGCACCAGCATTGAGTGAGTTTAAGAAGA
GGCCATCCTTGCCGAATGCCATGGACCCGGGAACAGCTGCACCACCGCGA
CAGGTGTATCAAGCTCCACCGCCACCCACGAATATCTCATTTACGTACGC
CGATTTCCCGCCAGTTCGACGTCCACAAGGTGCTAGTGCTCACAACTACA
GGAGTCAACCTTGCCTAACAAGTGCTGTGGATCAGGTCGAGGCATTGACC
AATCCCCTGGGTGCACCTCTAGTGCTCACAAGCTCAAATCCCACTTATCT
GCCGCCACCTGGAAGCAGAAGATTCGACTACATCAGCAGTCCAGTCGATG
TGGATGCGGATAGTCCACCTAATAGTCCCACGAGCTTCATGACCATGCCC
AATCCCACTTTGATGACGGACAATACGGACGATGATCTCGATTTGGATTC
GGATAACAATATGCTGGAGTACCGGGCCGAAACAAAGGTGATGCGAAAGC
CACGCAGCCAAACGGCAGTAAGGGTGGCGGACAGAAGAAACGCTCACATG
AGTGACGATGAGGTCTATGGAAAGAACTCAAGGGCAGCCAAGTCCTTGCT
CTACACGATGAAGCAGCTAGGAGGTGGTCCTGGCAATGCCTCAGTTGGCA
ATAGCGGCCAGAGGAGGCAACCACTAACGGCTCCAAGTTCGCCAAAATCA
GGTTGTCTTTCGCCCGATGGCCGGCCGTATCAGGCGCCGTTGGTGGAACC
ACTCTTCCCGCAACTGAGCACCTTTGAGCCCAAACGACAGCCGCAGTTCG
CGAATTCGCCCATGTCAACACCGCCTGCTGTTAGCATGCCATCGATAAAC
TATCAAGCAAATCCCACGTACACACCACCCAGAAGCAATCAGAATAGCAA
CTCCTATTTGGGTGAGACCAACACCTCCTATGTGGTCACCTATCCCTTGG
ACGATTCTGGTGATGAACCCGAACCGGAATCGATGGCCACATCGGTGAGC
CAGCGATTGCGTCGCACTTCGGAACACTCGAATGCCAGCTCCTCGCTGTC
GTTGGGCAGCACCAGTTGGACAGCGAATCCGGTGCATAATACAGTTCCCA
GTGTACCGCTGGATTCCGCCATGGGTCCTCCAGTGGATCGCAGCACTAAG
CCGCAAGTTAGTCAGCCAGTTGGGCCAAAGATGCCGCAGCATGTTGCTCA
GAAGCAGATTCCTCAGCAGTTACCAAATCAATTACCACAACAGATTCCCC
AACAGTTGCCAAAGCAGTTACCCCAACAAATCCCACAACAGTTACCTCAA
CAATTGCCGCAACAGTTGCCAAAGCAGTTGCCTCAGCAGATCCCTCCACA
ATTGCCCAAGCAATTACCTCAACAGATCCCGCAGCCAGAGTTACCTCAAC
AACTGCCCAACAATCTGCCCAGACATGCACCCAAGTTGAGTTCGCGTAGT
CATACCATCCAGGGAGACTCCGGCTACGAGAATCGTCCTCTGCAGAATCG
CGTAATGTCCCAGCAAACCCTTAACTCCAGCATTATTACTAGCAACAACC
ACACCACCGTTCAGAAACAGCAAAAGGAGCAGCACATCAACGAGCTGCGC
CGCAAGAGTTTGGGCAATGTGCTGGAGAGCAGTCAAAGGAGCACGTACTT
CGAACAGGAGTACAAGTCTTCAGCACCACCAGATACGCCGGATATAGTGA
AATCATCGCTGCCCAAGGAGGATGCACCACTACTAAAGAAATTTGGGCCA
CCACAGCGTCATCACTACATGCCCAATTCGTACCAGAGTCCGCAGCTGAA
CAAGCAGGGCAATAGCAATAGCACCACCACCAGCAGTACCTCAGTAAGGA
GCACCACAGTGGTGCAACAGCAACATCACCAGCAACAACATCAGCAAATC
AAGCCAAGTATTGTGGAAACCCCGGCGACACCACAGCCACAAGTTCCGCC
CGAAGACGAGATACCCCACAACATAGTGTTCAACAATGTGAGCGCCTTTA
CATCGATGAGCAGGCGAAATCACGAGGAGGATTCTCACCAGGGTACGCAA
TCGGGTTCCAGGGTGAATCGATTGAGCAAGTGCGATTCGTGGAACCAAAT
TTGCCAGCTGCAACAGACTGCGGGTCCAAGTCCGGCCAAATACAACCAGC
CCGGTTCTCCAGGCGAACTGAGACGCACCAAATCGGGACACTCACTCGCC
GTGCCCAAACTCTACGAAGCGGGCATTGATAAGGCCCAGGTCAGCGAGAA
ACAGCGTACGGTGGCTGCCTACTTCTCCGGCCAGAAGTCACCAACTGGCG
GCCAAGTGGAGGAGTTACGAACATCGATGACGACAACGACCTCAAGTCGA
AAATCGGCCATTAATCGCACGAAAACGAGTGAAAAACTTTCGGCGGCAGC
TCGAAAATCATTGAGTTCGTTGACCACCACATCGAATGGTAACGTTTCCA
CCGCCGGTTTGGGCATGGTGGTGCGTGGTGGTGGTGTTGGTGGCATTGGT
GGTGGTGCTGCACTCAGTCGCAGTGCCACCATGCCGCACATCGCGAATCT
CAATCTGCTGGACGAGAGCAATGTGGAGGATGCCTTCGAGCAGCTAATGA
TGGGTGCCTAAAAATACCATATAAATAATCAAGAAATAACAAAACAGTCC
AGCCAACCACTCAACCACTCAAGCCAACAATTTAACCCACCCAAAAGAAA
ATATATGAAAGAACAAACGCATTGAGGCATTCCAGTTCGAAACTGGATGA
GAACATGATAAGAATAATCTCAATAATCTATAAAAAACAAGAAATAAATG
AAATATGAAGATATACGAAATCGAAATTGAATCGACATCGAAACGGAATG
ATAACTGTAACTTGTAACGGCAACTGTACTGATTAATGTTTACTGATTTA
CTCAAGCGCTACTGTTGAGCCTAGGATTAGCTTTGTTTTAGTCAAACCCA
CCACCCAGAACCCCCACCCACTTTTCCCATGTTCGAATCGAGCTAGTGAC
GAAGCAGTTAGAAAATCGCAGTTAACTATATAAAAAGAGCCAGCTATTGA
AAATTGAGGGACCACAGGCGGTTTCTTACTTCGTTTTTTTTTTTTCCAAT
TCAATTTTCAAAACACTTAACTCACAAACACGCTTCAATCGCGACAATAA
AGAGATTAAATAAAAATTTAAATGAAAATGTTTGCTGCACTGCGTCCCAA
TGAAGCCCCAAACAACAACAACAACAACAACAATAAGCAACAATAGCAAC
AAAAGCAACAACTTGATCAATATTCCGAGATTTGTGAGTTGAAAACGAAA
GAAATATCAGATGTACAGAATGCTAGACCCCCAATTATCCTGTTTTTGCC
AGCGCCCCTGCCCCGCCTTGTACTACCAAAAAAAGATAATAAGTTTATAA
AATATTGCTATACCGCCCAGCAGCAGCCTAACAGCATAAAAACCATACAC
ATCATACGAAAACATACAGTTCTTATGAAAATGAATGGTATTATTAGTAT
AACTTCGAAATTCAAATAAGAAAAACTTACAAAAAGAGTGAAAATTTGTT
TATACATGGTATTTTTATTTACCTACTGATGTCCAACTTCTTATTTAGAA
TTTTAACAAATTTCTTTAGTTATTTAATGCTATTAATTGTCGGACAACTG
TATACGCCGTATGTGTGTGTGTTTTTCTTGTACATATTTGTTTTGCCTGA
AAGTTTTTATTCAGCCAAGTGTGTAAATGTAAAAATGCGTCGATTTTTAG
CGCTTATTCCCCAATTTACTCCCCCTTACGTTGCGTTACGTTACGTTCTG
TTACGTTCTGTTACGTTTTGCTCGTTCGTTAGTTGGCTAATTGATTTGAT
TGATTTGATTGATTGACTGGTTGATTGGTTGGTTGGTTGGTCCAGCAAGG
ATTCGAATAAAGCATAAACAAAAATTGAAAAAAAAAGAAAACGGAAGCGG
CAAAAAGAAACCCCCATGTTGTCCCTCCTTTTTTAATCGACTGTTTCTCT
CTCTGTCGTCCTTTTGTACATATGTATTTATCTTACTTAGTTTTTTTTTT
GTTAACACCCCAGTAAACAGATGAGATGAGGAAACAGTGTGTTTTTCGTT
GATTTTAATGATCAGTTCTTTTTTTTTTTTTTTGTCTACACATATTTTGT
CGATCTGCTGATCTGCTCCTGTTCCCTGTCCTTCGATTTAAAGCATGCCG
TTCATTGATTTTTATCTCTAAGTGTAAATACTTTTTGTGCATGCGTTTTT
ATACATACATTCATAACTACACAGATGCAAAATGTGCGCAGTTTTAAGCA
TACAAATGAACATAAAATTGAGCTTATGCATTTGCATTCAAATTGTAAAT
ACTTTGTATGCATTTGCTTAATGGGAGTTCGAAACATTTGATTTTTCTCT
GTGTATTGAAAAACCAAGTACATGAATACACCCATGGTCAGCAGAAGCAA
TACCACCACCACCACCGCCGCCACAGTCATGTCCACACCATTAGCGACGA
TTTCTGATTGTTTCGTAGCGCGTTTTCCTTTCGTTGGGAATACCAAACCG
CAGAACACTGGGAAAAATAATTGCTGCCCGTGTGTGTGTGTGCGGCAGCT
TGAATAATGCCAATTTGTTTTTGAATTTTTTGTGTAGTAGCTGATATCAT
ATAACCAAAGAAAACAAACATATTTTTTGTGCTGTTTTTCGAAACGTTGC
CGTAGTGTGTAATTTTGTTGCCTGCCCAGAGATACAAAACACATGTAGTT
TTTCAATAACCCAATAGAATTGTTGATTACCCAAAACTGATTGATATTTT
ATTATTATTTTTTTTTTTTTTTTGTGTAATTGATTTTGTGCATGCCCCAA
AACTAATCAATGTAATTTGTTTGCTTCTCTTTTTTCTTCCACCCGCTGCA
AAAAAAAAAAAAAAAAAAAAAAAAAA
GH23906.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 16:22:54 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrX | 22417052 | chrX | 6472314..6477922 | 1..5599 | 27175 | 99.2 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:05:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6580041..6585663 | 1..5624 | 27885 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23527363 | X | 6588139..6593761 | 1..5624 | 27925 | 99.8 | Plus |
Blast to na_te.dros performed 2019-03-15 21:44:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2981 | 1950..2597 | 255 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6897 | 2500..2673 | 212 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6895 | 2482..2642 | 202 | 64.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2416 | 2490..2596 | 201 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6916 | 2447..2597 | 188 | 62.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6970 | 2490..2663 | 185 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2535 | 17..249 | 177 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2429 | 2480..2597 | 176 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2410 | 2485..2596 | 174 | 64.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..7002 | 8..307 | 169 | 55 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1036..1183 | 2469..2614 | 168 | 64.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2567 | 2482..2697 | 167 | 56.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2317..2802 | 1..483 | 166 | 53.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2478 | 2447..2595 | 166 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6844 | 2518..2642 | 161 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6939 | 1..220 | 153 | 57.8 | Plus |
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 934..1065 | 3393..3526 | 151 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2893 | 1..542 | 150 | 53.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2500 | 2424..2596 | 149 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2663 | 2241..2602 | 143 | 55.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1030..1135 | 2500..2597 | 140 | 66 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1525..1582 | 1..58 | 137 | 70.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6808 | 2565..2642 | 137 | 67.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1137 | 2566..2641 | 135 | 67.1 | Plus |
| McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1089..1175 | 5588..5496 | 135 | 65.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2408 | 2547..2642 | 133 | 65 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6775 | 2547..2597 | 133 | 77.4 | Plus |
| McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1079..1173 | 4338..4249 | 130 | 66 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2741..2827 | 2514..2596 | 129 | 67.8 | Plus |
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 659..811 | 4398..4245 | 127 | 58.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6826 | 1..59 | 124 | 67.8 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1594..1666 | 5536..5464 | 122 | 63 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2637 | 2262..2604 | 120 | 54.4 | Plus |
GH23906.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:45:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrX | 6472314..6474815 | 1..2502 | 99 | == | Plus |
| chrX | 6474926..6476228 | 2613..3910 | 96 | == | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:54:33 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 11630..14940 | 1..3311 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:47:01 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RJ | 11630..14940 | 1..3311 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:56:57 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RL | 11279..14589 | 1..3311 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:41:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 11630..14940 | 1..3311 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:01:47 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RW | 11117..14427 | 1..3311 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:31:01 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 12187..17784 | 1..5599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:47:01 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RL | 11847..17444 | 1..5599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:56:57 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 12198..17795 | 1..5599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:41:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 12187..17784 | 1..5599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:47 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 12198..17795 | 1..5599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6580041..6585638 | 1..5599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6580041..6585638 | 1..5599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:08 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6580041..6585638 | 1..5599 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:56:57 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6474074..6479671 | 1..5599 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:32:43 Download gff for
GH23906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6588139..6593736 | 1..5599 | 99 | | Plus |
GH23906.hyp Sequence
Translation from 2 to 3310
> GH23906.hyp
QLQREQLQRDQLQLQQQQQAAAAVQIERQRRQELERQLRLEQEARFEREE
RTRLEREYYEQQLQRQQVERQQQLDRQRQQQEQMERQRRQEMELRLQQQR
EQAAQVNNFIHAPQSVFRPIENETQPQPGIYKPIAHKSQPNPAVWKPPTQ
QSQPPQQSQQHLQPRSATTYSNTPSPSSTATSPIGLPWVAKPKVDNSDFR
RKAHHFEERSLRDNIEQQQQPTYPNGNNGYLQRHNSLRSKAPALSEFKKR
PSLPNAMDPGTAAPPRQVYQAPPPPTNISFTYADFPPVRRPQGASAHNYR
SQPCLTSAVDQVEALTNPLGAPLVLTSSNPTYLPPPGSRRFDYISSPVDV
DADSPPNSPTSFMTMPNPTLMTDNTDDDLDLDSDNNMLEYRAETKVMRKP
RSQTAVRVADRRNAHMSDDEVYGKNSRAAKSLLYTMKQLGGGPGNASVGN
SGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVEPLFPQLSTFEPKRQPQFA
NSPMSTPPAVSMPSINYQANPTYTPPRSNQNSNSYLGETNTSYVVTYPLD
DSGDEPEPESMATSVSQRLRRTSEHSNASSSLSLGSTSWTANPVHNTVPS
VPLDSAMGPPVDRSTKPQVSQPVGPKMPQHVAQKQIPQQLPNQLPQQIPQ
QLPKQLPQQIPQQLPQQLPQQLPKQLPQQIPPQLPKQLPQQIPQPELPQQ
LPNNLPRHAPKLSSRSHTIQGDSGYENRPLQNRVMSQQTLNSSIITSNNH
TTVQKQQKEQHINELRRKSLGNVLESSQRSTYFEQEYKSSAPPDTPDIVK
SSLPKEDAPLLKKFGPPQRHHYMPNSYQSPQLNKQGNSNSTTTSSTSVRS
TTVVQQQHHQQQHQQIKPSIVETPATPQPQVPPEDEIPHNIVFNNVSAFT
SMSRRNHEEDSHQGTQSGSRVNRLSKCDSWNQICQLQQTAGPSPAKYNQP
GSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEKQRTVAAYFSGQKSPTGG
QVEELRTSMTTTTSSRKSAINRTKTSEKLSAAARKSLSSLTTTSNGNVST
AGLGMVVRGGGVGGIGGGAALSRSATMPHIANLNLLDESNVEDAFEQLMM
GA*
GH23906.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34417-PU | 4979 | CG34417-PU | 3878..4979 | 1..1102 | 5744 | 100 | Plus |
| CG34417-PX | 4925 | CG34417-PX | 3824..4925 | 1..1102 | 5744 | 100 | Plus |
| CG34417-PW | 4808 | CG34417-PW | 3707..4808 | 1..1102 | 5744 | 100 | Plus |
| CG34417-PJ | 4979 | CG34417-PJ | 3878..4979 | 1..1102 | 5744 | 100 | Plus |
| CG34417-PL | 4862 | CG34417-PL | 3761..4862 | 1..1102 | 5744 | 100 | Plus |
| CG34417-PW | 4808 | CG34417-PW | 201..1177 | 1..886 | 201 | 20.4 | Plus |
GH23906.pep Sequence
Translation from 251 to 3310
> GH23906.pep
MERQRRQEMELRLQQQREQAAQVNNFIHAPQSVFRPIENETQPQPGIYKP
IAHKSQPNPAVWKPPTQQSQPPQQSQQHLQPRSATTYSNTPSPSSTATSP
IGLPWVAKPKVDNSDFRRKAHHFEERSLRDNIEQQQQPTYPNGNNGYLQR
HNSLRSKAPALSEFKKRPSLPNAMDPGTAAPPRQVYQAPPPPTNISFTYA
DFPPVRRPQGASAHNYRSQPCLTSAVDQVEALTNPLGAPLVLTSSNPTYL
PPPGSRRFDYISSPVDVDADSPPNSPTSFMTMPNPTLMTDNTDDDLDLDS
DNNMLEYRAETKVMRKPRSQTAVRVADRRNAHMSDDEVYGKNSRAAKSLL
YTMKQLGGGPGNASVGNSGQRRQPLTAPSSPKSGCLSPDGRPYQAPLVEP
LFPQLSTFEPKRQPQFANSPMSTPPAVSMPSINYQANPTYTPPRSNQNSN
SYLGETNTSYVVTYPLDDSGDEPEPESMATSVSQRLRRTSEHSNASSSLS
LGSTSWTANPVHNTVPSVPLDSAMGPPVDRSTKPQVSQPVGPKMPQHVAQ
KQIPQQLPNQLPQQIPQQLPKQLPQQIPQQLPQQLPQQLPKQLPQQIPPQ
LPKQLPQQIPQPELPQQLPNNLPRHAPKLSSRSHTIQGDSGYENRPLQNR
VMSQQTLNSSIITSNNHTTVQKQQKEQHINELRRKSLGNVLESSQRSTYF
EQEYKSSAPPDTPDIVKSSLPKEDAPLLKKFGPPQRHHYMPNSYQSPQLN
KQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSIVETPATPQPQVPP
EDEIPHNIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVNRLSKCDSWNQI
CQLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYEAGIDKAQVSEK
QRTVAAYFSGQKSPTGGQVEELRTSMTTTTSSRKSAINRTKTSEKLSAAA
RKSLSSLTTTSNGNVSTAGLGMVVRGGGVGGIGGGAALSRSATMPHIANL
NLLDESNVEDAFEQLMMGA*
GH23906.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG18469-PA | 1169 | GG18469-PA | 552..625 | 553..627 | 163 | 33.3 | Plus |
| Dere\GG18469-PA | 1169 | GG18469-PA | 571..641 | 552..623 | 158 | 34.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34417-PU | 4979 | CG34417-PU | 3961..4979 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PX | 4925 | CG34417-PX | 3907..4925 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PW | 4808 | CG34417-PW | 3790..4808 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PJ | 4979 | CG34417-PJ | 3961..4979 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PL | 4862 | CG34417-PL | 3844..4862 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PH | 4979 | CG34417-PH | 3961..4979 | 1..1019 | 5340 | 100 | Plus |
| CG34417-PT | 5182 | CG34417-PT | 3961..4977 | 1..1017 | 5330 | 100 | Plus |
| CG34417-PR | 5128 | CG34417-PR | 3961..4922 | 1..962 | 5055 | 100 | Plus |
| Ptip-PA | 2294 | CG32133-PA | 363..804 | 518..939 | 210 | 23.4 | Plus |
| CG44085-PM | 864 | CG44085-PM | 156..577 | 355..798 | 190 | 24.8 | Plus |
| CG44085-PO | 2381 | CG44085-PO | 156..577 | 355..798 | 190 | 24.8 | Plus |
| Hrs-PA | 647 | CG2903-PA | 506..595 | 542..625 | 178 | 48.4 | Plus |
| Hrs-PC | 760 | CG2903-PC | 619..708 | 542..625 | 178 | 48.4 | Plus |
| Hrs-PB | 760 | CG2903-PB | 619..708 | 542..625 | 178 | 48.4 | Plus |
| CG44085-PH | 756 | CG44085-PH | 233..615 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PL | 833 | CG44085-PL | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PI | 833 | CG44085-PI | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PC | 836 | CG44085-PC | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PF | 902 | CG44085-PF | 233..615 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PD | 918 | CG44085-PD | 233..615 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PG | 942 | CG44085-PG | 233..615 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PK | 979 | CG44085-PK | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PJ | 979 | CG44085-PJ | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PN | 1007 | CG44085-PN | 310..692 | 403..798 | 177 | 24.3 | Plus |
| CG44085-PP | 2246 | CG44085-PP | 206..588 | 403..798 | 177 | 24.3 | Plus |
| Hrs-PA | 647 | CG2903-PA | 496..586 | 516..607 | 165 | 44.7 | Plus |
| Hrs-PC | 760 | CG2903-PC | 609..699 | 516..607 | 165 | 44.7 | Plus |
| Hrs-PB | 760 | CG2903-PB | 609..699 | 516..607 | 165 | 44.7 | Plus |
| CG4049-PA | 1669 | CG4049-PA | 3..146 | 509..630 | 165 | 35.9 | Plus |
| CG3638-PH | 1136 | CG3638-PH | 648..1115 | 449..879 | 164 | 23.1 | Plus |
| CG3638-PL | 1224 | CG3638-PL | 736..1203 | 449..879 | 164 | 23.1 | Plus |
| CG3638-PG | 1472 | CG3638-PG | 736..1203 | 449..879 | 164 | 23.1 | Plus |
| kis-PF | 5191 | CG3696-PF | 373..891 | 370..962 | 163 | 20.9 | Plus |
| kis-PE | 5252 | CG3696-PE | 373..891 | 370..962 | 163 | 20.9 | Plus |
| kis-PA | 5322 | CG3696-PA | 373..891 | 370..962 | 163 | 20.9 | Plus |
| kis-PD | 5343 | CG3696-PD | 373..891 | 370..962 | 163 | 20.9 | Plus |
| kis-PC | 5517 | CG3696-PC | 373..891 | 370..962 | 163 | 20.9 | Plus |
| Ptip-PA | 2294 | CG32133-PA | 296..615 | 546..870 | 162 | 23.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM12498-PA | 1947 | GM12498-PA | 934..1947 | 1..1019 | 5174 | 95.8 | Plus |
