BDGP Sequence Production Resources |
Search the DGRC for GH24245
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 242 |
Well: | 45 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4610-RA |
Protein status: | GH24245.pep: gold |
Preliminary Size: | 2012 |
Sequenced Size: | 2100 |
Gene | Date | Evidence |
---|---|---|
CG4610 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4610 | 2002-05-18 | Blastp of sequenced clone |
CG4610 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4610 | 2008-04-29 | Release 5.5 accounting |
CG4610 | 2008-08-15 | Release 5.9 accounting |
CG4610 | 2008-12-18 | 5.12 accounting |
2100 bp (2100 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118816
> GH24245.complete TGTTGTTATTGTGGGGTGTTTTGAAAATGCAGCAGCTACGAAATGCCGTG GTGCACGGTTGGGCTAGAAGGATAAGGGCCCCATCGAGAAGTGCCCACAG TGCCGGTGCCGATATCTACGACGTGGTGGTCATCGGAGGCGGACATGCCG GAACAGAGGCCTCGGCGGCAGCTGCTCGCATGGGATCACGCACCCTGCTG CTAACCCACAAACTGGAGACTATTGGCGAGATGTCCTGCAACCCGTCGTT CGGTGGCATTGGCAAGGGTCACCTGATGCGCGAGGTGGATGCCCTGGATG GCGTATGTGCCCGCTGCTGCGATGTTTCCGGAGTACACTACAAGGTGCTC AATAGACGGCGCGGTCCAGCTGTTTGGGGGCCCAGGGCGCAGATCGATCG CCAGCTGTACAAAAAGGCTGTGCAGCAGGAACTGCACAGCACCCCCAATC TGGAGATTCGAGCAGCCGCTGTGGACAACCTGCTGATAGAGGATGAACAG GATACCCAAGCCCGCCGTTGTACCGGCGTCCTTTTGGCCAACGGAGAAGT GGTACGTAGTCGATCCGTGGTACTCACCACGGGAACATTCCTGCGGGCAC ACATAAACATCGGACTCGAGGTGCGACCGGCCGGCCGAATTGGAGACGCT CCAGCCAAAGCGCTGGGCGAGGCGATCGACAGATTAGGTTTTCGCATGGG GAGGCTGAAAACTGGAACTCCGCCTAGAATAGCAAAGGACAGTGTGGATT TCTCACAGCTCCAAAGGCACGAAGGTGATGATCCGCCTATGCCTTTCTCC TTTCTCAACAAAGACGTTTGGCTACCCGCCAAGGACCAACTACCCTGCTA CCTTACCTACACCACACCAAAAGTCAGCGACATTGTGCGCGACAATCTTC ATGTAAATCGCCATGTCACCGAGGAGATTACCGGCCCACGCTACTGCCCC TCGATTGAGTCCAAGATCCTGAGGTTCGGCGCGAAGGTACATCAGGTGTG GTTAGAGCCAGAAGGTCTGGACAGTTCCTTAGTGTATCCCCAAGGAATCT CCTGCACGCTGCCCCACGATCAGCAAGTAGAGCTGGTCCATGCCATCCAA GGTCTGGAAAAGGCGGTAGTTGTCCAGCCCGGTTATGGCGTGGAGTACGA CTTCATAGACCCCCGTGAGTTGTATCCCACACTGGAGACGAAACGAGTGC CAGGACTCTTCTTTGCTGGCCAGATAAATGGAACTACGGGCTATGAAGAA GCAGCCGCTCAGGGCATCATAGCTGGTGCCAATGCAGCTGGAAAAACCAG GCATAGCGATGGAAGGCAACTAACCATAAGTCGAACTGAGGGCTACATAG GCGTGTTGATCGATGACCTGACTTCGTTAGGCACAAATGAACCCTACCGC ATGTTTACAAGTCGGGCAGAGTTTCGGTTGTCACTTCGTCCGGACAATGC CGACATGCGTCTCACACAAAAGGGCTACGAATTTGGACTTGTATCTTCAG ATCGCTACCAGCACTTCCAGCAAACCGAGGCGAGATTGCAATCGGCCATT GAGTCCTTGCGGCGATTGCGGAAGCACACTCATTACTGGCGACAAGCACT CAATCTGCCCAAGGCCAAAGCTTCGGTGGAGAAATCGGCTTTCGACATGC TGGGAATTCCAGCAGATAACATCACTATCGAGCAGCTAATCCATCTTCAT CCCAACGAACTGAGCTGGCTTAAAGGCGAGCGAAATCTGGCCGAAAGGCT GAAAATAGAGGCACTGTATTCGTTCTTTGTCGATGAACAGCAACGAGATG TGGAGGATGTACGGCGTGAGGAGCGCCTGTCCATTCCCGCCGACATTGAT TACTTCTCAAAGTCCCTAAGCTTGTCCAACGAGGAGCGACAGAAGCTGAC GCTCATCCAGCCACAGACAATTGCGGCGGCTAGTAGAATTCAAGGAGTGA CTCCATCGACAATTGTAAGGATTCTTAAATACGTTAAAAAAGCGGAGCTA GCAAAAGCCTAGGTTACGATTATGTAAAAATATATGTAATATTTGATCGC AGAGTCCCAAACCAAAAAAGAACTTGCAAAGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4610-RA | 2082 | CG4610-RA | 1..2082 | 1..2082 | 10410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18378758..18380839 | 1..2082 | 10200 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22492214..22494296 | 1..2083 | 10415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22493413..22495495 | 1..2083 | 10415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18378758..18380839 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..1986 | 27..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..1986 | 27..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..1986 | 27..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..1986 | 27..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..1986 | 27..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..2082 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..2082 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 18..2099 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 1..2082 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4610-RA | 18..2099 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22492214..22494295 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22492214..22494295 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22492214..22494295 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18379719..18381800 | 1..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22493413..22495494 | 1..2082 | 100 | Plus |
Translation from 2 to 2011
> GH24245.hyp LLLWGVLKMQQLRNAVVHGWARRIRAPSRSAHSAGADIYDVVVIGGGHAG TEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDALDG VCARCCDVSGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNL EIRAAAVDNLLIEDEQDTQARRCTGVLLANGEVVRSRSVVLTTGTFLRAH INIGLEVRPAGRIGDAPAKALGEAIDRLGFRMGRLKTGTPPRIAKDSVDF SQLQRHEGDDPPMPFSFLNKDVWLPAKDQLPCYLTYTTPKVSDIVRDNLH VNRHVTEEITGPRYCPSIESKILRFGAKVHQVWLEPEGLDSSLVYPQGIS CTLPHDQQVELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLETKRVP GLFFAGQINGTTGYEEAAAQGIIAGANAAGKTRHSDGRQLTISRTEGYIG VLIDDLTSLGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYEFGLVSSD RYQHFQQTEARLQSAIESLRRLRKHTHYWRQALNLPKAKASVEKSAFDML GIPADNITIEQLIHLHPNELSWLKGERNLAERLKIEALYSFFVDEQQRDV EDVRREERLSIPADIDYFSKSLSLSNEERQKLTLIQPQTIAAASRIQGVT PSTIVRILKYVKKAELAKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4610-PA | 661 | CG4610-PA | 1..661 | 9..669 | 3411 | 100 | Plus |
Translation from 26 to 2011
> GH24245.pep MQQLRNAVVHGWARRIRAPSRSAHSAGADIYDVVVIGGGHAGTEASAAAA RMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLMREVDALDGVCARCCDV SGVHYKVLNRRRGPAVWGPRAQIDRQLYKKAVQQELHSTPNLEIRAAAVD NLLIEDEQDTQARRCTGVLLANGEVVRSRSVVLTTGTFLRAHINIGLEVR PAGRIGDAPAKALGEAIDRLGFRMGRLKTGTPPRIAKDSVDFSQLQRHEG DDPPMPFSFLNKDVWLPAKDQLPCYLTYTTPKVSDIVRDNLHVNRHVTEE ITGPRYCPSIESKILRFGAKVHQVWLEPEGLDSSLVYPQGISCTLPHDQQ VELVHAIQGLEKAVVVQPGYGVEYDFIDPRELYPTLETKRVPGLFFAGQI NGTTGYEEAAAQGIIAGANAAGKTRHSDGRQLTISRTEGYIGVLIDDLTS LGTNEPYRMFTSRAEFRLSLRPDNADMRLTQKGYEFGLVSSDRYQHFQQT EARLQSAIESLRRLRKHTHYWRQALNLPKAKASVEKSAFDMLGIPADNIT IEQLIHLHPNELSWLKGERNLAERLKIEALYSFFVDEQQRDVEDVRREER LSIPADIDYFSKSLSLSNEERQKLTLIQPQTIAAASRIQGVTPSTIVRIL KYVKKAELAKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11898-PA | 663 | GF11898-PA | 1..663 | 1..661 | 3091 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21052-PA | 661 | GG21052-PA | 1..661 | 1..661 | 3427 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20470-PA | 658 | GH20470-PA | 1..658 | 1..661 | 2794 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4610-PA | 661 | CG4610-PA | 1..661 | 1..661 | 3411 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21007-PA | 663 | GI21007-PA | 1..654 | 1..657 | 2847 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10454-PA | 479 | GL10454-PA | 1..467 | 1..469 | 2229 | 89.8 | Plus |
Dper\GL10455-PA | 154 | GL10455-PA | 1..154 | 508..661 | 680 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18299-PA | 659 | GA18299-PA | 1..659 | 1..661 | 3087 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15919-PA | 661 | GM15919-PA | 1..661 | 1..661 | 3440 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11675-PA | 661 | GD11675-PA | 1..661 | 1..661 | 3454 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21932-PA | 659 | GJ21932-PA | 1..658 | 1..661 | 2857 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22159-PA | 656 | GK22159-PA | 1..655 | 1..661 | 2903 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13994-PA | 661 | GE13994-PA | 1..661 | 1..661 | 3420 | 96.5 | Plus |