BDGP Sequence Production Resources |
Search the DGRC for GH24506
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 245 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | Uba3-RA |
Protein status: | GH24506.pep: gold |
Sequenced Size: | 1457 |
Gene | Date | Evidence |
---|---|---|
CG13343 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13343 | 2008-04-29 | Release 5.5 accounting |
CG13343 | 2008-08-15 | Release 5.9 accounting |
CG13343 | 2008-12-18 | 5.12 accounting |
1457 bp (1457 high quality bases) assembled on 2005-06-20
GenBank Submission: BT023713
> GH24506.complete AAAAATGTCTGTCCACTCACCCAATCCTGGCTTAATCCTCCAGAGCAAGC GTTTCAATGGACTGCGGAACATCCTGGAACGCGAAGGTCCCTTCTGCAAG GACGGTTTCGCGGCCTCGTCGGAAAACCTGGAGTTCTTGCAGACCAAGTG CCAGGTTCTGATCATCGGAGCCGGTGGCCTGGGCTGCGAACTGCTGAAGG ATCTGGCTCTGATGGGCTTCGGCAACCTGCACGTCATCGACATGGACACC ATCGAGCTGTCCAACCTGAATCGCCAGTTTCTGTTCCGTCGCACAGACAT TGGCGCCTCCAAGGCGGAGTGTGCGGCTCGCTTCATCAACGCAAGAGTGC CTACTTGCCGGGTGACGCCGCATTTCAAGAAAATCCAGGACTTCGATGAG TCCTTCTATCAGCAGTTCCACCTGGTTGTCTGTGGCCTAGACTCCATTGT CGCCCGGCGTTGGATCAATGGCATGCTGCTATCAATGCTGCGATATGAGG AGGACGGCACCATAGATACCAGCTCCATAGTGCCCATGATTGATGGCGGC ACCGAGGGCTTCAAGGGGAACGCACGCGTCATCCTGCCCGGTTTCACGGC CTGCATTGAGTGCACGCTGGACCTGTTCCCGCCGCAGGTCAACTATCCCC TATGCACCATAGCAAATACTCCCAGGCTTCCGGAGCATTGCATTGAGTAC GTAAAGATCATACAGTGGGAGAAACAGAATCCGTTTGGAGTGCCCCTCGA TGGGGACGATCCCCAGCACATTGGTTGGATCTACGAACGGGCACTGGAGC GGTCCAATGAGTTTAACATCACCGGAGTGACCTATCGCTTGGTCCAGGGC GTTGTCAAGCACATCATTCCAGCTGTGGCCAGTACCAATGCAGCCATTGC CGCCGCCTGTGCTTTGGAGGTCTTTAAGTTGGCCACCAGCTGCTATGACA GCATGGCAAACTACCTGAACTTCAACGACCTGGACGGAATCTATACCTAC ACCTACGAGGCCGAGAAGTCGGAAAACTGCTTGGCGTGCAGCAATACACC GCAGCCGTTGCCGATTGAGGATCCCAACACCACCACGCTGGAGGATGTGA TAAAGCTATTGTGTGATTCCCCGCGTTTCCAGCTGAAAAGCCCAGCCTTG ACCACTGTGATGAAGGACGGCAAGCGGCGGACTTTGTACATGTCCGGGGT AAAGAGCATTGAAGAGGCCACCCGAAAGAACCTTACTCAGAGCCTGGGCG AACTGGGTCTACACGATGGACAGCAGCTCACAGTCACCGATGCCACCTCG CCGTCCGCCATGACTCTGCAGCTGAAGTATCAGTCCAATGAGGTGGAGAT GGTCTAAAGTGTATCACAGTAGATAACAATTTTAATACACAAGTCGTATA TGTAAATAAACAGCAGGCTTAGCCTCGAGTTACGCATCTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13343-RA | 1481 | CG13343-RA | 38..1479 | 1..1442 | 7210 | 100 | Plus |
CG16935.a | 1011 | CG16935.a | 925..1011 | 1442..1356 | 435 | 100 | Minus |
CG16935-RA | 1316 | CG16935-RA | 1230..1316 | 1442..1356 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9746345..9747783 | 1..1439 | 7195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13858994..13860435 | 1..1442 | 7210 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13860193..13861634 | 1..1442 | 7210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9746345..9747783 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 1..1353 | 5..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 1..1353 | 5..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uba3-RA | 1..1353 | 5..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 1..1353 | 5..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uba3-RA | 1..1353 | 5..1357 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 38..1476 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 38..1476 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uba3-RA | 43..1481 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13343-RA | 38..1476 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uba3-RA | 43..1481 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13858994..13860432 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13858994..13860432 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13858994..13860432 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9746499..9747937 | 1..1439 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13860193..13861631 | 1..1439 | 100 | Plus |
Translation from 0 to 1356
> GH24506.hyp KMSVHSPNPGLILQSKRFNGLRNILEREGPFCKDGFAASSENLEFLQTKC QVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDI GASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIV ARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTA CIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFGVPLD GDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIA AACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCLACSNTP QPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGV KSIEEATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQSNEVEM V*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uba3-PA | 450 | CG13343-PA | 1..450 | 2..451 | 2363 | 100 | Plus |
Uba2-PA | 700 | CG7528-PA | 13..207 | 43..253 | 369 | 39.4 | Plus |
Uba1-PC | 1008 | CG1782-PC | 426..601 | 54..235 | 255 | 33.5 | Plus |
Uba1-PA | 1191 | CG1782-PA | 609..784 | 54..235 | 255 | 33.5 | Plus |
Translation from 1 to 1356
> GH24506.pep KMSVHSPNPGLILQSKRFNGLRNILEREGPFCKDGFAASSENLEFLQTKC QVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDI GASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIV ARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTA CIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFGVPLD GDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIA AACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCLACSNTP QPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGV KSIEEATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQSNEVEM V*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13717-PA | 450 | GF13717-PA | 1..450 | 2..451 | 2223 | 88.9 | Plus |
Dana\GF10481-PA | 691 | GF10481-PA | 12..192 | 42..235 | 375 | 39.3 | Plus |
Dana\GF11487-PA | 1191 | GF11487-PA | 608..784 | 53..235 | 271 | 33.3 | Plus |
Dana\GF15533-PA | 451 | GF15533-PA | 92..239 | 52..211 | 153 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20409-PA | 450 | GG20409-PA | 1..449 | 2..450 | 2386 | 98 | Plus |
Dere\GG14919-PA | 703 | GG14919-PA | 13..192 | 43..235 | 383 | 41 | Plus |
Dere\GG25268-PA | 1189 | GG25268-PA | 606..782 | 53..235 | 269 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21039-PA | 451 | GH21039-PA | 1..450 | 2..450 | 2130 | 85.6 | Plus |
Dgri\GH15287-PA | 707 | GH15287-PA | 15..192 | 44..235 | 377 | 40.7 | Plus |
Dgri\GH22854-PA | 1244 | GH22854-PA | 661..837 | 53..235 | 280 | 34.4 | Plus |
Dgri\GH10959-PA | 449 | GH10959-PA | 89..237 | 52..211 | 151 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uba3-PA | 450 | CG13343-PA | 1..450 | 2..451 | 2363 | 100 | Plus |
Uba2-PA | 700 | CG7528-PA | 13..207 | 43..253 | 369 | 39.4 | Plus |
Uba1-PC | 1008 | CG1782-PC | 426..601 | 54..235 | 255 | 33.5 | Plus |
Uba1-PA | 1191 | CG1782-PA | 609..784 | 54..235 | 255 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18642-PA | 451 | GI18642-PA | 1..451 | 2..451 | 2171 | 87.1 | Plus |
Dmoj\GI11997-PA | 700 | GI11997-PA | 13..192 | 43..235 | 377 | 40.5 | Plus |
Dmoj\GI21231-PA | 1198 | GI21231-PA | 615..791 | 53..235 | 275 | 33.9 | Plus |
Dmoj\GI10453-PA | 452 | GI10453-PA | 91..239 | 52..211 | 154 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17480-PA | 450 | GL17480-PA | 1..449 | 2..450 | 2227 | 90.6 | Plus |
Dper\GL22481-PA | 687 | GL22481-PA | 13..207 | 43..253 | 391 | 39.9 | Plus |
Dper\GL17328-PA | 627 | GL17328-PA | 44..220 | 53..235 | 287 | 34.9 | Plus |
Dper\GL26133-PA | 451 | GL26133-PA | 92..239 | 52..211 | 157 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12220-PA | 450 | GA12220-PA | 1..449 | 2..450 | 2227 | 90.6 | Plus |
Dpse\GA20416-PA | 697 | GA20416-PA | 13..207 | 43..253 | 393 | 39.9 | Plus |
Dpse\GA14681-PA | 1184 | GA14681-PA | 601..777 | 53..235 | 288 | 34.9 | Plus |
Dpse\GA28952-PA | 58 | GA28952-PA | 1..51 | 387..437 | 219 | 86.3 | Plus |
Dpse\GA12041-PA | 451 | GA12041-PA | 92..239 | 52..211 | 157 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21498-PA | 450 | GM21498-PA | 1..450 | 2..451 | 2399 | 98.7 | Plus |
Dsec\GM24970-PA | 701 | GM24970-PA | 13..192 | 43..235 | 384 | 41 | Plus |
Dsec\GM20586-PA | 1191 | GM20586-PA | 608..784 | 53..235 | 269 | 33.3 | Plus |
Dsec\GM17034-PA | 453 | GM17034-PA | 94..241 | 52..211 | 158 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10991-PA | 294 | GD10991-PA | 1..293 | 158..450 | 1568 | 99.3 | Plus |
Dsim\GD10990-PA | 144 | GD10990-PA | 1..133 | 2..134 | 702 | 98.5 | Plus |
Dsim\GD13019-PA | 701 | GD13019-PA | 13..192 | 43..235 | 384 | 41 | Plus |
Dsim\GD10057-PA | 1191 | GD10057-PA | 608..784 | 53..235 | 269 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21656-PA | 451 | GJ21656-PA | 1..451 | 2..451 | 2151 | 86.7 | Plus |
Dvir\GJ12222-PA | 697 | GJ12222-PA | 13..192 | 43..235 | 376 | 40.5 | Plus |
Dvir\GJ20835-PA | 1230 | GJ20835-PA | 647..823 | 53..235 | 284 | 34.4 | Plus |
Dvir\GJ21670-PA | 452 | GJ21670-PA | 92..240 | 52..211 | 156 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21978-PA | 450 | GK21978-PA | 1..450 | 2..451 | 2157 | 87.4 | Plus |
Dwil\GK19989-PA | 747 | GK19989-PA | 13..192 | 43..235 | 371 | 39.5 | Plus |
Dwil\GK15620-PA | 1209 | GK15620-PA | 621..802 | 48..235 | 280 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12570-PA | 450 | GE12570-PA | 1..450 | 2..451 | 2398 | 98.2 | Plus |
Dyak\GE20372-PA | 705 | GE20372-PA | 13..192 | 43..235 | 383 | 41 | Plus |
Dyak\GE22126-PA | 1189 | GE22126-PA | 606..782 | 53..235 | 269 | 33.3 | Plus |
Dyak\GE18783-PA | 453 | GE18783-PA | 94..241 | 52..211 | 153 | 30 | Plus |