BDGP Sequence Production Resources |
Search the DGRC for GH24271
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 242 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | Fmo-1-RA |
Protein status: | GH24271.pep: gold |
Preliminary Size: | 1541 |
Sequenced Size: | 1453 |
Gene | Date | Evidence |
---|---|---|
CG3006 | 2001-01-01 | Release 2 assignment |
CG3006 | 2001-07-04 | Blastp of sequenced clone |
CG3006 | 2003-01-01 | Sim4 clustering to Release 3 |
Fmo-1 | 2008-04-29 | Release 5.5 accounting |
Fmo-1 | 2008-08-15 | Release 5.9 accounting |
Fmo-1 | 2008-12-18 | 5.12 accounting |
1453 bp (1453 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051603
> GH24271.complete GCGTGTAGAAAGCAATCCCGGCCTATCTCACTTAGGATCGCAGCTAGCAA TTAAAATTAATATAAGCTGTAACCAATACTGTAATATGATGAGCGTTTGC ATAATTGGGGCCGGAACCGCGGGTCTTTGCTGTGCCCGCCATTCGATTGC AAATGGGTTCGAGACCACTGTGTTCGAGCTATCTGACCGAATCGGCGGCA CCTGGGTTTACAATGAGGCAACAGGGGCGGTCAATGGCATCGATGTCCAC AGCAGCATGTACAAGAACCTACGAACCAACCTGCCCAAGGAGGTAATGGG CTTCCCGGACTTCGAAATCGGGGCAAACGAGGCTTCCTATGTGAGATCCG ACGAGATCTGCGACTTCCTTAACCAATACGCGAACCATTTCGACCTGAAG AAGCACATCAAGTTCGATAGCTATGTGATTCGAGTTTTGCAGAGGAAAAC AAAGTGGCAAGTACTTTTCAAAGACTTGGTCACCAACAAGATAGAGTTCC AGTACTTCGACAAGGTCTTGGTGGCCAATGGCCACTACCACACTCCGAAT TATAGCCAAATTCCGAATATGGAAAGGTTTAAAGGGCAGTTCCTGCACAG CCACGACTTCAGAAGTAGGGAGGTTTTCGAAGGTAAATCCGTTCTGGTCA TTGGAGCTGGTCCCAGTGGCATGGACCTGTCGAACATCATTTCCCGAACG GCGGATCGGGTCACCATAAGTCACCACTTGACCGATATCGGGCAACACTC ATTCTTCGAGAACGTACAGCAGAAACCCGATGTGCGGGAGCTCGATGAGA AGGGAGCCTTTTTCGTGGACGGATCGTACCAGGAGTTCGACACCGTCTTC TTTTGCACAGGTTACAAGTACGCCTTTCCCTTCCTGACCGTCGACTCGGG CATCTATGTGGAGGACAACTACGTCCAGGAGCTGTACAAGCAGTGCATCA ACATCAGGAACCCATCCATGGCTCTGATCGGACTGCCGTTTTACGTTTGT GCCGCCCAAATGATGGACATCCAAGCGAGGTTCATCATGAGCTACTACAA CGGATCCAACGAGTTGCCGTCCACGGAGGATATGCTCAAGGACACCCGCG ATAGGATGGGCAAACTGTGGGCGGAGGGACTAAGAAAACGCCATGCCCAC ATGCTGGGTCCCAAGCAAATCGACTATTTCACGGACTTGTCGCAAACTGC AGGAGTTAAGAACATCAAGCCTGTGATGACCAAATTGCACAACGAAAGCA GCAAGTGCTTCAATGAGAATTTGCTCCACTTCCGGGAGGACAATTTCGCG ATTCTGGACGACGAGACATTCATTAAACTCAACTAGATCCTGAATCAATC AATAGGAGCATTAGATTCCAAAACATCGTTTTTGGACTTCCCTTCGAAAT AAAATAAATTTCCAATTCTTGTATTCCAAAACAACAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fmo-1-RA | 1562 | Fmo-1-RA | 117..1552 | 1..1436 | 7180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19849851..19850389 | 630..1168 | 2680 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 19849054..19849326 | 1..273 | 1350 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19850454..19850717 | 1169..1432 | 1215 | 97.3 | Plus |
chr2R | 21145070 | chr2R | 19849385..19849575 | 273..463 | 955 | 100 | Plus |
chr2R | 21145070 | chr2R | 19849621..19849800 | 457..636 | 855 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23963772..23964310 | 630..1168 | 2695 | 100 | Plus |
2R | 25286936 | 2R | 23962975..23963247 | 1..273 | 1365 | 100 | Plus |
2R | 25286936 | 2R | 23964375..23964642 | 1169..1436 | 1340 | 100 | Plus |
2R | 25286936 | 2R | 23963306..23963496 | 273..463 | 955 | 100 | Plus |
2R | 25286936 | 2R | 23963542..23963721 | 457..636 | 885 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23964971..23965509 | 630..1168 | 2695 | 100 | Plus |
2R | 25260384 | 2R | 23964174..23964446 | 1..273 | 1365 | 100 | Plus |
2R | 25260384 | 2R | 23965574..23965841 | 1169..1436 | 1340 | 100 | Plus |
2R | 25260384 | 2R | 23964505..23964695 | 273..463 | 955 | 100 | Plus |
2R | 25260384 | 2R | 23964741..23964920 | 457..636 | 885 | 99.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19849054..19849326 | 1..273 | 99 | -> | Plus |
chr2R | 19849386..19849572 | 274..460 | 100 | -> | Plus |
chr2R | 19849625..19849796 | 461..632 | 98 | -> | Plus |
chr2R | 19849854..19850389 | 633..1168 | 99 | -> | Plus |
chr2R | 19850454..19850720 | 1169..1435 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1251 | 86..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1251 | 86..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1251 | 86..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1251 | 86..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1251 | 86..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1435 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1435 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 20..1454 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 1..1435 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-1-RA | 20..1454 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23962975..23963247 | 1..273 | 100 | -> | Plus |
2R | 23963307..23963493 | 274..460 | 100 | -> | Plus |
2R | 23963546..23963717 | 461..632 | 100 | -> | Plus |
2R | 23963775..23964310 | 633..1168 | 100 | -> | Plus |
2R | 23964375..23964641 | 1169..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23962975..23963247 | 1..273 | 100 | -> | Plus |
2R | 23963307..23963493 | 274..460 | 100 | -> | Plus |
2R | 23963546..23963717 | 461..632 | 100 | -> | Plus |
2R | 23963775..23964310 | 633..1168 | 100 | -> | Plus |
2R | 23964375..23964641 | 1169..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23962975..23963247 | 1..273 | 100 | -> | Plus |
2R | 23963307..23963493 | 274..460 | 100 | -> | Plus |
2R | 23963546..23963717 | 461..632 | 100 | -> | Plus |
2R | 23963775..23964310 | 633..1168 | 100 | -> | Plus |
2R | 23964375..23964641 | 1169..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19851898..19852164 | 1169..1435 | 100 | Plus | |
arm_2R | 19850498..19850770 | 1..273 | 100 | -> | Plus |
arm_2R | 19850830..19851016 | 274..460 | 100 | -> | Plus |
arm_2R | 19851069..19851240 | 461..632 | 100 | -> | Plus |
arm_2R | 19851298..19851833 | 633..1168 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23964192..23964464 | 1..273 | 100 | -> | Plus |
2R | 23964524..23964710 | 274..460 | 100 | -> | Plus |
2R | 23964763..23964934 | 461..632 | 100 | -> | Plus |
2R | 23964992..23965527 | 633..1168 | 100 | -> | Plus |
2R | 23965592..23965858 | 1169..1435 | 100 | Plus |
Translation from 0 to 1335
> GH24271.hyp RVESNPGLSHLGSQLAIKINISCNQYCNMMSVCIIGAGTAGLCCARHSIA NGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPKEVMG FPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQRKT KWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHS HDFRSREVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQHS FFENVQQKPDVRELDEKGAFFVDGSYQEFDTVFFCTGYKYAFPFLTVDSG IYVEDNYVQELYKQCINIRNPSMALIGLPFYVCAAQMMDIQARFIMSYYN GSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQTA GVKNIKPVMTKLHNESSKCFNENLLHFREDNFAILDDETFIKLN*
Translation from 85 to 1335
> GH24271.pep MMSVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN GIDVHSSMYKNLRTNLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYAN HFDLKKHIKFDSYVIRVLQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGH YHTPNYSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIGAGPSGMDLSN IISRTADRVTISHHLTDIGQHSFFENVQQKPDVRELDEKGAFFVDGSYQE FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCINIRNPSMALIGL PFYVCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLR KRHAHMLGPKQIDYFTDLSQTAGVKNIKPVMTKLHNESSKCFNENLLHFR EDNFAILDDETFIKLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12882-PA | 416 | GF12882-PA | 1..416 | 1..416 | 1882 | 79.8 | Plus |
Dana\GF13806-PA | 425 | GF13806-PA | 7..419 | 4..414 | 977 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22910-PA | 415 | GG22910-PA | 1..415 | 2..416 | 2121 | 92.5 | Plus |
Dere\GG10818-PA | 429 | GG10818-PA | 11..423 | 4..414 | 978 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20181-PA | 370 | GH20181-PA | 1..361 | 2..362 | 1405 | 67.3 | Plus |
Dgri\GH22902-PA | 427 | GH22902-PA | 9..424 | 1..414 | 960 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fmo-1-PA | 416 | CG3006-PA | 1..416 | 1..416 | 2214 | 100 | Plus |
Fmo-2-PA | 429 | CG3174-PA | 11..423 | 4..414 | 969 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20708-PA | 415 | GI20708-PA | 1..415 | 2..416 | 1622 | 67.7 | Plus |
Dmoj\GI18387-PA | 427 | GI18387-PA | 9..424 | 1..414 | 992 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11186-PA | 415 | GL11186-PA | 1..415 | 2..416 | 1912 | 82.2 | Plus |
Dper\GL20239-PA | 432 | GL20239-PA | 14..426 | 4..414 | 981 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16437-PA | 432 | GA16437-PA | 14..426 | 4..414 | 981 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16071-PA | 416 | GM16071-PA | 1..416 | 1..416 | 2202 | 96.4 | Plus |
Dsec\GM20867-PA | 429 | GM20867-PA | 11..423 | 4..414 | 982 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10319-PA | 429 | GD10319-PA | 11..423 | 4..414 | 982 | 43.8 | Plus |
Dsim\GD15455-PA | 158 | GD15455-PA | 1..155 | 1..157 | 749 | 89.2 | Plus |
Dsim\GD15456-PA | 84 | GD15456-PA | 1..84 | 333..416 | 450 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21889-PA | 415 | GJ21889-PA | 1..415 | 2..416 | 1587 | 67.2 | Plus |
Dvir\GJ21464-PA | 427 | GJ21464-PA | 9..424 | 1..414 | 967 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15849-PA | 415 | GK15849-PA | 1..415 | 2..416 | 1733 | 73.7 | Plus |
Dwil\GK15848-PA | 415 | GK15848-PA | 1..415 | 2..416 | 1641 | 70.4 | Plus |
Dwil\GK19621-PA | 427 | GK19621-PA | 12..424 | 4..414 | 1003 | 45.8 | Plus |