BDGP Sequence Production Resources |
Search the DGRC for GH24095
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 240 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17230-RA |
Protein status: | GH24095.pep: gold |
Preliminary Size: | 1717 |
Sequenced Size: | 1699 |
Gene | Date | Evidence |
---|---|---|
CG17230 | 2001-01-01 | Release 2 assignment |
CG17230 | 2001-07-04 | Blastp of sequenced clone |
CG17230 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17230 | 2008-04-29 | Release 5.5 accounting |
CG17230 | 2008-08-15 | Release 5.9 accounting |
CG17230 | 2008-12-18 | 5.12 accounting |
1699 bp (1699 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051601
> GH24095.complete AAACTTCCAGCGTTCAGATCCCAGTATCTGCGGCGTGGTGGCAATACATA TATCTGCTTTACAAAGGAGGAAGGAGCAGGACCAAGGGCCAAGGACCAAG GATGTCGGGGCGCCTTAACCACCAGCACGCGGCGTATGCGCATCGCATGG AACAGGAACACAACCGGGTGCAGGCCACACAGGCAGTGAACAGCTACTAC AGCCATTGGGGTAAGGTCACATCACGCTTCGAAAACTGGACCAACAAAGA GTACTATGAGAAGGCGGATCAACAGCTGCAATCCCGTCGCGATCAGCAGG AGAAGGAGGCAGCTCTTAATGAACGTCGGTCCAGACTTCGCCAGCTTCTG GCCTCGGAGAGCGAAGAGTACAACAACGAGATGGAGCGACGTCGCCGGCC TCGGGAACCCGGTGGTGGAGACCTCCAGATGCTTGATCGGGTTAACCAGT CGCTTAAGGAGCAAGAGCAACTGCGTCGCAAGCTCGAGATGGAAGCCAAG TTGTACGGCCGCTGGCGTCATGGCGTCGACGATGAAAAGCTGCTCTACCA GTCCAAGTCGGACAACGAAGTGCTGGCCAAGCTCAACTGGCTGGACCGCC AGATCGAGAGTCAGCAGCAGCGCGAGGAGCAGCAGGCCCTGGCCGCGGAG AGGCAGCTCCTGCTGCAGCAGGAAATCAGTCGCACGGAACAAGCTCAAAA GGAGCGCCAGCAGATCCGGGAGCAACAATTGCGCGAACTGCGTGCTCTGC AAGAATCCCACATGTCCGAGCTTCGTCTGCGACAGCAGGAGGCGGACAAG TTGAAGGAGGAGGAGCAGCACTTCCAGCTCTTCCTGGGCGAACTGGACAA AGAGCGGGAATTGCTGGAGGAGAGCAGTGCTCTGGTGCTCAAACAAGTCG ATTCCGGACACGCCTTCAACCTCAAGAAGATTAAGGTCTTCATCCGGCAG CGTAGTGAGGCCAGTCGGAAGCAGATCTCCCTGTGCATCAACATGCTGCA TCGCATGGCCAAGTATGTGGTCAAGACGGAGGAGCTAAAGACCCTGCTGG ACAAGTACCGCTCCCAGTTGGAGAACGAGGAACTGGCCTGCGCCCAGATC GAAAGCATGTACGAGTCAGAGGCCAAGTACAACCTACAGCGCAGTGAGGA AAACTGGCGGGAACAGCACTTGCAGCGCTACGGAGAGCTAAGCAAGTTCA TTGACCAGGAGAAGGATTGCCTGGGCGCCATGCTTCAGGAGAATGTGAGC CAGCAGCAGACATTGGTGGAGCTGAGGAGCCAACACCTGACTGGCATCGA GCAGGCCAACAAGCAGCTGGAGCAACTTAGCCAGGTGCAGGCGGACGAGG TGCCGGCACCATCGCAAAGTAATCTCAAGGAGGTCGAATCACAATCTTCA GTTTCCGAGACTTCCGTGGAGGAGAATCTGCTGCCCAAGGTGAGCGATTC GTTCTCCAATCTGAACCTGGATGTGTGGAAGGATCTGCCCCCAGCTCGCA GTGAAGTCGACATGCAGCGCCTAAACCAATCCCGATCCCTCAGTGTGGTC ACCTCGCAGACAGCCGCTCCGCCGAAGTTCGCACGCAAGCGTGTGGCCTG GACCTAACATTTCAATTCCATATTATCGTCTTTGTTCCAGTTAAAATTTC AATGGTATTAATAGACATATTGCTAGTTAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7289176..7289241 | 1..66 | 100 | -> | Plus |
chr3R | 7289509..7291120 | 67..1678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 1..1506 | 102..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 1..1506 | 102..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RA | 1..1506 | 102..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 1..1506 | 102..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RA | 1..1506 | 102..1607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 59..1736 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 59..1736 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 59..1736 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 59..1736 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17230-RB | 59..1736 | 1..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11463694..11463759 | 1..66 | 100 | -> | Plus |
3R | 11464027..11465638 | 67..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11463694..11463759 | 1..66 | 100 | -> | Plus |
3R | 11464027..11465638 | 67..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11463694..11463759 | 1..66 | 100 | -> | Plus |
3R | 11464027..11465638 | 67..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7289416..7289481 | 1..66 | 100 | -> | Plus |
arm_3R | 7289749..7291360 | 67..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11204858..11206469 | 67..1678 | 100 | Plus | |
3R | 11204525..11204590 | 1..66 | 100 | -> | Plus |
Translation from 2 to 1606
> GH24095.hyp TSSVQIPVSAAWWQYIYLLYKGGRSRTKGQGPRMSGRLNHQHAAYAHRME QEHNRVQATQAVNSYYSHWGKVTSRFENWTNKEYYEKADQQLQSRRDQQE KEAALNERRSRLRQLLASESEEYNNEMERRRRPREPGGGDLQMLDRVNQS LKEQEQLRRKLEMEAKLYGRWRHGVDDEKLLYQSKSDNEVLAKLNWLDRQ IESQQQREEQQALAAERQLLLQQEISRTEQAQKERQQIREQQLRELRALQ ESHMSELRLRQQEADKLKEEEQHFQLFLGELDKERELLEESSALVLKQVD SGHAFNLKKIKVFIRQRSEASRKQISLCINMLHRMAKYVVKTEELKTLLD KYRSQLENEELACAQIESMYESEAKYNLQRSEENWREQHLQRYGELSKFI DQEKDCLGAMLQENVSQQQTLVELRSQHLTGIEQANKQLEQLSQVQADEV PAPSQSNLKEVESQSSVSETSVEENLLPKVSDSFSNLNLDVWKDLPPARS EVDMQRLNQSRSLSVVTSQTAAPPKFARKRVAWT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17230-PC | 501 | CG17230-PC | 1..501 | 34..534 | 2530 | 100 | Plus |
CG17230-PB | 501 | CG17230-PB | 1..501 | 34..534 | 2530 | 100 | Plus |
CG17230-PA | 501 | CG17230-PA | 1..501 | 34..534 | 2530 | 100 | Plus |
rgn-PD | 800 | CG6014-PD | 322..702 | 98..469 | 188 | 23.6 | Plus |
rgn-PA | 800 | CG6014-PA | 322..702 | 98..469 | 188 | 23.6 | Plus |
rgn-PD | 800 | CG6014-PD | 411..753 | 73..432 | 157 | 23.1 | Plus |
Translation from 101 to 1606
> GH24095.pep MSGRLNHQHAAYAHRMEQEHNRVQATQAVNSYYSHWGKVTSRFENWTNKE YYEKADQQLQSRRDQQEKEAALNERRSRLRQLLASESEEYNNEMERRRRP REPGGGDLQMLDRVNQSLKEQEQLRRKLEMEAKLYGRWRHGVDDEKLLYQ SKSDNEVLAKLNWLDRQIESQQQREEQQALAAERQLLLQQEISRTEQAQK ERQQIREQQLRELRALQESHMSELRLRQQEADKLKEEEQHFQLFLGELDK ERELLEESSALVLKQVDSGHAFNLKKIKVFIRQRSEASRKQISLCINMLH RMAKYVVKTEELKTLLDKYRSQLENEELACAQIESMYESEAKYNLQRSEE NWREQHLQRYGELSKFIDQEKDCLGAMLQENVSQQQTLVELRSQHLTGIE QANKQLEQLSQVQADEVPAPSQSNLKEVESQSSVSETSVEENLLPKVSDS FSNLNLDVWKDLPPARSEVDMQRLNQSRSLSVVTSQTAAPPKFARKRVAW T*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18372-PA | 501 | GF18372-PA | 1..501 | 1..501 | 1850 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18178-PA | 501 | GG18178-PA | 1..501 | 1..501 | 2301 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17325-PA | 510 | GH17325-PA | 1..510 | 1..501 | 1681 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17230-PC | 501 | CG17230-PC | 1..501 | 1..501 | 2530 | 100 | Plus |
CG17230-PB | 501 | CG17230-PB | 1..501 | 1..501 | 2530 | 100 | Plus |
CG17230-PA | 501 | CG17230-PA | 1..501 | 1..501 | 2530 | 100 | Plus |
rgn-PD | 800 | CG6014-PD | 322..702 | 65..436 | 188 | 23.6 | Plus |
rgn-PA | 800 | CG6014-PA | 322..702 | 65..436 | 188 | 23.6 | Plus |
rgn-PC | 808 | CG6014-PC | 330..710 | 65..436 | 188 | 23.6 | Plus |
rgn-PB | 808 | CG6014-PB | 330..710 | 65..436 | 188 | 23.6 | Plus |
Slik-PA | 1300 | CG4527-PA | 945..1297 | 152..472 | 174 | 23.4 | Plus |
Slik-PF | 1635 | CG4527-PF | 945..1298 | 152..472 | 173 | 23.4 | Plus |
Slik-PB | 1703 | CG4527-PB | 945..1298 | 152..472 | 173 | 23.4 | Plus |
Slik-PD | 1703 | CG4527-PD | 945..1298 | 152..472 | 173 | 23.4 | Plus |
Slik-PE | 1342 | CG4527-PE | 945..1309 | 152..480 | 167 | 22.9 | Plus |
CLIP-190-PN | 1598 | CG5020-PN | 472..938 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PR | 1601 | CG5020-PR | 475..941 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PP | 1623 | CG5020-PP | 497..963 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PC | 1652 | CG5020-PC | 526..992 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PS | 1653 | CG5020-PS | 527..993 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PM | 1668 | CG5020-PM | 542..1008 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PB | 1689 | CG5020-PB | 563..1029 | 49..476 | 163 | 25.8 | Plus |
CLIP-190-PA | 1690 | CG5020-PA | 564..1030 | 49..476 | 163 | 25.8 | Plus |
rgn-PD | 800 | CG6014-PD | 411..753 | 40..399 | 157 | 23.1 | Plus |
rgn-PA | 800 | CG6014-PA | 411..753 | 40..399 | 157 | 23.1 | Plus |
rgn-PC | 808 | CG6014-PC | 419..761 | 40..399 | 157 | 23.1 | Plus |
rgn-PB | 808 | CG6014-PB | 419..761 | 40..399 | 157 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10288-PA | 507 | GI10288-PA | 1..507 | 1..501 | 1694 | 64 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12376-PA | 501 | GL12376-PA | 1..500 | 1..500 | 1763 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14404-PA | 501 | GA14404-PA | 1..500 | 1..500 | 1763 | 68.5 | Plus |
Dpse\GA23215-PA | 501 | GA23215-PA | 1..500 | 1..500 | 1759 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23947-PA | 501 | GM23947-PA | 1..501 | 1..501 | 2546 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11096-PA | 496 | GJ11096-PA | 3..496 | 2..501 | 1701 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11298-PA | 504 | GK11298-PA | 1..504 | 1..501 | 1710 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26099-PA | 501 | GE26099-PA | 1..501 | 1..501 | 2242 | 93.4 | Plus |