Clone GH24787 Report

Search the DGRC for GH24787

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:247
Well:87
Vector:pOT2
Associated Gene/TranscriptCG6745-RA
Protein status:GH24787.pep: gold
Preliminary Size:2928
Sequenced Size:2755

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6745 2001-01-01 Release 2 assignment
CG6745 2003-01-15 Blastp of sequenced clone
CG6745 2008-04-29 Release 5.5 accounting
CG6745 2008-08-15 Release 5.9 accounting
CG6745 2008-12-18 5.12 accounting

Clone Sequence Records

GH24787.complete Sequence

2755 bp (2755 high quality bases) assembled on 2003-01-15

GenBank Submission: AY069192

> GH24787.complete
TGGATTTCATTTGCCGACAAATTTTCAAACGCGAATTTTGAACCAAGATG
GGCAAGGATCGGGGCAGAGGACGTAGGAATAACCATTCCGGGCCATACAA
CAAGAGCAACTGGCGTGGTCAGAAGAAGGATCGCCCCCAAAACAATGGTG
GCGGTCAGCGCAACAGTGCTCCACAACAGAAATCCACGCTGCTGGAGACC
CAAGTGGGCATTACGGAGTTCACTAACCCGGAGGCACCTGGCTTCACGGG
AATACTTAAGTCTCGCTTCTCTGATTTTCACGTGAACGAGATTGATAGCA
ATGGAAAGGTTCTGGAACTGAACGATCTCAGTGTGCCTAAAGTGGCTATT
GTGGCTGTGGCCGAAAACGAACTGGACAACTGGCGGAAAGAACTGGAGGC
AGTAATCGGCCCGGAAGTTTGGCAGGATATAGCCAATCTGGCTAAGGCCA
AAAACGATCCCGCGATCGAGCAAAAGGTGGAGATTGATGTGACCACTCTG
GATAAGGAGCAGCGAACACAAGTCCACCAGATGATAAAACAGCTTTACAA
GGGCAAGCTACTGTCCACAACCATTGGACAGCAGCAGGCTAAGCCGAAGG
TCCAGGAGGAGGCATCTTTGGAAAATAAGGATGCGGCTGAAGGTGAAACC
TCAACCCAGAAAGACTCACAGGTGCCGGCAGAGGAGAAGAAGACTATAAA
AGTATTTAAACCAAAGCCAGGACGCGGTGACAAACGCTGGAGCTTTCCGG
CGGATTACGTGACCTTCCTGGTGCACAAAACCAATTTGGTTACCAGCGAT
GTGGCCTCTACTTTAGCAGCGCGACTGAACTTACGACCATCGCAGGTGAA
CTACAGCGGCATCAAGGACAAGCGGGCCAAAACCACCCAGAAGTTCTCCG
TCAAGCGTCGTACACCAGAGAGCATTTTGGTTGCAGCTCGCTCCCAACGG
AATGTTCATATCGGCAACTTTGGATTCGAATCCAATACACTGAAGCTAGG
CGATTTGCAGGGCAATCGTTTTCGTATTGCCTTGCGACACATTGCCAAGG
AGAAGCGAGAAGAAATCGAGCAGGCACTGCAATCATTGAAGGAACGCGGC
TTCATCAACTACTATGGCTTGCAGCGGTTCGGCAACAGCGCCAGTGTCCC
AACCTATGAGGTGGGTGTTGCTCTGCTCAAGCACGATTACAAACTGGCCT
GCGAACTGATCCTGAAACCCCGGGACTCGGATGTGGAGTTTTTGCGTCCC
ATACGCGAGGAGTGGTGGAAAAATCGCGACTCCGCGGCGGCAGCTGCACA
GATCTACGGCGAAAAGTTCATCGAAAAGAAGCTGCTGGACGGCTTGGCCA
GATTTGGTGAATCAGATTACTCATCAGCTCTGCGGCAGATACCACGCAAC
ATGCTCATGCTATATCCACATGCTTACCAAAGCCTGATCTTCAACAGGAT
AGCGTCTAGACGAATTAAGGAGTTCGGCTTGAAATTGATACCCGGGGATT
TGGTTTATGTGGAGCAGGATCAGTCGGAAGCCTCGGAAGAGCAGGCGCAG
CAGGGCGAGGCCTTGGAAGAGCAAAAAGAAGAGGAGCCTAACGATGAACC
TCTGGAAGTCCCCGAAGGGGATGAAGCCATCGAAGAGGAGTCGATTTTCA
AGCGAAAGGTTCGCCCGCTCACAGCAGAAGACATCGCTAGCGGCAAGTAC
AAACTTTGCGATGTGGTCCTTCCCCTGCCTGGACACGACATCACCTATCC
CAGCAACGAGTGCGGCGCGTGGTACGAGGAAATGCTCGCCGAAGTGGGTC
TTTCCTCGGATCAACTGAAGCACAAGGAGAAGACATACGCATTGGCTGGC
GCCTACCGCAAGATGATCATATCGTCCAGTGATCTCAAGTGGAGCTTTAG
AATGTACAATACGCCGGAGGATACACTTATCGCCTCCGACTGGGAGCTAT
TGAAGAACATTCCGGTTGCACCAGAACCAGCTGAAGCTGAGGCCAATTAC
ATGGCACTCCTGCTGGAGTTCTCGCTGCCCACGGCTGCCTATGCCACCAT
GTTTTTGCGAGAACTCTTAAAGCAGGACACATCGTCAGCATCGCAAACGC
AGTTGGAGAAACAGGCAATGGCTAAGGAGGACAATGAAAAGAAGGCGGTA
GGAACCCAGGAGGAACAAATGGAGGTGGTAAAGGAGGTGGCCGACGAGGA
TGGGCAGGAAACTGAGCAGGCGGAAACTCAGGGGGCCGAGGAGGCGGTGT
AGGCCAAGTGAGATACCGAAAATCAATATGCTCAGGAAATCAATTTTACG
CGCGCTTCGTATCCAACTTCGAACCAACCACAACAATAACAATGCGCACG
TGAGGACGAGGGCTGCTCCCTCTCTCTCTCTCTCTCACTGTCGCATCCCG
TGGCTCGCACCCCGTCAATCTCAATCGCTCTCTCTCTCTCTCTCTCTCTC
GCCTGGGAGAGTCCTTTTGGTCCTGTTTCTTTGACTGCGATTTTATTCGT
TCGGTGGCCACCAACGCGAAAGCTCAAGCGACGCGCTGCGCAGTTTCCCC
AGCTCAAAAGTCCAAGTCGCACGGTTTTCCCCAGCGTTCTCAATGAAGAG
CAATAACAAATTATTAATTGACAACAAATAACGAACAAGCACGGTCCCCC
AAAAATCCACGGACTCCATCCAATTCATCCAGTGATTTAAAGAGATTTTA
AACCAAATAAAAAAACCAAGAGGCGAGACAAGGTGAAAAAAAAAAAAAAA
AAAAA

GH24787.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG6745-RA 2771 CG6745-RA 1..2737 1..2737 13685 100 Plus
CG6765-RA 3322 CG6765-RA 1..244 2494..2737 1220 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8503066..8504970 830..2735 8945 98.4 Plus
chr3L 24539361 chr3L 8502487..8502861 354..728 1755 97.9 Plus
chr3L 24539361 chr3L 8502233..8502426 161..354 955 99.5 Plus
chr3L 24539361 chr3L 8502013..8502178 1..166 800 98.8 Plus
chr3L 24539361 chr3L 8502914..8503017 726..829 520 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:06:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8511102..8513009 830..2737 9540 100 Plus
3L 28110227 3L 8510512..8510886 354..728 1875 100 Plus
3L 28110227 3L 8510258..8510451 161..354 955 99.5 Plus
3L 28110227 3L 8510038..8510203 1..166 830 100 Plus
3L 28110227 3L 8510939..8511042 726..829 520 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8504202..8506109 830..2737 9540 100 Plus
3L 28103327 3L 8503612..8503986 354..728 1875 100 Plus
3L 28103327 3L 8503358..8503551 161..354 955 99.4 Plus
3L 28103327 3L 8503138..8503303 1..166 830 100 Plus
3L 28103327 3L 8504039..8504142 726..829 520 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:54:24 has no hits.

GH24787.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:55:35 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8502013..8502178 1..166 98 -> Plus
chr3L 8502239..8502426 167..354 100 -> Plus
chr3L 8502488..8502859 355..726 97 -> Plus
chr3L 8502915..8503017 727..829 100 -> Plus
chr3L 8503066..8504970 830..2735 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:55:28 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2205 48..2252 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:56:23 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2205 48..2252 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:03:29 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2205 48..2252 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:47:19 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2205 48..2252 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:22:16 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2205 48..2252 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:12:06 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2732 1..2732 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:56:23 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2732 1..2732 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:03:29 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 36..2770 1..2735 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:47:19 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 1..2732 1..2732 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:22:16 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
CG6745-RA 36..2770 1..2735 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:35 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8510038..8510203 1..166 100 -> Plus
3L 8510264..8510451 167..354 100 -> Plus
3L 8510513..8510884 355..726 100 -> Plus
3L 8510940..8511042 727..829 100 -> Plus
3L 8511102..8513007 830..2735 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:35 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8510038..8510203 1..166 100 -> Plus
3L 8510264..8510451 167..354 100 -> Plus
3L 8510513..8510884 355..726 100 -> Plus
3L 8510940..8511042 727..829 100 -> Plus
3L 8511102..8513007 830..2735 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:35 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8510038..8510203 1..166 100 -> Plus
3L 8510264..8510451 167..354 100 -> Plus
3L 8510513..8510884 355..726 100 -> Plus
3L 8510940..8511042 727..829 100 -> Plus
3L 8511102..8513007 830..2735 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:03:29 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8503138..8503303 1..166 100 -> Plus
arm_3L 8503364..8503551 167..354 100 -> Plus
arm_3L 8503613..8503984 355..726 100 -> Plus
arm_3L 8504040..8504142 727..829 100 -> Plus
arm_3L 8504202..8506107 830..2735 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:18:33 Download gff for GH24787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8503613..8503984 355..726 100 -> Plus
3L 8504040..8504142 727..829 100 -> Plus
3L 8504202..8506107 830..2735 100   Plus
3L 8503138..8503303 1..166 100 -> Plus
3L 8503364..8503551 167..354 100 -> Plus

GH24787.pep Sequence

Translation from 47 to 2251

> GH24787.pep
MGKDRGRGRRNNHSGPYNKSNWRGQKKDRPQNNGGGQRNSAPQQKSTLLE
TQVGITEFTNPEAPGFTGILKSRFSDFHVNEIDSNGKVLELNDLSVPKVA
IVAVAENELDNWRKELEAVIGPEVWQDIANLAKAKNDPAIEQKVEIDVTT
LDKEQRTQVHQMIKQLYKGKLLSTTIGQQQAKPKVQEEASLENKDAAEGE
TSTQKDSQVPAEEKKTIKVFKPKPGRGDKRWSFPADYVTFLVHKTNLVTS
DVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQ
RNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEIEQALQSLKER
GFINYYGLQRFGNSASVPTYEVGVALLKHDYKLACELILKPRDSDVEFLR
PIREEWWKNRDSAAAAAQIYGEKFIEKKLLDGLARFGESDYSSALRQIPR
NMLMLYPHAYQSLIFNRIASRRIKEFGLKLIPGDLVYVEQDQSEASEEQA
QQGEALEEQKEEEPNDEPLEVPEGDEAIEEESIFKRKVRPLTAEDIASGK
YKLCDVVLPLPGHDITYPSNECGAWYEEMLAEVGLSSDQLKHKEKTYALA
GAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAEAN
YMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQLEKQAMAKEDNEKKA
VGTQEEQMEVVKEVADEDGQETEQAETQGAEEAV*

GH24787.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:44:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24327-PA 722 GF24327-PA 1..672 1..691 2639 72.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14316-PA 734 GG14316-PA 1..734 1..734 3559 90.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15262-PA 711 GH15262-PA 1..704 1..733 2459 64.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6745-PA 734 CG6745-PA 1..734 1..734 3758 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11971-PA 685 GI11971-PA 15..668 11..694 2397 67.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15502-PA 915 GL15502-PA 1..248 1..260 927 66.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19828-PA 721 GA19828-PA 1..719 1..731 2734 71.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25058-PA 733 GM25058-PA 1..733 1..734 3776 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14097-PA 732 GD14097-PA 1..732 1..734 3764 96.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12196-PA 686 GJ12196-PA 1..669 1..694 2488 68.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20352-PA 733 GK20352-PA 1..666 1..697 2517 69 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20745-PA 725 GE20745-PA 1..725 1..734 3502 91.6 Plus

GH24787.hyp Sequence

Translation from 47 to 2251

> GH24787.hyp
MGKDRGRGRRNNHSGPYNKSNWRGQKKDRPQNNGGGQRNSAPQQKSTLLE
TQVGITEFTNPEAPGFTGILKSRFSDFHVNEIDSNGKVLELNDLSVPKVA
IVAVAENELDNWRKELEAVIGPEVWQDIANLAKAKNDPAIEQKVEIDVTT
LDKEQRTQVHQMIKQLYKGKLLSTTIGQQQAKPKVQEEASLENKDAAEGE
TSTQKDSQVPAEEKKTIKVFKPKPGRGDKRWSFPADYVTFLVHKTNLVTS
DVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQ
RNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEIEQALQSLKER
GFINYYGLQRFGNSASVPTYEVGVALLKHDYKLACELILKPRDSDVEFLR
PIREEWWKNRDSAAAAAQIYGEKFIEKKLLDGLARFGESDYSSALRQIPR
NMLMLYPHAYQSLIFNRIASRRIKEFGLKLIPGDLVYVEQDQSEASEEQA
QQGEALEEQKEEEPNDEPLEVPEGDEAIEEESIFKRKVRPLTAEDIASGK
YKLCDVVLPLPGHDITYPSNECGAWYEEMLAEVGLSSDQLKHKEKTYALA
GAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAEAN
YMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQLEKQAMAKEDNEKKA
VGTQEEQMEVVKEVADEDGQETEQAETQGAEEAV*

GH24787.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG6745-PA 734 CG6745-PA 1..734 1..734 3758 100 Plus