Clone GH24078 Report

Search the DGRC for GH24078

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:240
Well:78
Vector:pOT2
Associated Gene/TranscriptCG3857-RA
Protein status:GH24078.pep: gold
Preliminary Size:2187
Sequenced Size:2327

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3857 2001-01-01 Release 2 assignment
CG3857 2001-07-04 Blastp of sequenced clone
CG3857 2008-04-29 Release 5.5 accounting
CG3857 2008-08-15 Release 5.9 accounting
CG3857 2008-12-18 5.12 accounting

Clone Sequence Records

GH24078.complete Sequence

2327 bp (2327 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051600

> GH24078.complete
TTCAAACCGATTTAAATTTAGTCAAATATAAACCCCAAATAACCGGCTTC
CGAATGGCTGATCCCCGTCGTCGTTTCCGTAACAAAAAGCGGGATGAAGC
CTGCTCCGGCCTCCTGGCACCCGTGACCATCGCCCGGCGCGAGGACGCCG
CCCGCATGATGCAGCCAAAAATTCTGCTAAAGAAGGATCGCGATCGGGAG
CAAGAGACCTGGGACAGAGAGCGGGACAAGGATAGGAAGCTGGAGAGGGA
CAGGGAGGCGGAGCCAAGTCCCAGTTGTTACCCCGATACACCGCCGGCCC
TCAAAACGATGATCGTCAATCGTACGGGTGAGGTGCGGCCTGCAGACAGA
TGCCAGATGCCTTTGGCCGGAGGTGCTCTTGTCCAGGGAAGCGGGCAATT
GTCCGCCGTGCCATCCAGCTCCGTTTGCGCCGCATTGGTTAGCTCGGTAC
CAACTAGCAGGGACAAGGGGAGCTGCAGTGGTGGTGCCGGAACAGCTGGC
ACCTCGGCCGGAGCACCGAATGCTCTCCAGGAGCTGCAGCCGCCACGCAT
GAACCGTCCCACACCCCTAATCGTGGCCAATGGTATTTTTAATGCCAATG
CCCGCAAGCTCTTCCACAAAACCAATACGGACTTCACCGTAATCGGGGTC
CTGGGTGGTCAGAGTTCCGGAAAAAGCACGCTGCTCAATCTTCTGGCCGC
AGAGCGGTCCCTGGACTACGACTACTATCAACATCTATTCTCTCCAGAGG
CGGATGAATGCATCTTTGCCACGCGTCACAAGTTGAAGCCGAACAATGGG
CAGAAGAGCATTTTGCGTCCTCGCACGGAAACCCTGCAGTTTTTTATCAC
CCGGGAACGTCACATACTGCTGGACACACCACCGTTAATGCCTGTAGGCA
AGGACTCGGATCACCAGGATCTTTACTCCCTGGGCACCATGGCGCAACTG
TTGAGTGTATGCCATATATTAATTTTAGTCATCGATGGCTTGGCCTTGGA
ACAATTGCGTCTGATAAACGCTGCCCTTCGCCTGAGACCGACGCTTCATT
GCAAAGGCTATGTACGGGATCACATGCCGCAGGTAGTATTCGTCCGCGCG
CGTGCCCATCGAATAGACTTTGAGATACAGCAGCGGGAACGACTGGACAA
AAAGTTGGCCTACTTATACGGGCCGACGGGGCTGCCCATATACCGGGGAA
GAGGCGATGCACGGTGCTTAAACACCTTCCTCCTGCCGGAGGTGAGTAGC
AACAAAGCCACCGCTTTCCATTCCTGCCTCGGCGAACTGGTGCGTCAGTT
CCGAGAACGTATCCTCGGATGCACGCGCATCTCTATGTGCCACACCAGCA
CCGAACTCAGTGAGGCCATCTGGTTTGAGATCCTGGCCGAAAGTGCTCGC
AAGGCGGCTCCTCATTTCGAAAAGATCTACGCAGAGATCAAGTTGCGCCA
CCTGGACACACGCTGCCAGTGGCGATCGGACAATTGGCGCACGTTCTCTT
CCAATGCCGAAAGCTGATCCACAGATTGTAAGTACGCGGTTGGTATAAAA
CTATGCAAGTGGGTGAAGCGGCTTGGACTGGGATACGCAGTCCTGAATCA
TTCAAGTGATTCAAGTTCCAGTGGCAATGTTTACCTATCCTTTTATTAAT
GACACGTGCAGTGTTATGGCCAATATGTTTAGCTGAATACCGACCGACAT
CAAGTCTTTTTTTTAAAGGAGGTGTTTAAAGTTAACATATGAATCAGAAG
TTGAGATAGTGACTGATATACATATTGTTTTACAGACATATCCCTAATTA
ATAAAAGACTTCAAAAATAATTGTATAGCATTTACAAAGAATAGTATTTA
CATTTTGGAGTTTAGGCTTAACGATTATCCATTTTTATCAGCCGATTATT
AAAGTTAAGAACCCTCTTCTTGCGCTCTTCGTCAGGACTCACCAGCGCTC
GGCTCTCGTGTTTTCGGGCCCCGTCAGCAGGCGACTCGGGGCCTGTCTAG
TAACATGTTCGTGTAAGTTACGAACCCTCTTCTTGCGATCTTCGTCAGGA
CTCACCAGCGCTCGGCTCTCGTGTTTTCGGGCCCCGTCAGCAGGCGACTC
GGGGCCTGTCTAGGAACATGTTTGTGTATGTGTGCATTCGGAACAAGTGC
CGTTGGTCGCACTCAGGGTGAGGGGTCAACGGGGGAAGCGGATATAAAAG
CAGCGGGGCGGGAGAAGAGGCCCAGTCTCGAACGGACACATAACGGAACC
GCTAGCAGATCGCGAACTGAATCTTAAAATAAAGCTAATCGTAAACTCGA
ACCCTCTTAAAAAAAAAAAAAAAAAAA

GH24078.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3857-RA 2310 CG3857-RA 1..2310 1..2310 11550 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1831546..1833853 2308..1 11495 99.9 Minus
chrX 22417052 chrX 14449284..14449690 2308..1902 2035 100 Minus
chrX 22417052 chrX 1824549..1824954 2308..1903 2030 100 Minus
chrX 22417052 chrX 14442199..14442604 2308..1903 2030 100 Minus
chrX 22417052 chrX 3072180..3072586 1902..2308 2020 99.8 Plus
chr3R 27901430 chr3R 19681731..19682137 2308..1902 2020 99.8 Minus
chr2R 21145070 chr2R 9615505..9615911 1902..2308 2020 99.8 Plus
chrX 22417052 chrX 3079270..3079675 1903..2308 2015 99.8 Plus
chr3R 27901430 chr3R 19674638..19675043 2308..1903 2015 99.8 Minus
chr2R 21145070 chr2R 9622589..9622994 1903..2308 2015 99.8 Plus
chr3L 24539361 chr3L 17910384..17910790 2308..1902 2005 99.5 Minus
chr3L 24539361 chr3L 17908155..17908560 2308..1903 2000 99.5 Minus
chr2L 23010047 chr2L 10598886..10599300 2308..1895 1995 99.3 Minus
chr2R 21145070 chr2R 2839608..2840015 1902..2308 1990 99.8 Plus
chr2L 23010047 chr2L 4668118..4668525 2308..1902 1990 99.8 Minus
chr2L 23010047 chr2L 14983238..14983645 1902..2308 1990 99.8 Plus
chr3R 27901430 chr3R 13857206..13857618 1897..2308 1985 99.3 Plus
chr2R 21145070 chr2R 2846614..2847020 1903..2308 1985 99.8 Plus
chr2L 23010047 chr2L 4661113..4661519 2308..1903 1985 99.8 Minus
chr2L 23010047 chr2L 14990244..14990650 1903..2308 1985 99.8 Plus
chrU 10048995 chrU 8520773..8521179 1903..2308 1985 99.8 Plus
chrU 10048995 chrU 8986910..8987322 2308..1897 1985 99.3 Minus
chr2L 23010047 chr2L 2119107..2119518 2308..1898 1980 99.3 Minus
chrU 10048995 chrU 8964231..8964645 2308..1895 1980 99 Minus
chr3R 27901430 chr3R 16336968..16337375 1902..2308 1975 99.5 Plus
chr2L 23010047 chr2L 17150264..17150671 2308..1902 1975 99.5 Minus
chr2L 23010047 chr2L 19663383..19663790 2308..1902 1975 99.5 Minus
chrU 10048995 chrU 2789803..2790210 2308..1902 1975 99.5 Minus
chrU 10048995 chrU 5215497..5215904 1902..2308 1975 99.5 Plus
chrU 10048995 chrU 9203458..9203865 2308..1902 1975 99.5 Minus
chr3LHet 2555433 chr3LHet 85738..86145 1902..2308 1975 99.5 Plus
chr3LHet 2555433 chr3LHet 151583..151990 2308..1902 1975 99.5 Minus
chr3R 27901430 chr3R 13864310..13864716 1903..2308 1970 99.5 Plus
chr3R 27901430 chr3R 16339097..16339503 1903..2308 1970 99.5 Plus
chr3L 24539361 chr3L 15416153..15416559 1903..2308 1970 99.5 Plus
chr2L 23010047 chr2L 2112020..2112426 2308..1903 1970 99.5 Minus
chr2L 23010047 chr2L 10591799..10592205 2308..1903 1970 99.5 Minus
chr2L 23010047 chr2L 17143171..17143577 2308..1903 1970 99.5 Minus
chr2L 23010047 chr2L 19656292..19656698 2308..1903 1970 99.5 Minus
chrU 10048995 chrU 2783234..2783640 2308..1903 1970 99.5 Minus
chrU 10048995 chrU 5222857..5223263 1903..2308 1970 99.5 Plus
chrU 10048995 chrU 6085944..6086350 2308..1903 1970 99.5 Minus
chrU 10048995 chrU 8673145..8673551 1903..2308 1970 99.5 Plus
chr3LHet 2555433 chr3LHet 125137..125543 1903..2308 1970 99.5 Plus
chr2R 21145070 chr2R 1267459..1267873 1895..2308 1965 98.8 Plus
chr2R 21145070 chr2R 7303072..7303477 1904..2308 1965 99.5 Plus
chr3L 24539361 chr3L 23361116..23361530 1895..2308 1965 98.8 Plus
chr2RHet 3288813 chr2RHet 2204794..2205202 1901..2308 1965 99.3 Plus
chr2R 21145070 chr2R 1274557..1274963 1903..2308 1955 99.3 Plus
chrU 10048995 chrU 3313527..3313933 1903..2308 1955 99.3 Plus
chr2RHet 3288813 chr2RHet 2211889..2212295 1903..2308 1955 99.3 Plus
chr3L 24539361 chr3L 22792674..22793081 1902..2308 1945 99 Plus
chr3L 24539361 chr3L 23381302..23381709 2308..1902 1945 99 Minus
chr3L 24539361 chr3L 24261046..24261453 1902..2308 1945 99 Plus
chrU 10048995 chrU 1450086..1450493 2308..1902 1945 99 Minus
chrU 10048995 chrU 2096759..2097166 2308..1902 1945 99 Minus
chrU 10048995 chrU 2246520..2246927 1902..2308 1945 99 Plus
chr3L 24539361 chr3L 22799764..22800170 1903..2308 1940 99 Plus
chr3L 24539361 chr3L 23374202..23374608 2308..1903 1940 99 Minus
chr3L 24539361 chr3L 24268139..24268545 1903..2308 1940 99 Plus
chrU 10048995 chrU 1442995..1443401 2308..1903 1940 99 Minus
chrU 10048995 chrU 9888125..9888515 1919..2308 1890 99.5 Plus
chrU 10048995 chrU 10047995..10048371 1933..2308 1820 99.5 Plus
chrU 10048995 chrU 6014241..6014575 1902..2236 1660 99.7 Plus
chrU 10048995 chrU 2253620..2253957 1903..2239 1595 98.8 Plus
chrU 10048995 chrU 8915568..8915871 2205..1902 1520 100 Minus
chr3LHet 2555433 chr3LHet 108676..108987 2214..1902 1500 99.4 Minus
chr3L 24539361 chr3L 15413882..15414177 2014..2308 1400 99 Plus
chr2R 21145070 chr2R 17037632..17037927 2014..2308 1385 98.6 Plus
chr2R 21145070 chr2R 7305758..7306051 2016..2308 1375 98.6 Plus
chr2R 21145070 chr2R 17039805..17040098 2016..2308 1375 98.6 Plus
chr3L 24539361 chr3L 23368226..23368519 2016..2308 1375 98.6 Plus
chrU 10048995 chrU 9896266..9896559 2016..2308 1375 98.6 Plus
chr2R 21145070 chr2R 15958669..15958928 2308..2049 1300 100 Minus
chr2R 21145070 chr2R 15956577..15956836 2308..2049 1300 100 Minus
chrU 10048995 chrU 9271756..9271968 2097..2308 1000 99.1 Plus
chrYHet 347003 chrYHet 134701..134891 2092..1902 955 100 Minus
chr2R 21145070 chr2R 15958928..15959040 2013..1901 565 100 Minus
chr2R 21145070 chr2R 15956836..15956946 2013..1903 555 100 Minus
chr2R 21145070 chr2R 17037633..17037746 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 23374383..23374496 2015..1902 540 98.2 Minus
chr3L 24539361 chr3L 15413883..15413996 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 22792787..22792900 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 22799876..22799989 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 23361236..23361349 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 23381483..23381596 2015..1902 540 98.2 Minus
chr3L 24539361 chr3L 24261159..24261272 1902..2015 540 98.2 Plus
chr3L 24539361 chr3L 24268251..24268364 1902..2015 540 98.2 Plus
chrU 10048995 chrU 1443176..1443289 2015..1902 540 98.2 Minus
chrU 10048995 chrU 1450267..1450380 2015..1902 540 98.2 Minus
chrU 10048995 chrU 2096940..2097053 2015..1902 540 98.2 Minus
chrU 10048995 chrU 2246633..2246746 1902..2015 540 98.2 Plus
chrU 10048995 chrU 2253732..2253845 1902..2015 540 98.2 Plus
chr2R 21145070 chr2R 7305758..7305870 1903..2015 535 98.2 Plus
chr2R 21145070 chr2R 17039805..17039917 1903..2015 535 98.2 Plus
chr3L 24539361 chr3L 23368226..23368338 1903..2015 535 98.2 Plus
chrU 10048995 chrU 5215490..5215610 2008..2128 530 95.9 Plus
chr3R 27901430 chr3R 19682024..19682140 2128..2012 525 96.6 Minus
chr2L 23010047 chr2L 4668412..4668528 2128..2012 525 96.6 Minus
chr2L 23010047 chr2L 17150558..17150674 2128..2012 525 96.6 Minus
chr2L 23010047 chr2L 19663677..19663793 2128..2012 525 96.6 Minus
chrU 10048995 chrU 9896266..9896378 1903..2015 520 97.3 Plus
chrX 22417052 chrX 3072179..3072293 2014..2128 515 96.5 Plus
chrX 22417052 chrX 14449577..14449691 2128..2014 515 96.5 Minus
chr2R 21145070 chr2R 2839607..2839721 2014..2128 515 96.5 Plus
chr2R 21145070 chr2R 1267465..1267579 2014..2128 515 96.5 Plus
chr2R 21145070 chr2R 9615504..9615618 2014..2128 515 96.5 Plus
chr3L 24539361 chr3L 17910677..17910791 2128..2014 515 96.5 Minus
chr3L 24539361 chr3L 23381596..23381710 2128..2014 515 96.5 Minus
chr3L 24539361 chr3L 24261045..24261159 2014..2128 515 96.5 Plus
chr2L 23010047 chr2L 2119401..2119515 2128..2014 515 96.5 Minus
chr2L 23010047 chr2L 14983237..14983351 2014..2128 515 96.5 Plus
chrU 10048995 chrU 8964525..8964639 2128..2014 515 96.5 Minus
chrU 10048995 chrU 1450380..1450494 2128..2014 515 96.5 Minus
chrU 10048995 chrU 2097053..2097167 2128..2014 515 96.5 Minus
chrU 10048995 chrU 2246519..2246633 2014..2128 515 96.5 Plus
chrU 10048995 chrU 2790097..2790211 2128..2014 515 96.5 Minus
chrU 10048995 chrU 6014240..6014354 2014..2128 515 96.5 Plus
chrU 10048995 chrU 8915758..8915872 2128..2014 515 96.5 Minus
chr3LHet 2555433 chr3LHet 85737..85851 2014..2128 515 96.5 Plus
chr3LHet 2555433 chr3LHet 108874..108988 2128..2014 515 96.5 Minus
chr3LHet 2555433 chr3LHet 151877..151991 2128..2014 515 96.5 Minus
chrX 22417052 chrX 1824729..1824842 2015..1902 510 96.5 Minus
chrX 22417052 chrX 1831726..1831839 2015..1902 510 96.5 Minus
chrX 22417052 chrX 1831839..1831952 2128..2015 510 96.5 Minus
chrX 22417052 chrX 3072293..3072406 1902..2015 510 96.5 Plus
chrX 22417052 chrX 3079382..3079495 1902..2015 510 96.5 Plus
chrX 22417052 chrX 14442379..14442492 2015..1902 510 96.5 Minus
chrX 22417052 chrX 14449464..14449577 2015..1902 510 96.5 Minus
chr3R 27901430 chr3R 13857211..13857324 2015..2128 510 96.5 Plus
chr3R 27901430 chr3R 13857324..13857437 1902..2015 510 96.5 Plus
chr3R 27901430 chr3R 13864422..13864535 1902..2015 510 96.5 Plus
chr3R 27901430 chr3R 16336968..16337081 2015..2128 510 96.5 Plus
chr3R 27901430 chr3R 19674818..19674931 2015..1902 510 96.5 Minus
chr3R 27901430 chr3R 19681911..19682024 2015..1902 510 96.5 Minus
chr2R 21145070 chr2R 2846726..2846839 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 7303183..7303296 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 9615618..9615731 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 1267579..1267692 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 1274669..1274782 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 2839721..2839834 1902..2015 510 96.5 Plus
chr2R 21145070 chr2R 9622701..9622814 1902..2015 510 96.5 Plus
chr3L 24539361 chr3L 17908335..17908448 2015..1902 510 96.5 Minus
chr3L 24539361 chr3L 17910564..17910677 2015..1902 510 96.5 Minus
chr3L 24539361 chr3L 22792674..22792787 2015..2128 510 96.5 Plus
chr3L 24539361 chr3L 23361123..23361236 2015..2128 510 96.5 Plus
chr2L 23010047 chr2L 2112201..2112314 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 2119288..2119401 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 4661294..4661407 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 4668299..4668412 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 10591980..10592093 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 10599067..10599180 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 10599180..10599293 2128..2015 510 96.5 Minus
chr2L 23010047 chr2L 14983351..14983464 1902..2015 510 96.5 Plus
chr2L 23010047 chr2L 14990356..14990469 1902..2015 510 96.5 Plus
chr2L 23010047 chr2L 17143352..17143465 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 17150445..17150558 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 19656473..19656586 2015..1902 510 96.5 Minus
chr2L 23010047 chr2L 19663564..19663677 2015..1902 510 96.5 Minus
chrU 10048995 chrU 2783415..2783528 2015..1902 510 96.5 Minus
chrU 10048995 chrU 2789984..2790097 2015..1902 510 96.5 Minus
chrU 10048995 chrU 3313639..3313752 1902..2015 510 96.5 Plus
chrU 10048995 chrU 5215610..5215723 1902..2015 510 96.5 Plus
chrU 10048995 chrU 5222969..5223082 1902..2015 510 96.5 Plus
chrU 10048995 chrU 6014354..6014467 1902..2015 510 96.5 Plus
chrU 10048995 chrU 6086125..6086238 2015..1902 510 96.5 Minus
chrU 10048995 chrU 8520885..8520998 1902..2015 510 96.5 Plus
chrU 10048995 chrU 8673257..8673370 1902..2015 510 96.5 Plus
chrU 10048995 chrU 8915645..8915758 2015..1902 510 96.5 Minus
chrU 10048995 chrU 8964412..8964525 2015..1902 510 96.5 Minus
chrU 10048995 chrU 8987091..8987204 2015..1902 510 96.5 Minus
chrU 10048995 chrU 8987204..8987317 2128..2015 510 96.5 Minus
chrU 10048995 chrU 9203639..9203752 2015..1902 510 96.5 Minus
chr3LHet 2555433 chr3LHet 85851..85964 1902..2015 510 96.5 Plus
chr3LHet 2555433 chr3LHet 108761..108874 2015..1902 510 96.5 Minus
chr3LHet 2555433 chr3LHet 125249..125362 1902..2015 510 96.5 Plus
chr3LHet 2555433 chr3LHet 151764..151877 2015..1902 510 96.5 Minus
chr2RHet 3288813 chr2RHet 2204795..2204908 2015..2128 510 96.5 Plus
chr2RHet 3288813 chr2RHet 2204908..2205021 1902..2015 510 96.5 Plus
chr2RHet 3288813 chr2RHet 2212001..2212114 1902..2015 510 96.5 Plus
chrYHet 347003 chrYHet 134778..134891 2128..2015 510 96.5 Minus
chrX 22417052 chrX 1824842..1824954 2128..2016 505 96.5 Minus
chrX 22417052 chrX 3079270..3079382 2016..2128 505 96.5 Plus
chrX 22417052 chrX 14442492..14442604 2128..2016 505 96.5 Minus
chr3R 27901430 chr3R 13864310..13864422 2016..2128 505 96.5 Plus
chr3R 27901430 chr3R 16339097..16339209 2016..2128 505 96.5 Plus
chr3R 27901430 chr3R 19674931..19675043 2128..2016 505 96.5 Minus
chr2R 21145070 chr2R 1274557..1274669 2016..2128 505 96.5 Plus
chr2R 21145070 chr2R 2846614..2846726 2016..2128 505 96.5 Plus
chr2R 21145070 chr2R 9622589..9622701 2016..2128 505 96.5 Plus
chr3L 24539361 chr3L 15416153..15416265 2016..2128 505 96.5 Plus
chr3L 24539361 chr3L 17908448..17908560 2128..2016 505 96.5 Minus
chr3L 24539361 chr3L 22799764..22799876 2016..2128 505 96.5 Plus
chr3L 24539361 chr3L 23374496..23374608 2128..2016 505 96.5 Minus
chr3L 24539361 chr3L 24268139..24268251 2016..2128 505 96.5 Plus
chr2L 23010047 chr2L 2112314..2112426 2128..2016 505 96.5 Minus
chr2L 23010047 chr2L 4661407..4661519 2128..2016 505 96.5 Minus
chr2L 23010047 chr2L 10592093..10592205 2128..2016 505 96.5 Minus
chr2L 23010047 chr2L 14990244..14990356 2016..2128 505 96.5 Plus
chr2L 23010047 chr2L 17143465..17143577 2128..2016 505 96.5 Minus
chr2L 23010047 chr2L 19656586..19656698 2128..2016 505 96.5 Minus
chr3LHet 2555433 chr3LHet 125137..125249 2016..2128 505 96.5 Plus
chr2RHet 3288813 chr2RHet 2211889..2212001 2016..2128 505 96.5 Plus
chr2R 21145070 chr2R 7303072..7303183 2017..2128 500 96.4 Plus
chr2R 21145070 chr2R 15958928..15959039 2126..2015 500 96.4 Minus
chr3R 27901430 chr3R 16337081..16337188 1902..2009 495 97.2 Plus
chr3R 27901430 chr3R 16339209..16339316 1902..2009 495 97.2 Plus
chr2R 21145070 chr2R 15956836..15956946 2126..2016 495 96.4 Minus
chr3L 24539361 chr3L 15416265..15416378 1902..2015 495 95.6 Plus
chr2R 21145070 chr2R 15956757..15956836 2015..1936 370 97.5 Minus
chr2R 21145070 chr2R 15958849..15958928 2015..1936 370 97.5 Minus
chrYHet 347003 chrYHet 134701..134778 1979..1902 360 97.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:05:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1937698..1940007 2310..1 11550 100 Minus
X 23542271 X 14558893..14559301 2310..1902 2045 100 Minus
X 23542271 X 1930701..1931108 2310..1903 2040 100 Minus
X 23542271 X 14551808..14552215 2310..1903 2040 100 Minus
X 23542271 X 3178522..3178930 1902..2310 2030 99.8 Plus
3R 32079331 3R 23858315..23858723 2310..1902 2030 99.8 Minus
2R 25286936 2R 13728188..13728596 1902..2310 2030 99.8 Plus
X 23542271 X 3185612..3186019 1903..2310 2025 99.8 Plus
3R 32079331 3R 23851222..23851629 2310..1903 2025 99.8 Minus
2R 25286936 2R 13735272..13735679 1903..2310 2025 99.8 Plus
3L 28110227 3L 17920765..17921173 2310..1902 2015 99.5 Minus
3L 28110227 3L 17918536..17918943 2310..1903 2010 99.5 Minus
2L 23513712 2L 10600093..10600509 2310..1895 2005 99.3 Minus
2R 25286936 2R 6952220..6952629 1902..2310 2000 99.8 Plus
2L 23513712 2L 4668994..4669403 2310..1902 2000 99.8 Minus
2L 23513712 2L 14984452..14984861 1902..2310 2000 99.8 Plus
Y 3667352 Y 783294..783703 1902..2310 2000 99.8 Plus
3R 32079331 3R 18032827..18033241 1897..2310 1995 99.3 Plus
2R 25286936 2R 6959226..6959634 1903..2310 1995 99.8 Plus
2L 23513712 2L 4661989..4662397 2310..1903 1995 99.8 Minus
2L 23513712 2L 14991458..14991866 1903..2310 1995 99.8 Plus
Y 3667352 Y 790392..790800 1903..2310 1995 99.8 Plus
U 3151297 U 852286..852700 2310..1897 1995 99.3 Minus
Xmm 1049845 Xmm 163553..163961 1903..2310 1995 99.8 Plus
2L 23513712 2L 2119364..2119777 2310..1898 1990 99.3 Minus
Y 3667352 Y 3153695..3154111 1895..2310 1990 99 Plus
Ymm 880023 Ymm 496606..497022 2310..1895 1990 99 Minus
3R 32079331 3R 20513058..20513467 1902..2310 1985 99.5 Plus
2R 25286936 2R 3234856..3235265 2310..1902 1985 99.5 Minus
2R 25286936 2R 11415572..11415981 1902..2310 1985 99.5 Plus
3L 28110227 3L 24666087..24666496 2310..1902 1985 99.5 Minus
2L 23513712 2L 17151587..17151996 2310..1902 1985 99.5 Minus
2L 23513712 2L 19664880..19665289 2310..1902 1985 99.5 Minus
Y 3667352 Y 747116..747525 1902..2310 1985 99.5 Plus
Y 3667352 Y 2447874..2448283 2310..1902 1985 99.5 Minus
Y 3667352 Y 2901714..2902123 1902..2310 1985 99.5 Plus
Y 3667352 Y 2984845..2985254 2310..1902 1985 99.5 Minus
U 3151297 U 969252..969661 2310..1902 1985 99.5 Minus
2CEN 225573 2CEN 110549..110958 1902..2310 1985 99.5 Plus
3R 32079331 3R 18039931..18040339 1903..2310 1980 99.5 Plus
3R 32079331 3R 20515187..20515595 1903..2310 1980 99.5 Plus
2R 25286936 2R 3227765..3228173 2310..1903 1980 99.5 Minus
3L 28110227 3L 15426085..15426493 1903..2310 1980 99.5 Plus
3L 28110227 3L 24659002..24659410 2310..1903 1980 99.5 Minus
2L 23513712 2L 2112277..2112685 2310..1903 1980 99.5 Minus
2L 23513712 2L 10593006..10593414 2310..1903 1980 99.5 Minus
2L 23513712 2L 17144494..17144902 2310..1903 1980 99.5 Minus
2L 23513712 2L 19657789..19658197 2310..1903 1980 99.5 Minus
Y 3667352 Y 754231..754639 1903..2310 1980 99.5 Plus
Y 3667352 Y 2435129..2435537 2310..1903 1980 99.5 Minus
Y 3667352 Y 2977759..2978167 2310..1903 1980 99.5 Minus
U 3151297 U 1132422..1132830 1903..2310 1980 99.5 Plus
2CEN 225573 2CEN 117909..118317 1903..2310 1980 99.5 Plus
2R 25286936 2R 3392725..3393135 2310..1901 1975 99.3 Minus
2R 25286936 2R 5380049..5380465 1895..2310 1975 98.8 Plus
3L 28110227 3L 23372199..23372615 1895..2310 1975 98.8 Plus
2R 25286936 2R 3385631..3386039 2310..1903 1965 99.3 Minus
2R 25286936 2R 5387147..5387555 1903..2310 1965 99.3 Plus
3L 28110227 3L 26394960..26395376 2310..1895 1960 98.6 Minus
3R 32079331 3R 459027..459436 2310..1902 1955 99 Minus
3R 32079331 3R 3047646..3048055 2310..1902 1955 99 Minus
3L 28110227 3L 22803767..22804176 1902..2310 1955 99 Plus
3L 28110227 3L 23392383..23392792 2310..1902 1955 99 Minus
3L 28110227 3L 24272147..24272556 1902..2310 1955 99 Plus
3L 28110227 3L 25428452..25428861 2310..1902 1955 99 Minus
3R 32079331 3R 451929..452337 2310..1903 1950 99 Minus
3R 32079331 3R 3040547..3040955 2310..1903 1950 99 Minus
3L 28110227 3L 22810857..22811265 1903..2310 1950 99 Plus
3L 28110227 3L 23385283..23385691 2310..1903 1950 99 Minus
3L 28110227 3L 24279240..24279648 1903..2310 1950 99 Plus
3L 28110227 3L 26387863..26388271 2310..1903 1950 99 Minus
Ymm 880023 Ymm 525806..526198 1919..2310 1900 99.5 Plus
U 3151297 U 1074332..1074710 1933..2310 1830 99.5 Plus
Xmm 1049845 Xmm 70290..70593 2205..1902 1520 100 Minus
3L 28110227 3L 15423814..15424111 2014..2310 1410 99 Plus
2R 25286936 2R 21151170..21151467 2014..2310 1395 98.7 Plus
2R 25286936 2R 11418260..11418555 2016..2310 1385 98.6 Plus
2R 25286936 2R 21153343..21153638 2016..2310 1385 98.6 Plus
3L 28110227 3L 23379309..23379604 2016..2310 1385 98.6 Plus
Y 3667352 Y 3160704..3160999 2016..2310 1385 98.6 Plus
U 3151297 U 1198666..1198961 2016..2310 1385 98.6 Plus
2R 25286936 2R 20069408..20069669 2310..2049 1310 100 Minus
2R 25286936 2R 20071500..20071761 2310..2049 1310 100 Minus
Y 3667352 Y 861426..861650 2087..2310 1060 99.1 Plus
Y 3667352 Y 650491..650681 2092..1902 955 100 Minus
2R 25286936 2R 20071761..20071873 2013..1901 565 100 Minus
2R 25286936 2R 20069669..20069779 2013..1903 555 100 Minus
3R 32079331 3R 3040730..3040843 2015..1902 540 98.2 Minus
3R 32079331 3R 3047829..3047942 2015..1902 540 98.2 Minus
3R 32079331 3R 452112..452225 2015..1902 540 98.2 Minus
3R 32079331 3R 459210..459323 2015..1902 540 98.2 Minus
2R 25286936 2R 21151171..21151284 1902..2015 540 98.2 Plus
3L 28110227 3L 22803880..22803993 1902..2015 540 98.2 Plus
3L 28110227 3L 22810969..22811082 1902..2015 540 98.2 Plus
3L 28110227 3L 23372319..23372432 1902..2015 540 98.2 Plus
3L 28110227 3L 23385466..23385579 2015..1902 540 98.2 Minus
3L 28110227 3L 23392566..23392679 2015..1902 540 98.2 Minus
3L 28110227 3L 15423815..15423928 1902..2015 540 98.2 Plus
3L 28110227 3L 24272260..24272373 1902..2015 540 98.2 Plus
3L 28110227 3L 24279352..24279465 1902..2015 540 98.2 Plus
3L 28110227 3L 25428635..25428748 2015..1902 540 98.2 Minus
3L 28110227 3L 26388046..26388159 2015..1902 540 98.2 Minus
3L 28110227 3L 26395143..26395256 2015..1902 540 98.2 Minus
2R 25286936 2R 11418260..11418372 1903..2015 535 98.2 Plus
2R 25286936 2R 21153343..21153455 1903..2015 535 98.2 Plus
3L 28110227 3L 23379309..23379421 1903..2015 535 98.2 Plus
2R 25286936 2R 3235152..3235272 2128..2008 530 95.9 Minus
2CEN 225573 2CEN 110542..110662 2008..2128 530 95.9 Plus
3R 32079331 3R 23858610..23858726 2128..2012 525 96.6 Minus
2L 23513712 2L 19665176..19665292 2128..2012 525 96.6 Minus
2L 23513712 2L 4669290..4669406 2128..2012 525 96.6 Minus
2L 23513712 2L 17151883..17151999 2128..2012 525 96.6 Minus
Y 3667352 Y 3160704..3160810 1903..2009 520 99.1 Plus
U 3151297 U 1198666..1198778 1903..2015 520 97.3 Plus
X 23542271 X 3178521..3178635 2014..2128 515 96.5 Plus
X 23542271 X 14559188..14559302 2128..2014 515 96.5 Minus
3R 32079331 3R 459323..459437 2128..2014 515 96.5 Minus
3R 32079331 3R 3047942..3048056 2128..2014 515 96.5 Minus
2R 25286936 2R 13728187..13728301 2014..2128 515 96.5 Plus
2R 25286936 2R 5380055..5380169 2014..2128 515 96.5 Plus
2R 25286936 2R 6952219..6952333 2014..2128 515 96.5 Plus
2R 25286936 2R 11415571..11415685 2014..2128 515 96.5 Plus
3L 28110227 3L 17921060..17921174 2128..2014 515 96.5 Minus
3L 28110227 3L 23392679..23392793 2128..2014 515 96.5 Minus
3L 28110227 3L 24272146..24272260 2014..2128 515 96.5 Plus
3L 28110227 3L 24666383..24666497 2128..2014 515 96.5 Minus
3L 28110227 3L 25428748..25428862 2128..2014 515 96.5 Minus
3L 28110227 3L 26395256..26395370 2128..2014 515 96.5 Minus
2L 23513712 2L 2119660..2119774 2128..2014 515 96.5 Minus
2L 23513712 2L 14984451..14984565 2014..2128 515 96.5 Plus
Y 3667352 Y 747115..747229 2014..2128 515 96.5 Plus
Y 3667352 Y 783293..783407 2014..2128 515 96.5 Plus
Y 3667352 Y 2448170..2448284 2128..2014 515 96.5 Minus
Y 3667352 Y 3153701..3153815 2014..2128 515 96.5 Plus
Xmm 1049845 Xmm 70480..70594 2128..2014 515 96.5 Minus
Ymm 880023 Ymm 496902..497016 2128..2014 515 96.5 Minus
X 23542271 X 1930883..1930996 2015..1902 510 96.5 Minus
X 23542271 X 1937880..1937993 2015..1902 510 96.5 Minus
X 23542271 X 1937993..1938106 2128..2015 510 96.5 Minus
X 23542271 X 3178635..3178748 1902..2015 510 96.5 Plus
X 23542271 X 3185724..3185837 1902..2015 510 96.5 Plus
X 23542271 X 14551990..14552103 2015..1902 510 96.5 Minus
X 23542271 X 14559075..14559188 2015..1902 510 96.5 Minus
3R 32079331 3R 18032832..18032945 2015..2128 510 96.5 Plus
3R 32079331 3R 18032945..18033058 1902..2015 510 96.5 Plus
3R 32079331 3R 18040043..18040156 1902..2015 510 96.5 Plus
3R 32079331 3R 20513058..20513171 2015..2128 510 96.5 Plus
3R 32079331 3R 23851404..23851517 2015..1902 510 96.5 Minus
3R 32079331 3R 23858497..23858610 2015..1902 510 96.5 Minus
2R 25286936 2R 6952333..6952446 1902..2015 510 96.5 Plus
2R 25286936 2R 6959338..6959451 1902..2015 510 96.5 Plus
2R 25286936 2R 11415685..11415798 1902..2015 510 96.5 Plus
2R 25286936 2R 13728301..13728414 1902..2015 510 96.5 Plus
2R 25286936 2R 13735384..13735497 1902..2015 510 96.5 Plus
2R 25286936 2R 3227948..3228061 2015..1902 510 96.5 Minus
2R 25286936 2R 3235039..3235152 2015..1902 510 96.5 Minus
2R 25286936 2R 3385814..3385927 2015..1902 510 96.5 Minus
2R 25286936 2R 3392908..3393021 2015..1902 510 96.5 Minus
2R 25286936 2R 3393021..3393134 2128..2015 510 96.5 Minus
2R 25286936 2R 5380169..5380282 1902..2015 510 96.5 Plus
2R 25286936 2R 5387259..5387372 1902..2015 510 96.5 Plus
3L 28110227 3L 17918718..17918831 2015..1902 510 96.5 Minus
3L 28110227 3L 17920947..17921060 2015..1902 510 96.5 Minus
3L 28110227 3L 22803767..22803880 2015..2128 510 96.5 Plus
3L 28110227 3L 23372206..23372319 2015..2128 510 96.5 Plus
3L 28110227 3L 24659185..24659298 2015..1902 510 96.5 Minus
3L 28110227 3L 24666270..24666383 2015..1902 510 96.5 Minus
2L 23513712 2L 2112460..2112573 2015..1902 510 96.5 Minus
2L 23513712 2L 2119547..2119660 2015..1902 510 96.5 Minus
2L 23513712 2L 4662172..4662285 2015..1902 510 96.5 Minus
2L 23513712 2L 4669177..4669290 2015..1902 510 96.5 Minus
2L 23513712 2L 10593189..10593302 2015..1902 510 96.5 Minus
2L 23513712 2L 10600276..10600389 2015..1902 510 96.5 Minus
2L 23513712 2L 10600389..10600502 2128..2015 510 96.5 Minus
2L 23513712 2L 14984565..14984678 1902..2015 510 96.5 Plus
2L 23513712 2L 14991570..14991683 1902..2015 510 96.5 Plus
2L 23513712 2L 17144677..17144790 2015..1902 510 96.5 Minus
2L 23513712 2L 17151770..17151883 2015..1902 510 96.5 Minus
2L 23513712 2L 19657972..19658085 2015..1902 510 96.5 Minus
2L 23513712 2L 19665063..19665176 2015..1902 510 96.5 Minus
Y 3667352 Y 2901827..2901940 1902..2015 510 96.5 Plus
Y 3667352 Y 650568..650681 2128..2015 510 96.5 Minus
Y 3667352 Y 747229..747342 1902..2015 510 96.5 Plus
Y 3667352 Y 754343..754456 1902..2015 510 96.5 Plus
Y 3667352 Y 783407..783520 1902..2015 510 96.5 Plus
Y 3667352 Y 790504..790617 1902..2015 510 96.5 Plus
Y 3667352 Y 2435312..2435425 2015..1902 510 96.5 Minus
Y 3667352 Y 2448057..2448170 2015..1902 510 96.5 Minus
Y 3667352 Y 2901714..2901827 2015..2128 510 96.5 Plus
Y 3667352 Y 2977942..2978055 2015..1902 510 96.5 Minus
Y 3667352 Y 2985028..2985141 2015..1902 510 96.5 Minus
Y 3667352 Y 2985141..2985254 2128..2015 510 96.5 Minus
U 3151297 U 852469..852582 2015..1902 510 96.5 Minus
U 3151297 U 852582..852695 2128..2015 510 96.5 Minus
U 3151297 U 969435..969548 2015..1902 510 96.5 Minus
U 3151297 U 969548..969661 2128..2015 510 96.5 Minus
U 3151297 U 1074414..1074527 1902..2015 510 96.5 Plus
U 3151297 U 1132534..1132647 1902..2015 510 96.5 Plus
Xmm 1049845 Xmm 70367..70480 2015..1902 510 96.5 Minus
Xmm 1049845 Xmm 163665..163778 1902..2015 510 96.5 Plus
Ymm 880023 Ymm 525902..526015 1902..2015 510 96.5 Plus
Ymm 880023 Ymm 496789..496902 2015..1902 510 96.5 Minus
2CEN 225573 2CEN 110662..110775 1902..2015 510 96.5 Plus
2CEN 225573 2CEN 118021..118134 1902..2015 510 96.5 Plus
X 23542271 X 14552103..14552215 2128..2016 505 96.5 Minus
X 23542271 X 1930996..1931108 2128..2016 505 96.5 Minus
X 23542271 X 3185612..3185724 2016..2128 505 96.5 Plus
3R 32079331 3R 452225..452337 2128..2016 505 96.5 Minus
3R 32079331 3R 3040843..3040955 2128..2016 505 96.5 Minus
3R 32079331 3R 18039931..18040043 2016..2128 505 96.5 Plus
3R 32079331 3R 20515187..20515299 2016..2128 505 96.5 Plus
3R 32079331 3R 23851517..23851629 2128..2016 505 96.5 Minus
2R 25286936 2R 3228061..3228173 2128..2016 505 96.5 Minus
2R 25286936 2R 3385927..3386039 2128..2016 505 96.5 Minus
2R 25286936 2R 5387147..5387259 2016..2128 505 96.5 Plus
2R 25286936 2R 6959226..6959338 2016..2128 505 96.5 Plus
2R 25286936 2R 13735272..13735384 2016..2128 505 96.5 Plus
3L 28110227 3L 15426085..15426197 2016..2128 505 96.5 Plus
3L 28110227 3L 17918831..17918943 2128..2016 505 96.5 Minus
3L 28110227 3L 22810857..22810969 2016..2128 505 96.5 Plus
3L 28110227 3L 23385579..23385691 2128..2016 505 96.5 Minus
3L 28110227 3L 24279240..24279352 2016..2128 505 96.5 Plus
3L 28110227 3L 24659298..24659410 2128..2016 505 96.5 Minus
3L 28110227 3L 26388159..26388271 2128..2016 505 96.5 Minus
2L 23513712 2L 2112573..2112685 2128..2016 505 96.5 Minus
2L 23513712 2L 4662285..4662397 2128..2016 505 96.5 Minus
2L 23513712 2L 10593302..10593414 2128..2016 505 96.5 Minus
2L 23513712 2L 14991458..14991570 2016..2128 505 96.5 Plus
2L 23513712 2L 17144790..17144902 2128..2016 505 96.5 Minus
2L 23513712 2L 19658085..19658197 2128..2016 505 96.5 Minus
Y 3667352 Y 754231..754343 2016..2128 505 96.5 Plus
Y 3667352 Y 790392..790504 2016..2128 505 96.5 Plus
Y 3667352 Y 2435425..2435537 2128..2016 505 96.5 Minus
Y 3667352 Y 2978055..2978167 2128..2016 505 96.5 Minus
U 3151297 U 1132422..1132534 2016..2128 505 96.5 Plus
Xmm 1049845 Xmm 163553..163665 2016..2128 505 96.5 Plus
2CEN 225573 2CEN 117909..118021 2016..2128 505 96.5 Plus
2R 25286936 2R 20071761..20071872 2126..2015 500 96.4 Minus
3R 32079331 3R 20513171..20513278 1902..2009 495 97.2 Plus
3R 32079331 3R 20515299..20515406 1902..2009 495 97.2 Plus
2R 25286936 2R 20069669..20069779 2126..2016 495 96.4 Minus
3L 28110227 3L 15426197..15426310 1902..2015 495 95.6 Plus
Y 3667352 Y 3153815..3153922 1902..2009 495 97.2 Plus
Ymm 880023 Ymm 525806..525902 2032..2128 440 96.9 Plus
U 3151297 U 1132111..1132200 2310..2221 435 98.9 Minus
U 3151297 U 1074332..1074414 2046..2128 385 97.6 Plus
2R 25286936 2R 20069590..20069669 2015..1936 370 97.5 Minus
2R 25286936 2R 20071682..20071761 2015..1936 370 97.5 Minus
Y 3667352 Y 650491..650568 1979..1902 360 97.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1945796..1948105 2310..1 11550 100 Minus
X 23527363 X 14566991..14567399 2310..1902 2045 100 Minus
X 23527363 X 14559906..14560313 2310..1903 2040 100 Minus
X 23527363 X 1938799..1939206 2310..1903 2040 100 Minus
2R 25260384 2R 13729387..13729795 1902..2310 2030 99.7 Plus
X 23527363 X 3186620..3187028 1902..2310 2030 99.7 Plus
3R 31820162 3R 23599146..23599554 2310..1902 2030 99.7 Minus
2R 25260384 2R 13736471..13736878 1903..2310 2025 99.7 Plus
X 23527363 X 3193710..3194117 1903..2310 2025 99.7 Plus
3R 31820162 3R 23592053..23592460 2310..1903 2025 99.7 Minus
3L 28103327 3L 17913865..17914273 2310..1902 2015 99.5 Minus
2L 23513712 2L 10600093..10600509 2310..1895 2015 99.2 Minus
3L 28103327 3L 17911636..17912043 2310..1903 2010 99.5 Minus
2R 25260384 2R 6953419..6953828 1902..2310 2010 99.7 Plus
2L 23513712 2L 14984452..14984861 1902..2310 2010 99.7 Plus
2L 23513712 2L 4668994..4669403 2310..1902 2010 99.7 Minus
Y 3410481 Y 1058441..1058850 1902..2310 2010 99.7 Plus
2R 25260384 2R 6960425..6960833 1903..2310 2005 99.7 Plus
2L 23513712 2L 14991458..14991866 1903..2310 2005 99.7 Plus
2L 23513712 2L 4661989..4662397 2310..1903 2005 99.7 Minus
Y 3410481 Y 1065539..1065947 1903..2310 2005 99.7 Plus
3R 31820162 3R 17773658..17774072 1897..2310 2005 99.2 Plus
2L 23513712 2L 2119364..2119777 2310..1898 2000 99.2 Minus
Y 3410481 Y 3000165..3000581 1895..2310 2000 99 Plus
3L 28103327 3L 24659187..24659596 2310..1902 1995 99.5 Minus
2R 25260384 2R 11416771..11417180 1902..2310 1995 99.5 Plus
2R 25260384 2R 3234856..3235265 2310..1902 1995 99.5 Minus
2L 23513712 2L 19664880..19665289 2310..1902 1995 99.5 Minus
2L 23513712 2L 17151587..17151996 2310..1902 1995 99.5 Minus
Y 3410481 Y 1022263..1022672 1902..2310 1995 99.5 Plus
Y 3410481 Y 2546983..2547392 2310..1902 1995 99.5 Minus
3R 31820162 3R 20253889..20254298 1902..2310 1995 99.5 Plus
3L 28103327 3L 15419185..15419593 1903..2310 1990 99.5 Plus
3L 28103327 3L 24652102..24652510 2310..1903 1990 99.5 Minus
2R 25260384 2R 3227765..3228173 2310..1903 1990 99.5 Minus
2L 23513712 2L 19657789..19658197 2310..1903 1990 99.5 Minus
2L 23513712 2L 17144494..17144902 2310..1903 1990 99.5 Minus
2L 23513712 2L 10593006..10593414 2310..1903 1990 99.5 Minus
2L 23513712 2L 2112277..2112685 2310..1903 1990 99.5 Minus
Y 3410481 Y 1029378..1029786 1903..2310 1990 99.5 Plus
Y 3410481 Y 2534238..2534646 2310..1903 1990 99.5 Minus
3R 31820162 3R 20256018..20256426 1903..2310 1990 99.5 Plus
3R 31820162 3R 17780762..17781170 1903..2310 1990 99.5 Plus
3L 28103327 3L 23365299..23365715 1895..2310 1985 98.8 Plus
2R 25260384 2R 5381248..5381664 1895..2310 1985 98.8 Plus
2R 25260384 2R 3392725..3393135 2310..1901 1985 99.2 Minus
Unmapped_scaffold_42 47411 Unmapped_scaffold_42 1779..2188 1902..2310 1980 99.2 Plus
2R 25260384 2R 5388346..5388754 1903..2310 1975 99.2 Plus
2R 25260384 2R 3385631..3386039 2310..1903 1975 99.2 Minus
Unmapped_scaffold_42 47411 Unmapped_scaffold_42 8873..9281 1903..2310 1975 99.2 Plus
3L 28103327 3L 26388060..26388476 2310..1895 1970 98.5 Minus
3L 28103327 3L 24265247..24265656 1902..2310 1965 99 Plus
3L 28103327 3L 22796867..22797276 1902..2310 1965 99 Plus
3L 28103327 3L 25421552..25421961 2310..1902 1965 99 Minus
3L 28103327 3L 23385483..23385892 2310..1902 1965 99 Minus
Y 3410481 Y 771672..772081 1902..2310 1965 99 Plus
3R 31820162 3R 256605..257014 2310..1902 1965 99 Minus
3L 28103327 3L 24272340..24272748 1903..2310 1960 99 Plus
3L 28103327 3L 22803957..22804365 1903..2310 1960 99 Plus
3L 28103327 3L 26380963..26381371 2310..1903 1960 99 Minus
3L 28103327 3L 23378383..23378791 2310..1903 1960 99 Minus
Y 3410481 Y 778772..779180 1903..2310 1960 99 Plus
3R 31820162 3R 249507..249915 2310..1903 1960 99 Minus
3L 28103327 3L 15416914..15417211 2014..2310 1420 98.9 Plus
2R 25260384 2R 21152369..21152666 2014..2310 1405 98.6 Plus
Unmapped_scaffold_42 47411 Unmapped_scaffold_42 14961..15258 2014..2310 1405 98.6 Plus
3L 28103327 3L 23372409..23372704 2016..2310 1395 98.6 Plus
2R 25260384 2R 21154542..21154837 2016..2310 1395 98.6 Plus
2R 25260384 2R 11419459..11419754 2016..2310 1395 98.6 Plus
Y 3410481 Y 3007174..3007469 2016..2310 1395 98.6 Plus
2R 25260384 2R 20072699..20072960 2310..2049 1310 100 Minus
2R 25260384 2R 20070607..20070868 2310..2049 1310 100 Minus
Y 3410481 Y 1557260..1557484 2087..2310 1070 99.1 Plus
Y 3410481 Y 628305..628495 2092..1902 955 100 Minus
2R 25260384 2R 20072960..20073072 2013..1901 565 100 Minus
2R 25260384 2R 20070868..20070978 2013..1903 555 100 Minus
3L 28103327 3L 24272452..24272565 1902..2015 540 98.2 Plus
3L 28103327 3L 22804069..22804182 1902..2015 540 98.2 Plus
3L 28103327 3L 15416915..15417028 1902..2015 540 98.2 Plus
3L 28103327 3L 26381146..26381259 2015..1902 540 98.2 Minus
3L 28103327 3L 23378566..23378679 2015..1902 540 98.2 Minus
2R 25260384 2R 21152370..21152483 1902..2015 540 98.2 Plus
Y 3410481 Y 778884..778997 1902..2015 540 98.2 Plus
3R 31820162 3R 249690..249803 2015..1902 540 98.2 Minus
3L 28103327 3L 23372409..23372521 1903..2015 535 98.2 Plus
2R 25260384 2R 21154542..21154654 1903..2015 535 98.2 Plus
2R 25260384 2R 11419459..11419571 1903..2015 535 98.2 Plus
2R 25260384 2R 3235152..3235272 2128..2008 530 95.8 Minus
2L 23513712 2L 19665176..19665292 2128..2012 525 96.5 Minus
2L 23513712 2L 17151883..17151999 2128..2012 525 96.5 Minus
2L 23513712 2L 4669290..4669406 2128..2012 525 96.5 Minus
3R 31820162 3R 23599441..23599557 2128..2012 525 96.5 Minus
Unmapped_scaffold_42 47411 Unmapped_scaffold_42 14962..15075 1902..2015 525 97.3 Plus
Y 3410481 Y 3007174..3007280 1903..2009 520 99 Plus
3L 28103327 3L 25421848..25421962 2128..2014 515 96.5 Minus
3L 28103327 3L 24659483..24659597 2128..2014 515 96.5 Minus
3L 28103327 3L 23385779..23385893 2128..2014 515 96.5 Minus
3L 28103327 3L 17914160..17914274 2128..2014 515 96.5 Minus
3L 28103327 3L 24265246..24265360 2014..2128 515 96.5 Plus
2R 25260384 2R 13729386..13729500 2014..2128 515 96.5 Plus
2R 25260384 2R 11416770..11416884 2014..2128 515 96.5 Plus
2R 25260384 2R 6953418..6953532 2014..2128 515 96.5 Plus
2L 23513712 2L 14984451..14984565 2014..2128 515 96.5 Plus
Y 3410481 Y 1058440..1058554 2014..2128 515 96.5 Plus
Y 3410481 Y 1022262..1022376 2014..2128 515 96.5 Plus
Y 3410481 Y 771671..771785 2014..2128 515 96.5 Plus
Y 3410481 Y 2547279..2547393 2128..2014 515 96.5 Minus
X 23527363 X 3186619..3186733 2014..2128 515 96.5 Plus
X 23527363 X 14567286..14567400 2128..2014 515 96.5 Minus
3R 31820162 3R 256901..257015 2128..2014 515 96.5 Minus
3L 28103327 3L 17911818..17911931 2015..1902 510 96.4 Minus
3L 28103327 3L 24652285..24652398 2015..1902 510 96.4 Minus
2R 25260384 2R 5388458..5388571 1902..2015 510 96.4 Plus
2R 25260384 2R 3385814..3385927 2015..1902 510 96.4 Minus
2R 25260384 2R 3227948..3228061 2015..1902 510 96.4 Minus
2R 25260384 2R 13736583..13736696 1902..2015 510 96.4 Plus
2R 25260384 2R 6960537..6960650 1902..2015 510 96.4 Plus
2L 23513712 2L 14991570..14991683 1902..2015 510 96.4 Plus
2L 23513712 2L 19657972..19658085 2015..1902 510 96.4 Minus
2L 23513712 2L 17144677..17144790 2015..1902 510 96.4 Minus
2L 23513712 2L 10593189..10593302 2015..1902 510 96.4 Minus
2L 23513712 2L 4662172..4662285 2015..1902 510 96.4 Minus
2L 23513712 2L 2112460..2112573 2015..1902 510 96.4 Minus
Y 3410481 Y 1065651..1065764 1902..2015 510 96.4 Plus
Y 3410481 Y 1029490..1029603 1902..2015 510 96.4 Plus
Y 3410481 Y 2534421..2534534 2015..1902 510 96.4 Minus
Y 3410481 Y 628382..628495 2128..2015 510 96.4 Minus
X 23527363 X 1938981..1939094 2015..1902 510 96.4 Minus
X 23527363 X 3193822..3193935 1902..2015 510 96.4 Plus
X 23527363 X 14560088..14560201 2015..1902 510 96.4 Minus
3R 31820162 3R 17780874..17780987 1902..2015 510 96.4 Plus
3R 31820162 3R 23592235..23592348 2015..1902 510 96.4 Minus
Unmapped_scaffold_42 47411 Unmapped_scaffold_42 8985..9098 1902..2015 510 96.4 Plus
2R 25260384 2R 20072960..20073071 2126..2015 500 96.4 Minus
3L 28103327 3L 15419297..15419410 1902..2015 495 95.6 Plus
2R 25260384 2R 20070868..20070978 2126..2016 495 96.3 Minus
3R 31820162 3R 20256130..20256237 1902..2009 495 97.2 Plus
2R 25260384 2R 20072881..20072960 2015..1936 370 97.5 Minus
2R 25260384 2R 20070789..20070868 2015..1936 370 97.5 Minus
Blast to na_te.dros performed 2019-03-15 15:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
opus 7521 opus OPUS 7521bp 1..407 1903..2308 2014 99.8 Plus
opus 7521 opus OPUS 7521bp 7004..7410 1903..2308 2014 99.8 Plus
opus 7521 opus OPUS 7521bp 7116..7232 1902..2018 540 95.7 Plus
opus 7521 opus OPUS 7521bp 113..229 1902..2018 540 95.7 Plus
opus 7521 opus OPUS 7521bp 1..116 2016..2131 535 95.7 Plus
opus 7521 opus OPUS 7521bp 7004..7119 2016..2131 535 95.7 Plus

GH24078.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:30:38 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1831546..1833853 1..2308 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:54:46 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..1464 54..1517 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:21:59 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..1464 54..1517 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:30:13 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..1464 54..1517 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:54:36 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..1464 54..1517 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:07:55 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..1464 54..1517 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:19:05 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..2308 1..2308 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:21:58 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..2308 1..2308 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:30:13 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 34..2341 1..2308 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:54:36 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 1..2308 1..2308 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:07:55 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
CG3857-RA 34..2341 1..2308 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:38 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
X 1937700..1940007 1..2308 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:38 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
X 1937700..1940007 1..2308 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:38 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
X 1937700..1940007 1..2308 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:30:13 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1831733..1834040 1..2308 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:32:18 Download gff for GH24078.complete
Subject Subject Range Query Range Percent Splice Strand
X 1945798..1948105 1..2308 100   Minus

GH24078.hyp Sequence

Translation from 2 to 1516

> GH24078.hyp
QTDLNLVKYKPQITGFRMADPRRRFRNKKRDEACSGLLAPVTIARREDAA
RMMQPKILLKKDRDREQETWDRERDKDRKLERDREAEPSPSCYPDTPPAL
KTMIVNRTGEVRPADRCQMPLAGGALVQGSGQLSAVPSSSVCAALVSSVP
TSRDKGSCSGGAGTAGTSAGAPNALQELQPPRMNRPTPLIVANGIFNANA
RKLFHKTNTDFTVIGVLGGQSSGKSTLLNLLAAERSLDYDYYQHLFSPEA
DECIFATRHKLKPNNGQKSILRPRTETLQFFITRERHILLDTPPLMPVGK
DSDHQDLYSLGTMAQLLSVCHILILVIDGLALEQLRLINAALRLRPTLHC
KGYVRDHMPQVVFVRARAHRIDFEIQQRERLDKKLAYLYGPTGLPIYRGR
GDARCLNTFLLPEVSSNKATAFHSCLGELVRQFRERILGCTRISMCHTST
ELSEAIWFEILAESARKAAPHFEKIYAEIKLRHLDTRCQWRSDNWRTFSS
NAES*

GH24078.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3857-PA 487 CG3857-PA 1..487 18..504 2541 100 Plus

GH24078.pep Sequence

Translation from 53 to 1516

> GH24078.pep
MADPRRRFRNKKRDEACSGLLAPVTIARREDAARMMQPKILLKKDRDREQ
ETWDRERDKDRKLERDREAEPSPSCYPDTPPALKTMIVNRTGEVRPADRC
QMPLAGGALVQGSGQLSAVPSSSVCAALVSSVPTSRDKGSCSGGAGTAGT
SAGAPNALQELQPPRMNRPTPLIVANGIFNANARKLFHKTNTDFTVIGVL
GGQSSGKSTLLNLLAAERSLDYDYYQHLFSPEADECIFATRHKLKPNNGQ
KSILRPRTETLQFFITRERHILLDTPPLMPVGKDSDHQDLYSLGTMAQLL
SVCHILILVIDGLALEQLRLINAALRLRPTLHCKGYVRDHMPQVVFVRAR
AHRIDFEIQQRERLDKKLAYLYGPTGLPIYRGRGDARCLNTFLLPEVSSN
KATAFHSCLGELVRQFRERILGCTRISMCHTSTELSEAIWFEILAESARK
AAPHFEKIYAEIKLRHLDTRCQWRSDNWRTFSSNAES*

GH24078.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21990-PA 488 GF21990-PA 1..485 1..479 1426 63.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:29:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12665-PA 487 GG12665-PA 1..487 1..487 2364 89.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3857-PA 487 CG3857-PA 1..487 1..487 2541 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:29:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21564-PA 443 GI21564-PA 24..443 22..483 1017 49.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15134-PA 132 GL15134-PA 1..103 1..122 151 39.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22774-PA 470 GA22774-PA 1..469 1..485 1476 61.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18934-PA 487 GM18934-PA 1..487 1..487 2439 93.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16400-PA 485 GD16400-PA 1..485 1..487 2016 81.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:30:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15709-PA 476 GJ15709-PA 25..476 23..482 1088 52.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:30:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25751-PA 477 GK25751-PA 6..472 5..481 1165 53 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16993-PA 490 GE16993-PA 1..490 1..487 2338 89 Plus