BDGP Sequence Production Resources |
Search the DGRC for GH24869
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 248 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2540-RA |
Protein status: | GH24869.pep: gold |
Preliminary Size: | 1324 |
Sequenced Size: | 1221 |
Gene | Date | Evidence |
---|---|---|
CG2540 | 2001-01-01 | Release 2 assignment |
CG2540 | 2002-05-15 | Blastp of sequenced clone |
CG2540 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2540 | 2008-04-29 | Release 5.5 accounting |
CG2540 | 2008-08-15 | Release 5.9 accounting |
CG2540 | 2008-12-18 | 5.12 accounting |
1221 bp (1221 high quality bases) assembled on 2002-05-15
GenBank Submission: AY119542
> GH24869.complete AGGAAATTGAAAATTTTCACAATTTTTTGGCTAACGAAGCACCGGTGATG TTGGACTTCCTGACGGAGCTGCGAAGCAGTGGTTCTAGGGCGGATCAGCT GCCCGGCAACATATACACCGAGTTCTTCGCGAACGTTATCGAGGAGCCCA GGGAACATGGATGCAAGTCAGCGGATCAGGATTTTACACAAGGATTCTCC ATGCTACGCACTTTCGATACCGAAAATAGCAATCAATTGGAGCCGCCGGC GGCCACGGATGCGGATGTCTGGATCTTTGGCTATGGGTCGTTGGTATGGA AGACGGACTTCCCGTACATAGACCGACGACGCGGCTTCGTTTGGGGATTC AAGCGTCGCTTCTACCAGCACAGCATCGATCACCGGGGTATTCCCGAACG TCCTGGTCGCGTGGTCACCCTGCTGCCAGGCGATCCCGCCCAGGATCGTG TCTATGGCGTCGCCTATCGCATAGCTGCTAGTCAAAAGGGTGCTGTGTTG GACCATCTGGATTACCGGGAGAAGAACGGGTATGAGCGCTGCAGCTTGGA GTTCCACGAGTATCCGACTGACGGTGCAGAACCCATCCAAGTGATCATGT ACGTGGCCACGCAGGCGAACGATTCCTATGCTGGTGATGTGTGGCAAGTT CCCTGTATTGCGAGGCAAATCTTCAGCTCGGCCGGTCCCAGTGGCCCCAA TCGCGAATACCTATTCAACCTGGCCGCCGCCATGGATCAGCTCTTTCCGG GAGCTGTAGACGAGCATCTCGAAGAACTGGTTGCTTGCGTTAAGCGTTAC ATTGTCGAGGATGAGCCCCAGTTAATACGCCATGCGCTGTTGCATGAGAT TTCCGGTATTCTGGAGGAGGAACAGCTAGCGGAGCAGGCACACCAGCTGG AGAAGCTTTTGGAGCGATGTCAGAAACCTGGCGGCCGCGAGTGGTTGATC TACGCTGCACTGCAAGCTAAAAACAAGTCGTGACACCACAACATTTTGCA ATAGAAGACTACTGTTTATTGTAAATACCAAGAAGCTTGGGATATTTCTT TTTAGATGCACCATTCCAAATAGACCAATTGCAACGACGTGTTATAGAGG CTTCTGACGAATCACAATTACGATTGTGATTTCCTGTCATGAACATTATT ATTTATTCATTATTATATATGAAAACATATTTTAAATATAAATTTAAAAC AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2540-RA | 1210 | CG2540-RA | 3..1205 | 1..1203 | 6015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12520868..12522067 | 1..1200 | 5925 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12629912..12631114 | 1..1203 | 6015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12638010..12639212 | 1..1203 | 6015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 61..97 | 1132..1096 | 113 | 78.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12520868..12522010 | 1..1143 | 99 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 1..936 | 48..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 1..936 | 48..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 1..936 | 48..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 1..936 | 48..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 1..936 | 48..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 3..1202 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 3..1202 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 35..1234 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 3..1202 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2540-RA | 35..1234 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12629912..12631111 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12629912..12631111 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12629912..12631111 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12523945..12525144 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12638010..12639209 | 1..1200 | 100 | Plus |
Translation from 2 to 982
> GH24869.hyp EIENFHNFLANEAPVMLDFLTELRSSGSRADQLPGNIYTEFFANVIEEPR EHGCKSADQDFTQGFSMLRTFDTENSNQLEPPAATDADVWIFGYGSLVWK TDFPYIDRRRGFVWGFKRRFYQHSIDHRGIPERPGRVVTLLPGDPAQDRV YGVAYRIAASQKGAVLDHLDYREKNGYERCSLEFHEYPTDGAEPIQVIMY VATQANDSYAGDVWQVPCIARQIFSSAGPSGPNREYLFNLAAAMDQLFPG AVDEHLEELVACVKRYIVEDEPQLIRHALLHEISGILEEEQLAEQAHQLE KLLERCQKPGGREWLIYAALQAKNKS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2540-PA | 311 | CG2540-PA | 1..311 | 16..326 | 1656 | 100 | Plus |
CG10365-PD | 284 | CG10365-PD | 46..228 | 75..259 | 303 | 40.9 | Plus |
CG10365-PA | 284 | CG10365-PA | 46..228 | 75..259 | 303 | 40.9 | Plus |
CG10365-PB | 284 | CG10365-PB | 46..228 | 75..259 | 303 | 40.9 | Plus |
CG10365-PC | 284 | CG10365-PC | 46..228 | 75..259 | 303 | 40.9 | Plus |
Translation from 47 to 982
> GH24869.pep MLDFLTELRSSGSRADQLPGNIYTEFFANVIEEPREHGCKSADQDFTQGF SMLRTFDTENSNQLEPPAATDADVWIFGYGSLVWKTDFPYIDRRRGFVWG FKRRFYQHSIDHRGIPERPGRVVTLLPGDPAQDRVYGVAYRIAASQKGAV LDHLDYREKNGYERCSLEFHEYPTDGAEPIQVIMYVATQANDSYAGDVWQ VPCIARQIFSSAGPSGPNREYLFNLAAAMDQLFPGAVDEHLEELVACVKR YIVEDEPQLIRHALLHEISGILEEEQLAEQAHQLEKLLERCQKPGGREWL IYAALQAKNKS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21381-PA | 318 | GF21381-PA | 11..318 | 1..311 | 1173 | 70.9 | Plus |
Dana\GF16257-PA | 289 | GF16257-PA | 59..233 | 71..244 | 287 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17732-PA | 311 | GG17732-PA | 1..311 | 1..311 | 1547 | 92 | Plus |
Dere\GG11224-PA | 284 | GG11224-PA | 45..224 | 59..240 | 284 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24132-PA | 322 | GH24132-PA | 1..322 | 1..311 | 954 | 59.1 | Plus |
Dgri\GH17461-PA | 297 | GH17461-PA | 66..256 | 70..259 | 306 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2540-PA | 311 | CG2540-PA | 1..311 | 1..311 | 1656 | 100 | Plus |
CG10365-PD | 284 | CG10365-PD | 46..228 | 60..244 | 303 | 40.9 | Plus |
CG10365-PA | 284 | CG10365-PA | 46..228 | 60..244 | 303 | 40.9 | Plus |
CG10365-PB | 284 | CG10365-PB | 46..228 | 60..244 | 303 | 40.9 | Plus |
CG10365-PC | 284 | CG10365-PC | 46..228 | 60..244 | 303 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16388-PA | 322 | GI16388-PA | 24..321 | 20..309 | 984 | 64.8 | Plus |
Dmoj\GI22786-PA | 291 | GI22786-PA | 64..229 | 74..238 | 275 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13138-PA | 322 | GL13138-PA | 1..319 | 1..311 | 1009 | 63.3 | Plus |
Dper\GL13659-PA | 295 | GL13659-PA | 64..239 | 70..244 | 303 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15390-PA | 322 | GA15390-PA | 1..319 | 1..311 | 1009 | 63.3 | Plus |
Dpse\GA10276-PA | 295 | GA10276-PA | 64..239 | 70..244 | 298 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11575-PA | 311 | GM11575-PA | 1..311 | 1..311 | 1559 | 95.8 | Plus |
Dsec\GM26525-PA | 284 | GM26525-PA | 46..224 | 60..240 | 289 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17085-PA | 311 | GD17085-PA | 1..311 | 1..311 | 1623 | 96.8 | Plus |
Dsim\GD21033-PA | 557 | GD21033-PA | 45..136 | 59..158 | 187 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16763-PA | 317 | GJ16763-PA | 1..317 | 1..310 | 987 | 62.4 | Plus |
Dvir\GJ22788-PA | 292 | GJ22788-PA | 61..251 | 70..259 | 304 | 39.9 | Plus |