BDGP Sequence Production Resources |
Search the DGRC for GH24548
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 245 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1958-RA |
Protein status: | GH24548.pep: gold |
Preliminary Size: | 833 |
Sequenced Size: | 952 |
Gene | Date | Evidence |
---|---|---|
CG1958 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1958 | 2002-05-18 | Blastp of sequenced clone |
CG1958 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1958 | 2008-04-29 | Release 5.5 accounting |
CG1958 | 2008-08-15 | Release 5.9 accounting |
CG1958 | 2008-12-18 | 5.12 accounting |
952 bp (952 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118817
> GH24548.complete TTTATATACCTTCGTTTTTCGTCTTTTTTCTAGAAACGAACAAAATTTAA AGTCAACAAAATCTCCATTGTGCTTTACTTTTCTGCTAAACATGTCGAAG GCAACAAAGCTGCGATTCGCACTGATCACCGAGGATGTGCTGGACAAGCT GAGGCCTCGCTCACAGTCGGAAAATGCACGATCGAAGTACATGAATGAAA TATATGAGGCCATTAGGATGGCGGTCAACGAGGTTGTGGACGAGAAGATG GAGCAGCTGAATGATACAGTTAATCGAATGGTTGAGGAGCGGGTGAGCAA AATTCTGGACCATCACTTGACCAAGGGATCGTTGACGGGGCGCAGTAGCT CAGTTGGAAGGAAAAGGGATTTGGATAATAGGGAAATCAAGGGAGCAAGG TATGCTGCTCCAGCCACATCAATTAGTTCCCTAAAAGTTTCCAATCTCAA ACGTGGCCGAAGCAAGAGGCAAAATCCCACCAAAGAGCATGTGACCTTCG CCTCCGACGATCAGTTGACTAAAAGGTCTAGGACCAAGGCGCAGAAAATC ACTGTAATGCCCATACATCGCGAGAGCCAGGTGAAAAGTACTCCCTCGTA CGGCGACAGCAACCACAACAACACACCGATGCAAACACCTTCACCACCAC TTAGCACGGATTGCAATAAGCTGGATGAGGACGATTACTATAACTTCTCT GATGTGGAGGAACCCTCGATTCTAAGCATGGCTGCTAGGTATCTCAAGAA ACTCGAAGATGCCCGCCGTCGAAAGCACGCACAATAGCTTAGGTAGCCTG TACTTCAAACTTTCGTAGATACTTCTTCATATTTCTCGTCAACTCGTCAA CTCAATTTTCAAAGTGAGCGTGTATATATACCATTAAAACAATGGATTCG GTAAAAAAAAAAACTAAATAAATTAACCGAAAATAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1958-RA | 978 | CG1958-RA | 47..978 | 1..932 | 4660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7158881..7159814 | 1..934 | 4670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7266950..7267885 | 1..936 | 4680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7275048..7275983 | 1..936 | 4680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7158881..7159814 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 1..696 | 92..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 1..696 | 92..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 1..696 | 92..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 1..696 | 92..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 1..696 | 92..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 47..978 | 1..932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 47..978 | 1..932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 47..980 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 47..978 | 1..932 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1958-RA | 47..980 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7266950..7267883 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7266950..7267883 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7266950..7267883 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7160983..7161916 | 1..934 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7275048..7275981 | 1..934 | 100 | Plus |
Translation from 0 to 786
> GH24548.hyp LYTFVFRLFSRNEQNLKSTKSPLCFTFLLNMSKATKLRFALITEDVLDKL RPRSQSENARSKYMNEIYEAIRMAVNEVVDEKMEQLNDTVNRMVEERVSK ILDHHLTKGSLTGRSSSVGRKRDLDNREIKGARYAAPATSISSLKVSNLK RGRSKRQNPTKEHVTFASDDQLTKRSRTKAQKITVMPIHRESQVKSTPSY GDSNHNNTPMQTPSPPLSTDCNKLDEDDYYNFSDVEEPSILSMAARYLKK LEDARRRKHAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1958-PA | 231 | CG1958-PA | 1..231 | 31..261 | 1170 | 100 | Plus |
Translation from 91 to 786
> GH24548.pep MSKATKLRFALITEDVLDKLRPRSQSENARSKYMNEIYEAIRMAVNEVVD EKMEQLNDTVNRMVEERVSKILDHHLTKGSLTGRSSSVGRKRDLDNREIK GARYAAPATSISSLKVSNLKRGRSKRQNPTKEHVTFASDDQLTKRSRTKA QKITVMPIHRESQVKSTPSYGDSNHNNTPMQTPSPPLSTDCNKLDEDDYY NFSDVEEPSILSMAARYLKKLEDARRRKHAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20936-PA | 283 | GF20936-PA | 1..268 | 1..228 | 413 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19636-PA | 226 | GG19636-PA | 1..224 | 1..229 | 807 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1958-PA | 231 | CG1958-PA | 1..231 | 1..231 | 1170 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15942-PA | 199 | GI15942-PA | 10..89 | 6..86 | 140 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14691-PA | 244 | GL14691-PA | 1..145 | 1..161 | 166 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15152-PA | 244 | GA15152-PA | 1..145 | 1..161 | 170 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17511-PA | 232 | GM17511-PA | 1..230 | 1..230 | 1009 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16838-PA | 232 | GD16838-PA | 1..230 | 1..230 | 1016 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14848-PA | 220 | GJ14848-PA | 10..80 | 6..75 | 142 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16387-PA | 236 | GK16387-PA | 1..229 | 1..228 | 203 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15706-PA | 239 | GE15706-PA | 1..239 | 1..231 | 880 | 76.2 | Plus |