BDGP Sequence Production Resources |
Search the DGRC for GH23935
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 239 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9813-RC |
Protein status: | GH23935.pep: gold |
Sequenced Size: | 2173 |
Gene | Date | Evidence |
---|---|---|
CG9813 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9813 | 2005-05-19 | Blastp of sequenced clone |
CG9813 | 2008-04-29 | Release 5.5 accounting |
CG9813 | 2008-08-15 | Release 5.9 accounting |
CG9813 | 2008-12-18 | 5.12 accounting |
2173 bp (2173 high quality bases) assembled on 2005-05-19
GenBank Submission: BT023409
> GH23935.complete AGCAGACCTGCCTACCTTTTCACGTAAACTAGAAATCTGAGAGATAAAAC AAGTTACAAGTCAGTCTTTTACAGCTAGAACATCATGGCGACGAGGAATC TGTTGGCCATCCTTCTTTTGGCCAGCATCTGCATGACCCAGGCATATCCG GCTTTGTTGCCCTACATCTACAATCCTTCCAAGCGCAGCGGTGATACGGC TTTCCCCCAAATCGAGGACGATGTAAGTGAACTGGACCAGCTGCGGAATG AACCGGGAGCGGTGATGGCCAAGCGTCAGCACGATGGAAGTACAGCCCGC ACCACCACTACCACCAAGGAGAGTGTCGAGGAGGTCGCCGCTGTTCCCGA GCCAGGTGCACAACCAAATGCGAATATTATGCCCGACTTGGAGAGGCAGT TGGAGGTGGCGACGCCTCTGATTTCCACCACTACAACCACTAGCACGTCG GCCACCACCACTACGGCGACGTCCAAGGAGGAGGGCGAAAGGTCCCAGCT GGAGGAGCCGAAGACGCAGATCAAAACCGTAGTGGAGCCGACGGCCCATG CGAAGAACGCCAAAAGCTTCTTGCGTAGTCCGAATGGTCAGTACTCTTCG TTCGACATGGCCCAGTATATTTTTTGGACTGGAGATGAAACAGCTGTGGT AAAAGCCGTGGAAGAACTGGTTGAGGGGAAAGTGATCACTCGGGAGAGCG CCCTGAAGTTCCTGCAGGACATTCGGCTGGGAATAGAGTTCTTGCAGCGG TCCTATGCCAATCGAATTTTCCCCGAAGAGGTTCGCCAGAATCAGTTAAA GCGCCACAGTCCCGCCATTACCACGCCCCCAGCATCCACTACGACCACGA CGACAACAAGCACCACCACAACCACAGAAAAGCCATTCCCAGCAGTGCAC GAATCCGGTTCGGAATCAGGAATCGAGCGAGGCGCCGCAGGAGTCCTGCC CGCGAAGAGCTTCGATAGCTTCACCTTCTGGAACAAACTCAAAGTTTTGG ACAGCGAGGCACAGCAAGATTTGAATGACTATGATGAGGGTCGGGCCAAG ATTGTCGAGTACTTGTACAATGAATACTCCCTGGAGGAGATCCTTTACAA ACTGGCAAAGGTAATGTTTGCTCAATCGCTTTCGCATGGCTCCGATGAGG CCCAAATGGAGCTGCAGAAGCTTACGGAATTTCTAGAGCGCGAGGGTAAC ATGGGTGTCATACCCATCGACTTGCAAAAGAAGGTTTTAAGAGTTTTGCT GAGCGCATTGTCGGACACCCTGACCGAACATCCGGAGTTTCTGCCGGCGG CGCGGGTTAATCTGGCCAACCCATTTTACAGGCTTCCAATACACGCCCCT AGCCAATAAAGACACATTGGGCGGCCATCTCAGATTAATAGAAACCCCTA TAAATATATATATGTTAACCCGCATAATTCGCATCAGCTAAATGGCAAGC ATATACCCACTGATCGGCGCTACTCTGGGGAGGCGCTCTCTCGGATCTTC GATCCAACTCGACCTAATTAAGTTCATCCGATCGATTGGCACCTTTCACC TTCGTTTACGGATTAGCCTACGTGTAATATAGCAAAAGATACTCAAGTGA TATTTTGTGGTCAGGTGGAGTCGGCGGCAGATGCAGGTATCACCAAACCA AATCAAAAAAACTAAAGACACAACTGATGAGAGAGACTTGCGCCCCTTTG AGCTTTTAAAATTAATATAGACTATCTATATGTATATGTCCATATGTCCA TATGTCGATATGCATACGAATTGGCGCACTTGCTTATATTTGATATGAGT TTGTTAGTTAGATACATTCCGAGGTTGAGATGTCGAGGTCGCTGGCAAAA TCGATGGGCCACCAGAAACGACCGATTTGAAGCAGGAAAGGGCTCTGAGT CCGCCTATATCAGTAGCTAATATGGATATAACTTGTAACCGCTCCACAGA CGAGCGACTTTCGTGAATAGTTATTATTCTATTTGTTGTCCCCCTCCCTG AATAATTGAGCGTTACAGGCATTATTGATGGATTGGTTAAACGATTGATT GTGTTGCGAGTTACATATACGATATGCAAGTAAGAACTAGAACCTGTATC AACAAATTATCGATTATACACTCAATATACATAAATATATATATATATAT ATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9813.a | 2683 | CG9813.a | 1079..2682 | 553..2156 | 8020 | 100 | Plus |
CG9813.c | 2670 | CG9813.c | 1066..2669 | 553..2156 | 8020 | 100 | Plus |
CG9813-RA | 2637 | CG9813-RA | 1033..2636 | 553..2156 | 8020 | 100 | Plus |
CG9813.a | 2683 | CG9813.a | 193..685 | 63..555 | 2465 | 100 | Plus |
CG9813.c | 2670 | CG9813.c | 149..639 | 65..555 | 2455 | 100 | Plus |
CG9813-RA | 2637 | CG9813-RA | 149..639 | 65..555 | 2455 | 100 | Plus |
CG9813.a | 2683 | CG9813.a | 20..83 | 1..64 | 320 | 100 | Plus |
CG9813.c | 2670 | CG9813.c | 20..83 | 1..64 | 320 | 100 | Plus |
CG9813-RA | 2637 | CG9813-RA | 20..83 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9198289..9199190 | 2152..1241 | 4310 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 9203591..9203973 | 555..173 | 1915 | 100 | Minus |
chr3R | 27901430 | chr3R | 9199627..9199961 | 1018..684 | 1645 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 9199253..9199385 | 1241..1109 | 665 | 100 | Minus |
chr3R | 27901430 | chr3R | 9202720..9202850 | 684..554 | 625 | 98.5 | Minus |
chr3R | 27901430 | chr3R | 9204192..9204303 | 172..61 | 560 | 100 | Minus |
chr3R | 27901430 | chr3R | 9199456..9199552 | 1113..1017 | 485 | 100 | Minus |
chr3R | 27901430 | chr3R | 9204880..9204943 | 64..1 | 305 | 98.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13373100..13374015 | 2156..1241 | 4580 | 100 | Minus |
3R | 32079331 | 3R | 13378402..13378784 | 555..173 | 1915 | 100 | Minus |
3R | 32079331 | 3R | 13374447..13374781 | 1018..684 | 1675 | 100 | Minus |
3R | 32079331 | 3R | 13374078..13374210 | 1241..1109 | 665 | 100 | Minus |
3R | 32079331 | 3R | 13377533..13377663 | 684..554 | 655 | 100 | Minus |
3R | 32079331 | 3R | 13379003..13379114 | 172..61 | 560 | 100 | Minus |
3R | 32079331 | 3R | 13374276..13374372 | 1113..1017 | 485 | 100 | Minus |
3R | 32079331 | 3R | 13379685..13379748 | 64..1 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13113931..13114846 | 2156..1241 | 4580 | 100 | Minus |
3R | 31820162 | 3R | 13119233..13119615 | 555..173 | 1915 | 100 | Minus |
3R | 31820162 | 3R | 13115278..13115612 | 1018..684 | 1675 | 100 | Minus |
3R | 31820162 | 3R | 13114909..13115041 | 1241..1109 | 665 | 100 | Minus |
3R | 31820162 | 3R | 13118364..13118494 | 684..554 | 655 | 100 | Minus |
3R | 31820162 | 3R | 13119834..13119945 | 172..61 | 560 | 100 | Minus |
3R | 31820162 | 3R | 13115107..13115203 | 1113..1017 | 485 | 100 | Minus |
3R | 31820162 | 3R | 13120516..13120579 | 64..1 | 320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9198321..9199190 | 1241..2120 | 98 | <- | Minus |
chr3R | 9199254..9199383 | 1111..1240 | 100 | <- | Minus |
chr3R | 9199459..9199550 | 1019..1110 | 100 | <- | Minus |
chr3R | 9199627..9199960 | 685..1018 | 99 | <- | Minus |
chr3R | 9202720..9202848 | 556..684 | 98 | <- | Minus |
chr3R | 9203591..9203973 | 173..555 | 100 | <- | Minus |
chr3R | 9204192..9204299 | 65..172 | 100 | <- | Minus |
chr3R | 9204880..9204943 | 1..64 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RA | 868..1671 | 556..1359 | 100 | Plus | |
CG9813-RA | 1..471 | 85..555 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RA | 1..471 | 85..555 | 100 | -> | Plus |
CG9813-RA | 868..1671 | 556..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RF | 1..1275 | 85..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RA | 1..471 | 85..555 | 100 | -> | Plus |
CG9813-RA | 868..1671 | 556..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RF | 1..1275 | 85..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RB | 332..823 | 65..555 | 99 | -> | Plus |
CG9813-RB | 18..81 | 1..64 | 100 | -> | Plus |
CG9813-RB | 1220..2816 | 556..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RE | 25..579 | 1..555 | 100 | -> | Plus |
CG9813-RE | 976..2572 | 556..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RF | 28..2179 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RE | 25..579 | 1..555 | 100 | -> | Plus |
CG9813-RE | 976..2572 | 556..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9813-RF | 28..2179 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13374079..13374208 | 1111..1240 | 100 | <- | Minus |
3R | 13374279..13374370 | 1019..1110 | 100 | <- | Minus |
3R | 13373104..13374015 | 1241..2152 | 100 | <- | Minus |
3R | 13374447..13374780 | 685..1018 | 100 | <- | Minus |
3R | 13377533..13377661 | 556..684 | 100 | <- | Minus |
3R | 13378402..13378784 | 173..555 | 100 | <- | Minus |
3R | 13379003..13379110 | 65..172 | 100 | <- | Minus |
3R | 13379685..13379748 | 1..64 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13374079..13374208 | 1111..1240 | 100 | <- | Minus |
3R | 13374279..13374370 | 1019..1110 | 100 | <- | Minus |
3R | 13373104..13374015 | 1241..2152 | 100 | <- | Minus |
3R | 13374447..13374780 | 685..1018 | 100 | <- | Minus |
3R | 13377533..13377661 | 556..684 | 100 | <- | Minus |
3R | 13378402..13378784 | 173..555 | 100 | <- | Minus |
3R | 13379003..13379110 | 65..172 | 100 | <- | Minus |
3R | 13379685..13379748 | 1..64 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13374079..13374208 | 1111..1240 | 100 | <- | Minus |
3R | 13374279..13374370 | 1019..1110 | 100 | <- | Minus |
3R | 13373104..13374015 | 1241..2152 | 100 | <- | Minus |
3R | 13374447..13374780 | 685..1018 | 100 | <- | Minus |
3R | 13377533..13377661 | 556..684 | 100 | <- | Minus |
3R | 13378402..13378784 | 173..555 | 100 | <- | Minus |
3R | 13379003..13379110 | 65..172 | 100 | <- | Minus |
3R | 13379685..13379748 | 1..64 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9199801..9199930 | 1111..1240 | 100 | <- | Minus |
arm_3R | 9200001..9200092 | 1019..1110 | 100 | <- | Minus |
arm_3R | 9198826..9199737 | 1241..2152 | 100 | <- | Minus |
arm_3R | 9200169..9200502 | 685..1018 | 100 | <- | Minus |
arm_3R | 9203255..9203383 | 556..684 | 100 | <- | Minus |
arm_3R | 9204124..9204506 | 173..555 | 100 | <- | Minus |
arm_3R | 9204725..9204832 | 65..172 | 100 | <- | Minus |
arm_3R | 9205407..9205470 | 1..64 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13119233..13119615 | 173..555 | 100 | <- | Minus |
3R | 13119834..13119941 | 65..172 | 100 | <- | Minus |
3R | 13120516..13120579 | 1..64 | 100 | Minus | |
3R | 13113935..13114846 | 1241..2152 | 100 | <- | Minus |
3R | 13114910..13115039 | 1111..1240 | 100 | <- | Minus |
3R | 13115110..13115201 | 1019..1110 | 100 | <- | Minus |
3R | 13115278..13115611 | 685..1018 | 100 | <- | Minus |
3R | 13118364..13118492 | 556..684 | 100 | <- | Minus |
Translation from 84 to 1358
> GH23935.pep MATRNLLAILLLASICMTQAYPALLPYIYNPSKRSGDTAFPQIEDDVSEL DQLRNEPGAVMAKRQHDGSTARTTTTTKESVEEVAAVPEPGAQPNANIMP DLERQLEVATPLISTTTTTSTSATTTTATSKEEGERSQLEEPKTQIKTVV EPTAHAKNAKSFLRSPNGQYSSFDMAQYIFWTGDETAVVKAVEELVEGKV ITRESALKFLQDIRLGIEFLQRSYANRIFPEEVRQNQLKRHSPAITTPPA STTTTTTTSTTTTTEKPFPAVHESGSESGIERGAAGVLPAKSFDSFTFWN KLKVLDSEAQQDLNDYDEGRAKIVEYLYNEYSLEEILYKLAKVMFAQSLS HGSDEAQMELQKLTEFLEREGNMGVIPIDLQKKVLRVLLSALSDTLTEHP EFLPAARVNLANPFYRLPIHAPSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17388-PA | 553 | GF17388-PA | 289..553 | 158..424 | 1165 | 87.6 | Plus |
Dana\GF17388-PA | 553 | GF17388-PA | 1..170 | 1..169 | 583 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17060-PA | 556 | GG17060-PA | 284..556 | 152..424 | 1313 | 96.7 | Plus |
Dere\GG17060-PA | 556 | GG17060-PA | 1..157 | 1..157 | 604 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18549-PA | 564 | GH18549-PA | 294..562 | 152..423 | 987 | 74.5 | Plus |
Dgri\GH18549-PA | 564 | GH18549-PA | 1..171 | 1..169 | 416 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9813-PC | 424 | CG9813-PC | 1..424 | 1..424 | 2141 | 100 | Plus |
CG9813-PF | 424 | CG9813-PF | 1..424 | 1..424 | 2141 | 100 | Plus |
CG9813-PG | 567 | CG9813-PG | 191..567 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PD | 556 | CG9813-PD | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PA | 556 | CG9813-PA | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PB | 556 | CG9813-PB | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PE | 556 | CG9813-PE | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PG | 567 | CG9813-PG | 1..183 | 1..185 | 791 | 87.6 | Plus |
CG9813-PD | 556 | CG9813-PD | 1..169 | 1..169 | 786 | 94.7 | Plus |
CG9813-PA | 556 | CG9813-PA | 1..169 | 1..169 | 786 | 94.7 | Plus |
CG9813-PB | 556 | CG9813-PB | 1..169 | 1..169 | 786 | 94.7 | Plus |
CG9813-PE | 556 | CG9813-PE | 1..169 | 1..169 | 786 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23248-PA | 546 | GI23248-PA | 280..546 | 152..424 | 983 | 73.9 | Plus |
Dmoj\GI23248-PA | 546 | GI23248-PA | 1..169 | 1..169 | 387 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23068-PA | 567 | GL23068-PA | 298..567 | 152..424 | 1100 | 82.1 | Plus |
Dper\GL23068-PA | 567 | GL23068-PA | 1..173 | 1..169 | 504 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22053-PB | 420 | GA22053-PB | 1..420 | 1..424 | 1587 | 79.8 | Plus |
Dpse\GA22053-PA | 563 | GA22053-PA | 294..563 | 152..424 | 1098 | 81.8 | Plus |
Dpse\GA22053-PA | 563 | GA22053-PA | 1..173 | 1..169 | 504 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25945-PA | 556 | GM25945-PA | 284..556 | 152..424 | 1323 | 97.4 | Plus |
Dsec\GM25945-PA | 556 | GM25945-PA | 1..157 | 1..157 | 628 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20505-PA | 556 | GD20505-PA | 284..556 | 152..424 | 1323 | 97.1 | Plus |
Dsim\GD20505-PA | 556 | GD20505-PA | 1..157 | 1..157 | 628 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10745-PA | 559 | GJ10745-PA | 294..559 | 152..424 | 1010 | 74.2 | Plus |
Dvir\GJ10745-PA | 559 | GJ10745-PA | 1..172 | 1..169 | 413 | 60.7 | Plus |
Translation from 84 to 1358
> GH23935.hyp MATRNLLAILLLASICMTQAYPALLPYIYNPSKRSGDTAFPQIEDDVSEL DQLRNEPGAVMAKRQHDGSTARTTTTTKESVEEVAAVPEPGAQPNANIMP DLERQLEVATPLISTTTTTSTSATTTTATSKEEGERSQLEEPKTQIKTVV EPTAHAKNAKSFLRSPNGQYSSFDMAQYIFWTGDETAVVKAVEELVEGKV ITRESALKFLQDIRLGIEFLQRSYANRIFPEEVRQNQLKRHSPAITTPPA STTTTTTTSTTTTTEKPFPAVHESGSESGIERGAAGVLPAKSFDSFTFWN KLKVLDSEAQQDLNDYDEGRAKIVEYLYNEYSLEEILYKLAKVMFAQSLS HGSDEAQMELQKLTEFLEREGNMGVIPIDLQKKVLRVLLSALSDTLTEHP EFLPAARVNLANPFYRLPIHAPSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9813-PC | 424 | CG9813-PC | 1..424 | 1..424 | 2141 | 100 | Plus |
CG9813-PF | 424 | CG9813-PF | 1..424 | 1..424 | 2141 | 100 | Plus |
CG9813-PD | 556 | CG9813-PD | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PA | 556 | CG9813-PA | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PB | 556 | CG9813-PB | 180..556 | 69..424 | 1391 | 77.2 | Plus |
CG9813-PD | 556 | CG9813-PD | 1..169 | 1..169 | 786 | 94.7 | Plus |
CG9813-PA | 556 | CG9813-PA | 1..169 | 1..169 | 786 | 94.7 | Plus |