BDGP Sequence Production Resources |
Search the DGRC for GH24871
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 248 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10750-RA |
Protein status: | GH24871.pep: gold |
Preliminary Size: | 1299 |
Sequenced Size: | 1142 |
Gene | Date | Evidence |
---|---|---|
CG10750 | 2001-01-01 | Release 2 assignment |
CG10750 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10750 | 2003-01-15 | Blastp of sequenced clone |
CG10750 | 2008-04-29 | Release 5.5 accounting |
CG10750 | 2008-08-15 | Release 5.9 accounting |
CG10750 | 2008-12-18 | 5.12 accounting |
1142 bp (1142 high quality bases) assembled on 2003-01-15
GenBank Submission: AY069193
> GH24871.complete TTCTCCAATAGATATTCCCCCAATATATATCAATATATTTGAAAAGATTA TATTTTAATAGGACAAGATGCCGCGACGTAAGCCCACCATTAAGACCGAT GTGATCGGGGATCTGGACCTCAGTCCAGAGGTCGCCATCGATGACTATCG CGTCTCTCGCCAGCAGGACCAATTCTTCGTGAAACCGCCCAATTGGGATT CGGCCGGGGATAACATCGAGATGCTGTACATAGCCAATCTCCGGGAGTAC GACGCCATGAAGCAGGTTCAGATCCAGCTACTCAAAGATGCCAAGCGGCA AGCCGCATTAAATGTGCAGCGCATTCGCAAGATGTACAAGATTCAGGAGC GCCTGCGCAAACGCTTCGTCGAGGTGAATGGATTCATCAAGGATTGTGCG GACAAAAAGCGCAGTGCGGATAAGTCGATTCGCGAGGAGACCGTTCTCCA CGCGGAGGTCACCAAGGAGATAGACGAGTTCAAGACCTCCATTGCCGAAC TGAGCACCTTTCGCAATGCGCTCAAGGCCACGGTGGCTCAGTTTCAGCCA TACGAGAGGGTCCTGGAGGAGGTAGTCGAGGTGTCGGACATCTTCATCTC AACGAAAGACTGCATCGATCGATGTGACGCTCTAATGTTGGCCCAGGTGG AGATCAATAAGCTGGAGAGCCAGAAACTCAACGAGATCGAGGAGATGCGC CTGCGAATGGTTCAGATCACCAGCGAGGCGGCCTTGACCGTTTTGGGCCT CAAAAACGATCTGGCCCGTTTGGATCGTTCCTATGTCAGCTCGCGGGCCA CTTGCCTCAAGTGGGAAAAGATACTAAGTGCCTGCAAGGACACCACGTCG CTCTACAACCTGGACAAGGAGCGCATGTTTGATGGCATTCAAATCCTGTA CCGCATGCTCTGCAAACGTCGAGACATTGTTCCCAGCTACCACAGCTATG AGATCGACAAAATCATGAGCTTCATCATGCGCGAAATAAGTCTTCTTTCA TCGGTCCTCCAGGAATTGGAGTCCAATAAGGGCGATAAAGTCGGCGCTGG ACGTATGTGCTAGTCGGAAAATATAATATTTTTCATGGAGCATAAATAAA TAAATAAATGATTTTAAATCCTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19299141..19299595 | 181..635 | 2275 | 100 | Plus |
chr2L | 23010047 | chr2L | 19299651..19299938 | 636..923 | 1440 | 100 | Plus |
chr2L | 23010047 | chr2L | 19299991..19300193 | 922..1124 | 985 | 99 | Plus |
chr2L | 23010047 | chr2L | 19298899..19299079 | 1..181 | 905 | 100 | Plus |
chr2L | 23010047 | chr2L | 19297589..19297884 | 627..332 | 205 | 71.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19300548..19301002 | 181..635 | 2275 | 100 | Plus |
2L | 23513712 | 2L | 19301058..19301345 | 636..923 | 1440 | 100 | Plus |
2L | 23513712 | 2L | 19301398..19301602 | 922..1126 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 19300306..19300486 | 1..181 | 905 | 100 | Plus |
2L | 23513712 | 2L | 19298996..19299291 | 627..332 | 220 | 71.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19300548..19301002 | 181..635 | 2275 | 100 | Plus |
2L | 23513712 | 2L | 19301058..19301345 | 636..923 | 1440 | 100 | Plus |
2L | 23513712 | 2L | 19301398..19301602 | 922..1126 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 19300306..19300486 | 1..181 | 905 | 100 | Plus |
2L | 23513712 | 2L | 19299214..19299291 | 409..332 | 195 | 83.3 | Minus |
2L | 23513712 | 2L | 19298996..19299144 | 627..479 | 190 | 75.1 | Minus |
2L | 23513712 | 2L | 19298799..19298926 | 766..639 | 175 | 75.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 1164..1211 | 1070..1117 | 132 | 75 | Plus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1048..1096 | 1118..1070 | 128 | 73.5 | Minus |
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 5736..5783 | 1115..1068 | 114 | 70.8 | Minus |
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 4115..4171 | 1054..1113 | 112 | 70 | Plus |
Juan | 4236 | Juan JUAN 4236bp | 4189..4234 | 1067..1111 | 110 | 73.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19299651..19299938 | 636..923 | 100 | -> | Plus |
chr2L | 19299993..19300193 | 924..1124 | 99 | Plus | |
chr2L | 19298899..19299078 | 1..180 | 100 | -> | Plus |
chr2L | 19299141..19299595 | 181..635 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..996 | 68..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..996 | 68..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..996 | 68..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..996 | 68..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..996 | 68..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..1124 | 1..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..1124 | 1..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 52..1175 | 1..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 1..1124 | 1..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10750-RA | 52..1175 | 1..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19300306..19300485 | 1..180 | 100 | -> | Plus |
2L | 19300548..19301002 | 181..635 | 100 | -> | Plus |
2L | 19301058..19301345 | 636..923 | 100 | -> | Plus |
2L | 19301400..19301600 | 924..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19300306..19300485 | 1..180 | 100 | -> | Plus |
2L | 19300548..19301002 | 181..635 | 100 | -> | Plus |
2L | 19301058..19301345 | 636..923 | 100 | -> | Plus |
2L | 19301400..19301600 | 924..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19300306..19300485 | 1..180 | 100 | -> | Plus |
2L | 19300548..19301002 | 181..635 | 100 | -> | Plus |
2L | 19301058..19301345 | 636..923 | 100 | -> | Plus |
2L | 19301400..19301600 | 924..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19300306..19300485 | 1..180 | 100 | -> | Plus |
arm_2L | 19300548..19301002 | 181..635 | 100 | -> | Plus |
arm_2L | 19301058..19301345 | 636..923 | 100 | -> | Plus |
arm_2L | 19301400..19301600 | 924..1124 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19300548..19301002 | 181..635 | 100 | -> | Plus |
2L | 19301058..19301345 | 636..923 | 100 | -> | Plus |
2L | 19301400..19301600 | 924..1124 | 100 | Plus | |
2L | 19300306..19300485 | 1..180 | 100 | -> | Plus |
Translation from 67 to 1062
> GH24871.pep MPRRKPTIKTDVIGDLDLSPEVAIDDYRVSRQQDQFFVKPPNWDSAGDNI EMLYIANLREYDAMKQVQIQLLKDAKRQAALNVQRIRKMYKIQERLRKRF VEVNGFIKDCADKKRSADKSIREETVLHAEVTKEIDEFKTSIAELSTFRN ALKATVAQFQPYERVLEEVVEVSDIFISTKDCIDRCDALMLAQVEINKLE SQKLNEIEEMRLRMVQITSEAALTVLGLKNDLARLDRSYVSSRATCLKWE KILSACKDTTSLYNLDKERMFDGIQILYRMLCKRRDIVPSYHSYEIDKIM SFIMREISLLSSVLQELESNKGDKVGAGRMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14711-PA | 331 | GF14711-PA | 1..331 | 1..331 | 1486 | 83.4 | Plus |
Dana\GF15201-PA | 332 | GF15201-PA | 1..331 | 1..329 | 995 | 56.8 | Plus |
Dana\GF15202-PA | 335 | GF15202-PA | 1..320 | 1..320 | 934 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21168-PA | 331 | GG21168-PA | 1..331 | 1..331 | 1688 | 96.1 | Plus |
Dere\GG21640-PA | 335 | GG21640-PA | 1..320 | 1..320 | 1022 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13442-PA | 337 | GH13442-PA | 1..325 | 1..326 | 1159 | 68.1 | Plus |
Dgri\GH13474-PA | 333 | GH13474-PA | 1..303 | 1..299 | 950 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10750-PA | 331 | CG10750-PA | 1..331 | 1..331 | 1665 | 100 | Plus |
CG10750-PB | 331 | CG10750-PB | 1..331 | 1..331 | 1658 | 99.7 | Plus |
CG17564-PB | 335 | CG17564-PB | 1..320 | 1..320 | 993 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14005-PA | 336 | GI14005-PA | 1..335 | 1..331 | 1154 | 66.9 | Plus |
Dmoj\GI17227-PA | 328 | GI17227-PA | 1..322 | 1..324 | 987 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21195-PA | 329 | GL21195-PA | 1..329 | 1..331 | 1106 | 63.1 | Plus |
Dper\GL21116-PA | 334 | GL21116-PA | 1..334 | 1..331 | 1090 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10542-PA | 329 | GA10542-PA | 1..329 | 1..331 | 1108 | 63.1 | Plus |
Dpse\GA14557-PA | 334 | GA14557-PA | 1..334 | 1..331 | 1087 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17333-PA | 331 | GM17333-PA | 1..331 | 1..331 | 1716 | 97.9 | Plus |
Dsec\GM17018-PA | 335 | GM17018-PA | 1..320 | 1..320 | 1027 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24193-PA | 297 | GD24193-PA | 1..297 | 1..331 | 1491 | 87.3 | Plus |
Dsim\GD21768-PA | 335 | GD21768-PA | 1..320 | 1..320 | 1027 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18249-PA | 336 | GJ18249-PA | 1..335 | 1..331 | 1188 | 68.1 | Plus |
Dvir\GJ17986-PA | 333 | GJ17986-PA | 1..324 | 1..323 | 969 | 55.6 | Plus |
Translation from 67 to 1062
> GH24871.hyp MPRRKPTIKTDVIGDLDLSPEVAIDDYRVSRQQDQFFVKPPNWDSAGDNI EMLYIANLREYDAMKQVQIQLLKDAKRQAALNVQRIRKMYKIQERLRKRF VEVNGFIKDCADKKRSADKSIREETVLHAEVTKEIDEFKTSIAELSTFRN ALKATVAQFQPYERVLEEVVEVSDIFISTKDCIDRCDALMLAQVEINKLE SQKLNEIEEMRLRMVQITSEAALTVLGLKNDLARLDRSYVSSRATCLKWE KILSACKDTTSLYNLDKERMFDGIQILYRMLCKRRDIVPSYHSYEIDKIM SFIMREISLLSSVLQELESNKGDKVGAGRMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10750-PA | 331 | CG10750-PA | 1..331 | 1..331 | 1665 | 100 | Plus |
CG10750-PB | 331 | CG10750-PB | 1..331 | 1..331 | 1658 | 99.7 | Plus |
CG17564-PB | 335 | CG17564-PB | 1..320 | 1..320 | 993 | 60.9 | Plus |