BDGP Sequence Production Resources |
Search the DGRC for GH24292
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 242 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | Drice-RA |
Protein status: | GH24292.pep: gold |
Preliminary Size: | 1976 |
Sequenced Size: | 1949 |
Gene | Date | Evidence |
---|---|---|
CG7788 | 2001-01-01 | Release 2 assignment |
CG7788 | 2001-09-19 | Blastp of sequenced clone |
CG7788 | 2003-01-01 | Sim4 clustering to Release 3 |
Ice | 2008-04-29 | Release 5.5 accounting |
Ice | 2008-08-15 | Release 5.9 accounting |
Ice | 2008-12-18 | 5.12 accounting |
1949 bp (1949 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058451
> GH24292.complete ATCAGGCGCTATTTGGTGTTTTTCAACTGCCAACAACGGTCTTACAGAAT TAAAGACAAAAACGCAATCGACTAAAGTAATTAGTTAATAACTAGCTGTC TTTGTTGCGCGTAAACACGGACTTTCCCCAGAACGAAGCTAATTTGCCCA AGTCGTGCATCCAAGCTTTTCACAGATTTGGAAAAACCTGTTTCGCAGTG CTTGTGACTCATCAGTTTTCGCAGGCTCAAGGAGAGAACTTAGCCATGGA CGCCACTAACAATGGAGAATCCGCCGACCAGGTGGGCATCAGGGTGGGCA ATCCGGAGCAGCCCAACGATCACACAGATGCCCTGGGCTCCGTGGGATCC GGAGGAGCGGGTAGCAGCGGCCTGGTCGCAGGATCCTCGCATCCTTACGG CAGCGGAGCCATTGGGCAGCTGGCCAACGGGTACAGCTCACCCTCGTCCA GCTACCGTAAGAATGTAGCCAAAATGGTCACCGACCGCCATGCAGCCGAG TACAACATGCGCCACAAGAACCGCGGAATGGCACTGATCTTCAACCATGA GCACTTCGAGGTGCCCACCTTGAAGTCTCGCGCGGGAACCAATGTGGACT GCGAGAATCTGACTCGGGTGCTCAAGCAGCTGGACTTCGAAGTGACCGTG TACAAGGACTGCCGCTACAAGGACATTTTGAGGACAATCGAGTATGCAGC GTCGCAGAATCACAGCGATAGTGATTGCATCCTGGTCGCCATCCTGTCGC ACGGCGAGATGGGCTACATCTACGCCAAGGACACACAGTACAAGCTGGAT AACATCTGGAGCTTCTTCACGGCCAATCACTGCCCCTCGCTAGCCGGCAA ACCCAAGTTGTTCTTCATACAGGCCTGCCAGGGCGACAGATTGGATGGCG GAGTGACCATGCAGCGTTCTCAGACGGAAACCGATGGCGACTCCTCGATG AGCTACAAGATTCCAGTGCACGCCGACTTTCTGATCGCCTACTCGACGGT TCCTGGATTCTATTCGTGGCGCAACACCACCCGCGGCAGCTGGTTCATGC AGAGCCTGTGCGCCGAACTGGCGGCCAATGGCAAGCGGCTGGACATCCTG ACCCTGCTCACATTCGTGTGCCAGCGGGTGGCCGTGGACTTTGAGTCCTG CACCCCGGACACTCCGGAGATGCACCAGCAGAAGCAGATACCCTGCATAA CCACCATGCTGACGCGCATTCTGCGTTTCAGCGACAAGCAGTTGGCACCA GCCGGACGGGTTTGATGGCTAATGGTATGGATCAAACGGTGGGTACGGCG AGGTGTGTGATAAACCAAGTCGCAATTAAGTTAGAACCTCATGGGCTATC GGCCTTGCAGCATATTTTTTATACAACACTTTTTTAACCTGCCCAATTGC TCGACGAGATTGGTGCCACTGCCCGTTTTATTTTATTTAGGCACAAAGTA TCTTTCGATTGACATTTATTAATGTCGCATTTACTCGTCTGTATTTATAT TTTTTGGGGTGGGTAGAGTAGATCGATTTAACTTAGAAATCTAAGAGGTT TTTACTCCGGCCAAAATTTTTTGACAATTTTAACTTGCCAACTGAACAAA GACGATCTCAAAATTTTAAATTCTCTACTAAACCTTATCATAGAACAACT TGCGCCTCTTTGATTCTCGATCAGGAATGTCGGCCCACCCTTATCTATAT CTACCTTAGACCATTTACAGACAAGACCTTTTTACAATTTTATACACATA GATATCTTTATAGTATAAGCCTGTGTGTCATGGTCGTCCAAAACGAAAAC AAACGATTTTAGCCTGTAGTCGAGTGTTTTATGAACAATATATACTATTT CTATGCCATTTGTACTCTTATATAATGCACATTAGCAAATGTTCTCCTTT CAAGTTAACCGCTAATAAATCCGATTGAAAACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ice-RA | 1933 | Ice-RA | 1..1933 | 1..1933 | 9665 | 100 | Plus |
Dcp-1-RA | 1985 | Dcp-1-RA | 872..1024 | 734..886 | 360 | 82.3 | Plus |
Dcp-1-RA | 1985 | Dcp-1-RA | 1080..1189 | 942..1051 | 190 | 78.1 | Plus |
Dcp-1-RA | 1985 | Dcp-1-RA | 1317..1377 | 1179..1239 | 185 | 86.8 | Plus |
Dcp-1-RA | 1985 | Dcp-1-RA | 628..685 | 490..547 | 155 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25622222..25624139 | 1..1932 | 9290 | 99 | Plus |
chr2R | 21145070 | chr2R | 19438918..19439181 | 734..997 | 405 | 76.9 | Plus |
chr2R | 21145070 | chr2R | 19439345..19439483 | 1101..1239 | 230 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29799653..29801586 | 1..1934 | 9670 | 100 | Plus |
2R | 25286936 | 2R | 23552592..23552855 | 734..997 | 405 | 76.9 | Plus |
2R | 25286936 | 2R | 23553019..23553157 | 1101..1239 | 230 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29540484..29542417 | 1..1934 | 9670 | 100 | Plus |
2R | 25260384 | 2R | 23553791..23553943 | 734..886 | 360 | 82.3 | Plus |
2R | 25260384 | 2R | 23554296..23554356 | 1179..1239 | 185 | 86.8 | Plus |
2R | 25260384 | 2R | 23553999..23554054 | 942..997 | 160 | 85.7 | Plus |
2R | 25260384 | 2R | 23553547..23553604 | 490..547 | 155 | 84.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25622222..25624139 | 1..1932 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1020 | 246..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1020 | 246..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1020 | 246..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1020 | 246..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drice-RA | 1..1020 | 246..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1932 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1932 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1927 | 6..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice-RA | 1..1932 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drice-RA | 1..1927 | 6..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29799653..29801584 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29799653..29801584 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29799653..29801584 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25625375..25627306 | 1..1932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29540484..29542415 | 1..1932 | 100 | Plus |
Translation from 245 to 1264
> GH24292.pep MDATNNGESADQVGIRVGNPEQPNDHTDALGSVGSGGAGSSGLVAGSSHP YGSGAIGQLANGYSSPSSSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFN HEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEY AASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANHCPSLA GKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYS TVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFE SCTPDTPEMHQQKQIPCITTMLTRILRFSDKQLAPAGRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18666-PA | 338 | GF18666-PA | 1..338 | 1..339 | 1576 | 88.5 | Plus |
Dana\GF13064-PA | 326 | GF13064-PA | 60..319 | 72..331 | 1060 | 71.9 | Plus |
Dana\GF17937-PA | 309 | GF17937-PA | 56..299 | 94..324 | 407 | 36 | Plus |
Dana\GF10584-PA | 450 | GF10584-PA | 161..409 | 63..288 | 231 | 25.2 | Plus |
Dana\GF13826-PA | 525 | GF13826-PA | 264..523 | 39..330 | 216 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22866-PA | 323 | GG22866-PA | 29..316 | 25..331 | 1050 | 62.2 | Plus |
Dere\GG16826-PA | 308 | GG16826-PA | 56..305 | 94..331 | 420 | 35.6 | Plus |
Dere\GG10839-PA | 531 | GG10839-PA | 275..529 | 45..330 | 235 | 28.9 | Plus |
Dere\GG12750-PA | 503 | GG12750-PA | 265..495 | 88..312 | 232 | 31.3 | Plus |
Dere\GG15422-PA | 451 | GG15422-PA | 174..411 | 72..285 | 228 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19956-PA | 351 | GH19956-PA | 14..348 | 8..337 | 1425 | 81 | Plus |
Dgri\GH19945-PA | 294 | GH19945-PA | 5..291 | 53..337 | 1019 | 65.6 | Plus |
Dgri\GH21208-PA | 318 | GH21208-PA | 24..313 | 28..331 | 981 | 57.9 | Plus |
Dgri\GH13138-PA | 292 | GH13138-PA | 36..279 | 85..330 | 607 | 49.4 | Plus |
Dgri\GH20516-PA | 309 | GH20516-PA | 57..307 | 94..332 | 404 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drice-PA | 339 | CG7788-PA | 1..339 | 1..339 | 1795 | 100 | Plus |
Dcp-1-PA | 323 | CG5370-PA | 57..316 | 72..331 | 980 | 67.7 | Plus |
Decay-PA | 308 | CG14902-PA | 56..305 | 94..331 | 405 | 35.6 | Plus |
Strica-PB | 527 | CG7863-PB | 317..525 | 98..330 | 232 | 32.5 | Plus |
Strica-PA | 527 | CG7863-PA | 317..525 | 98..330 | 232 | 32.5 | Plus |
Dredd-PD | 488 | CG7486-PD | 253..480 | 88..312 | 201 | 30.1 | Plus |
Dronc-PA | 450 | CG8091-PA | 187..410 | 86..288 | 199 | 24 | Plus |
Dredd-PG | 440 | CG7486-PG | 199..432 | 88..312 | 195 | 29.3 | Plus |
Dredd-PE | 494 | CG7486-PE | 253..486 | 88..312 | 195 | 29.3 | Plus |
Damm-PB | 255 | CG18188-PB | 42..218 | 98..291 | 155 | 24.5 | Plus |
Damm-PA | 255 | CG18188-PA | 42..218 | 98..291 | 155 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22043-PA | 345 | GI22043-PA | 14..344 | 8..338 | 1461 | 82 | Plus |
Dmoj\GI20496-PA | 318 | GI20496-PA | 41..311 | 57..331 | 993 | 63.3 | Plus |
Dmoj\GI22869-PA | 295 | GI22869-PA | 7..295 | 34..328 | 691 | 45.6 | Plus |
Dmoj\GI10391-PA | 539 | GI10391-PA | 28..244 | 64..275 | 362 | 36.7 | Plus |
Dmoj\GI12317-PA | 451 | GI12317-PA | 186..402 | 75..279 | 260 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23515-PA | 344 | GL23515-PA | 16..344 | 11..339 | 1572 | 89.4 | Plus |
Dper\GL16870-PA | 323 | GL16870-PA | 49..316 | 64..331 | 981 | 64.9 | Plus |
Dper\GL11317-PA | 257 | GL11317-PA | 8..252 | 83..331 | 809 | 59.8 | Plus |
Dper\GL27295-PA | 308 | GL27295-PA | 56..305 | 94..331 | 432 | 36.8 | Plus |
Dper\GL12563-PA | 457 | GL12563-PA | 167..417 | 63..285 | 222 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20588-PA | 344 | GA20588-PA | 16..344 | 11..339 | 1577 | 89.7 | Plus |
Dpse\GA18828-PA | 323 | GA18828-PA | 49..316 | 64..331 | 982 | 64.9 | Plus |
Dpse\GA24681-PA | 261 | GA24681-PA | 8..256 | 83..331 | 880 | 63.1 | Plus |
Dpse\GA13340-PA | 308 | GA13340-PA | 56..305 | 94..331 | 432 | 36.8 | Plus |
Dpse\GA20817-PA | 457 | GA20817-PA | 167..417 | 63..285 | 225 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12823-PA | 343 | GM12823-PA | 1..343 | 1..339 | 1815 | 98 | Plus |
Dsec\GM16025-PA | 323 | GM16025-PA | 57..316 | 72..331 | 1019 | 68.1 | Plus |
Dsec\GM15423-PA | 308 | GM15423-PA | 56..305 | 94..331 | 420 | 36 | Plus |
Dsec\GM16490-PA | 526 | GM16490-PA | 316..524 | 98..330 | 255 | 32.1 | Plus |
Dsec\GM25197-PA | 449 | GM25197-PA | 189..409 | 86..288 | 227 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21467-PA | 343 | GD21467-PA | 1..343 | 1..339 | 1824 | 98.3 | Plus |
Dsim\GD11774-PA | 323 | GD11774-PA | 57..316 | 72..331 | 1019 | 68.1 | Plus |
Dsim\GD20281-PA | 302 | GD20281-PA | 56..299 | 94..331 | 352 | 32.4 | Plus |
Dsim\GD14228-PA | 449 | GD14228-PA | 189..409 | 86..288 | 236 | 27 | Plus |
Dsim\GD10341-PA | 160 | GD10341-PA | 4..158 | 153..330 | 188 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24096-PA | 345 | GJ24096-PA | 12..344 | 8..338 | 1460 | 83.6 | Plus |
Dvir\GJ22346-PA | 314 | GJ22346-PA | 11..308 | 14..332 | 1063 | 61.4 | Plus |
Dvir\GJ23418-PA | 300 | GJ23418-PA | 6..294 | 39..330 | 763 | 52 | Plus |
Dvir\GJ19552-PA | 271 | GJ19552-PA | 16..265 | 83..331 | 727 | 56 | Plus |
Dvir\GJ22849-PA | 310 | GJ22849-PA | 57..300 | 94..324 | 418 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11928-PA | 346 | GK11928-PA | 11..346 | 4..339 | 1493 | 84.1 | Plus |
Dwil\GK11926-PA | 256 | GK11926-PA | 1..256 | 77..331 | 1128 | 78.9 | Plus |
Dwil\GK23280-PA | 330 | GK23280-PA | 59..326 | 68..337 | 1036 | 68.6 | Plus |
Dwil\GK11927-PA | 255 | GK11927-PA | 1..255 | 77..331 | 991 | 67.1 | Plus |
Dwil\GK11868-PA | 311 | GK11868-PA | 56..308 | 94..331 | 395 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23886-PA | 339 | GE23886-PA | 1..339 | 1..339 | 1792 | 96.8 | Plus |
Dyak\GE14302-PA | 325 | GE14302-PA | 12..318 | 30..331 | 1045 | 61.6 | Plus |
Dyak\GE26146-PA | 308 | GE26146-PA | 56..305 | 94..331 | 409 | 35.2 | Plus |
Dyak\GE21731-PA | 451 | GE21731-PA | 162..411 | 63..288 | 235 | 26.7 | Plus |
Dyak\Dredd-PA | 507 | GE16575-PA | 262..499 | 81..312 | 233 | 30.8 | Plus |
Translation from 245 to 1264
> GH24292.hyp MDATNNGESADQVGIRVGNPEQPNDHTDALGSVGSGGAGSSGLVAGSSHP YGSGAIGQLANGYSSPSSSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFN HEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEY AASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANHCPSLA GKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYS TVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFE SCTPDTPEMHQQKQIPCITTMLTRILRFSDKQLAPAGRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drice-PA | 339 | CG7788-PA | 1..339 | 1..339 | 1795 | 100 | Plus |
Dcp-1-PA | 323 | CG5370-PA | 57..316 | 72..331 | 980 | 67.7 | Plus |
Decay-PA | 308 | CG14902-PA | 56..305 | 94..331 | 405 | 35.6 | Plus |
Strica-PB | 527 | CG7863-PB | 317..525 | 98..330 | 232 | 32.5 | Plus |
Strica-PA | 527 | CG7863-PA | 317..525 | 98..330 | 232 | 32.5 | Plus |