BDGP Sequence Production Resources |
Search the DGRC for GH24859
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 248 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16719-RA |
Protein status: | GH24859.pep: gold |
Preliminary Size: | 1216 |
Sequenced Size: | 1124 |
Gene | Date | Evidence |
---|---|---|
CG16719 | 2001-01-01 | Release 2 assignment |
CG16719 | 2002-05-16 | Blastp of sequenced clone |
CG16719 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16719 | 2008-04-29 | Release 5.5 accounting |
CG16719 | 2008-08-15 | Release 5.9 accounting |
CG16719 | 2008-12-18 | 5.12 accounting |
1124 bp (1124 high quality bases) assembled on 2002-05-16
GenBank Submission: AY119541
> GH24859.complete CTAGACTTGCCAAAATAAATTTACAACAGAAATTAAAAAGCAGGTAAAAT CCGAAAACCCCAAATCACCCCTTGCTAAGTATGGAGAACGAACAGCAGAA TGACCTGAACCAGTGGCTAAAGGAGCAGCGCATTATCCTGGATCTGAAAG CTCGTCGTTCATTCTCCGATGTCTTGCCGGTGGCAAAGATTGTCAAGCGC AGTCATCCTCGTCTGGTGGATCTGCACAACTATACGCCCAAGAGCAGCGT GGCCCTGAAACTCCAGAGCTGGCAGACCTTCAATCAGAAGGTACTGAAGA AATTGGGCATCAATTTGACACGTTCGGAGCTGGAGCAGCTGGCGTCAGCA GCGCCAGGAGCCATAGAATCACTGTTCCATGAACTAATCGCGGTGACCAA GTGCGCTAGTCCCAGACCAAGACCCCGTCTGAGTGTATCGCCAACGAGCT CCCAAAAGAGCGTGGTGATTAAAAAGTTGGCTAACAAGAATTCTGTGGTA CGCACTCTCAACCGATCCCTCACCCAAGTGATTGAGCGCTCCTGCTCGAT CGATAGTCAACCCCAGGTGCTGACCATGGACGTGAATGTTGTGGTCAATG GACAGATGAAGAAGGTATCCAAGAAAGTGGTCGAGTACGAACACTATGCC AATGCTATTAGGGAGAGTGCCGAGAAGTCACGCTACATCAATTCCATTGC CGAGAGGGCCAATCACCTGGAGAACACAATTGCCCTCAAGAATGAACGTA TTGATGTGCTACTCCATCAAATGGCCAAACTATCCGTGAGCATTCTATCC ATGCCACACACCCTCAACGGGACCGATGACGACACAGAGCTTCAATCCCG GTCTGACAACGCCGCCGAACCCTGCTATGAATTCGGCACCTTTTAGCCAA CGGATGGATTTGTCGGTTCTCCGAGGATCCGGCGAGATTATAGCTCCTCT TTTGATTCAAACCTGATGTTATTGGATATATTTGTACTGTATATTTTGTA ATTTATTTTAAACCCTTAAATAAGTATTTCTTTGGCCTCACTTTAATAAA CAAAAATTGTTACGTCGTTCAAAAGGAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16719-RA | 1078 | CG16719-RA | 5..1078 | 1..1074 | 5370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9677049..9678124 | 1..1076 | 5275 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9685175..9686254 | 1..1080 | 5400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9678275..9679354 | 1..1080 | 5400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9677049..9678124 | 1..1076 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 1..816 | 81..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 1..816 | 81..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 1..816 | 81..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 1..816 | 81..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 1..816 | 81..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 5..1078 | 1..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 5..1078 | 1..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 5..1080 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 5..1078 | 1..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16719-RA | 5..1080 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9685175..9686250 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9685175..9686250 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9685175..9686250 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9678275..9679350 | 1..1076 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9678275..9679350 | 1..1076 | 100 | Plus |
Translation from 80 to 895
> GH24859.pep MENEQQNDLNQWLKEQRIILDLKARRSFSDVLPVAKIVKRSHPRLVDLHN YTPKSSVALKLQSWQTFNQKVLKKLGINLTRSELEQLASAAPGAIESLFH ELIAVTKCASPRPRPRLSVSPTSSQKSVVIKKLANKNSVVRTLNRSLTQV IERSCSIDSQPQVLTMDVNVVVNGQMKKVSKKVVEYEHYANAIRESAEKS RYINSIAERANHLENTIALKNERIDVLLHQMAKLSVSILSMPHTLNGTDD DTELQSRSDNAAEPCYEFGTF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25154-PA | 288 | GF25154-PA | 10..256 | 1..241 | 684 | 55.6 | Plus |
Dana\GF20696-PA | 231 | GF20696-PA | 9..209 | 1..234 | 313 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15400-PA | 254 | GG15400-PA | 1..251 | 1..251 | 942 | 70.9 | Plus |
Dere\GG19349-PA | 252 | GG19349-PA | 12..208 | 4..233 | 332 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24770-PA | 252 | GH24770-PA | 9..208 | 1..233 | 269 | 32.2 | Plus |
Dgri\GH24769-PA | 204 | GH24769-PA | 17..123 | 5..112 | 234 | 40.7 | Plus |
Dgri\GH16317-PA | 212 | GH16317-PA | 11..114 | 5..107 | 189 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16719-PA | 271 | CG16719-PA | 1..271 | 1..271 | 1356 | 100 | Plus |
CG12395-PA | 254 | CG12395-PA | 9..208 | 1..233 | 338 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21719-PA | 254 | GI21719-PA | 12..209 | 4..234 | 331 | 36.8 | Plus |
Dmoj\GI24799-PA | 231 | GI24799-PA | 8..213 | 1..231 | 284 | 31.6 | Plus |
Dmoj\GI21718-PA | 384 | GI21718-PA | 27..132 | 8..114 | 227 | 39.3 | Plus |
Dmoj\GI13262-PA | 284 | GI13262-PA | 10..269 | 4..241 | 205 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12715-PA | 312 | GL12715-PA | 7..292 | 1..241 | 380 | 36 | Plus |
Dper\GL13136-PA | 243 | GL13136-PA | 30..209 | 23..234 | 314 | 36.8 | Plus |
Dper\GL17959-PA | 148 | GL17959-PA | 7..112 | 1..107 | 249 | 46.7 | Plus |
Dper\GL14829-PA | 132 | GL14829-PA | 15..110 | 9..104 | 245 | 42.7 | Plus |
Dper\GL14832-PA | 141 | GL14832-PA | 7..125 | 1..120 | 229 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14103-PA | 317 | GA14103-PA | 7..292 | 1..241 | 376 | 34.9 | Plus |
Dpse\GA22962-PA | 243 | GA22962-PA | 30..209 | 23..234 | 314 | 36.8 | Plus |
Dpse\GA28350-PA | 157 | GA28350-PA | 7..112 | 1..107 | 249 | 46.7 | Plus |
Dpse\GA26261-PA | 132 | GA26261-PA | 15..110 | 9..104 | 248 | 43.8 | Plus |
Dpse\GA26273-PA | 132 | GA26273-PA | 7..125 | 1..120 | 232 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25176-PA | 271 | GM25176-PA | 1..271 | 1..271 | 1262 | 87.5 | Plus |
Dsec\GM12982-PA | 254 | GM12982-PA | 12..208 | 4..233 | 335 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14206-PA | 211 | GD14206-PA | 1..211 | 61..271 | 954 | 85.3 | Plus |
Dsim\GD15765-PA | 254 | GD15765-PA | 12..208 | 4..233 | 335 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15586-PA | 254 | GJ15586-PA | 9..208 | 1..233 | 323 | 35.2 | Plus |
Dvir\GJ19072-PA | 225 | GJ19072-PA | 15..220 | 9..235 | 290 | 33.5 | Plus |
Dvir\GJ12032-PA | 259 | GJ12032-PA | 10..248 | 4..251 | 266 | 32.5 | Plus |
Dvir\GJ15326-PA | 267 | GJ15326-PA | 10..218 | 4..241 | 264 | 33.6 | Plus |
Dvir\GJ15585-PA | 336 | GJ15585-PA | 17..125 | 5..114 | 247 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15552-PA | 279 | GK15552-PA | 10..242 | 4..241 | 483 | 42.5 | Plus |
Dwil\GK16628-PA | 245 | GK16628-PA | 8..232 | 1..234 | 381 | 37.4 | Plus |
Dwil\GK20112-PA | 247 | GK20112-PA | 12..208 | 4..233 | 346 | 35.7 | Plus |
Dwil\GK25770-PA | 227 | GK25770-PA | 16..222 | 8..222 | 284 | 34.4 | Plus |
Dwil\GK20111-PA | 348 | GK20111-PA | 14..111 | 5..103 | 245 | 45.5 | Plus |
Translation from 80 to 895
> GH24859.hyp MENEQQNDLNQWLKEQRIILDLKARRSFSDVLPVAKIVKRSHPRLVDLHN YTPKSSVALKLQSWQTFNQKVLKKLGINLTRSELEQLASAAPGAIESLFH ELIAVTKCASPRPRPRLSVSPTSSQKSVVIKKLANKNSVVRTLNRSLTQV IERSCSIDSQPQVLTMDVNVVVNGQMKKVSKKVVEYEHYANAIRESAEKS RYINSIAERANHLENTIALKNERIDVLLHQMAKLSVSILSMPHTLNGTDD DTELQSRSDNAAEPCYEFGTF*