BDGP Sequence Production Resources |
Search the DGRC for GH24918
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 249 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4546-RA |
Protein status: | GH24918.pep: gold |
Preliminary Size: | 1649 |
Sequenced Size: | 1817 |
Gene | Date | Evidence |
---|---|---|
CG4546 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4546 | 2002-05-18 | Blastp of sequenced clone |
CG4546 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4546 | 2008-04-29 | Release 5.5 accounting |
CG4546 | 2008-08-15 | Release 5.9 accounting |
CG4546 | 2008-12-18 | 5.12 accounting |
1817 bp (1817 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118820
> GH24918.complete CGGTGTAAGTAGCCCCGTTTGATCAATACGACTCGGTGGGAGCTCAGTAG AAGGCATCCAGTTACGCTACTGTTCAGACGAATTTCTCCTGTCGTAAATT TGTTTTGGGAAAAAATTACATTTTCTTTTATTTTGTAAGAACGCTGTAAA AATCTGGAAAAAAGACCCAGTGCTCTCGACCTATTTTATTTCGGTACCGC CATCGGGAGCATTCAGTTGCGTTGCTTTTATAAATTTATGTTTACTTGAT TCTCGGTCGGACAAACTGCAAAATGACTTCGATCGAGTCAAAACGCGTCC AATATCGAAAGTATTTGGAACGCGCCGGAGTCATCGATGCCTTAAGCAAG GCTCTGATTAAGCTTTACGAAGAGCAGAATAAGCCGGAGGATGCCATTCG CTTTGTACGCAAGTTTATGTGCGAGAGCTGCCCGGACGATGCCCAGTACG ATGTAATGAAGAACGACCTCGAGGAGGCCAAGACCCACATCTCGAAACTG GAGCAGGAGCTTGAACGGCTACGCGGACAAATCAAAAAGTCACCGGAGGA GTACCAGGAGCTCACTACTGAGGGCTACAAATCGCTCATGGATGATGAGG AGAACGTGAGCTCACTGCTGCGCAAATACCTGACTCCGGAATTGCTGGAG GAGTACATGCTGGTCACCACACCTGCGCCGGTGGATGCCTACCTATACGA TTGCGCCGTCTCCGGATTCGAGCACCACGACGCGCCCGTGGGCATTTTCG CGGCAGATGCTGACAGCTATGACGTGTTCAACAAACTCTTTGATCCGATC ATAAAGGACTATCATGGCCAGATGGACAACGAGAACGATGTGCTGCAGAA AGACCCAGACTTTGGCAACGTGGACGAGATCGAGAACTTGGATCCGGAGC GCAAGTACATTCTGTCCGCACGAATCAGATTGGCTCGCAATATCGAAGGT CTGCCCTTCTTCCCCAAACTGACCGAGAAGCAATTCATAGAGGTGGAGGA GAAGGTGCGTTCGGCCACGGAGACAATGGATGGCGAGCTGATTGGCTCCT ATCTGACAATGGCGGACATCGATGCTGAGACCCAGGCGGAGATGGTCAAG AGACATATATTATTCCAGCGCGGCGATGAGAAGCTGACCACAGCCGGCTG CTATCGTTTCTGGCCAACTGGTCGTGGTGTCTACCACAATCCCGCCGAGA CCTTCTTGATCTGGGTGAATCGCCAGGACCATGTGCACATTATGTCCATG GCACAGTGCGGCGACTTGGGCGATGTTTACAATCGCCTTGTCAACGGTCT AACCGAACTGGAGAAGACGTTGGCCTTTGCCCGGCATCCGCGTTATGGAA ACCTTACGGCTTGCCCCACCAATTTGGGCACCACCCTGCGGGCTTCGGTG CACATCCGTCTGCCGCTACTCAGCAAGGACCCCGATCGTCTACTCGCCCT CGCCGAGGAACAGCAGCTGCAGGTACGCGGCACCGATGGCGGCGAGCTGT CCACCGTGGAAGATGGTGTCATGGACATATCAAATAAGAGGAAGCTTGGT TTCACCGAGTTCGAACTGGTCAAAACTCTGCAGGATGGCGTTGTGACCCT GATTAACGCAGAGGAAGAGCTCGAAATATCCGGACAGGAGGGTTAGAAAC AAATAGCCAATACTTAAAAACCTTGTAAAGCAATTAATATCACTATAAAG TACTCACGAACACTCACAGACGAACACTTAGAGAAACAGGAGAAACGTAT CTTTGGTTAAATAAATTTGTCCCTAGCCACAGACAATCACTCACCTTCCA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11671734..11673000 | 533..1799 | 6290 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 11671072..11671352 | 1..281 | 1405 | 100 | Plus |
chr3R | 27901430 | chr3R | 11671418..11671669 | 281..532 | 1260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15847170..15848437 | 533..1800 | 6340 | 100 | Plus |
3R | 32079331 | 3R | 15846508..15846788 | 1..281 | 1405 | 100 | Plus |
3R | 32079331 | 3R | 15846854..15847105 | 281..532 | 1260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15588001..15589268 | 533..1800 | 6340 | 100 | Plus |
3R | 31820162 | 3R | 15587339..15587619 | 1..281 | 1405 | 100 | Plus |
3R | 31820162 | 3R | 15587685..15587936 | 281..532 | 1260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 8239..8314 | 89..162 | 122 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11671072..11671352 | 1..281 | 100 | -> | Plus |
chr3R | 11671419..11671669 | 282..532 | 100 | -> | Plus |
chr3R | 11671734..11673000 | 533..1799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1374 | 273..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1374 | 273..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1374 | 273..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1374 | 273..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1374 | 273..1646 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1799 | 1..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1799 | 1..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1799 | 1..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1799 | 1..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4546-RA | 1..1773 | 27..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15846508..15846788 | 1..281 | 100 | -> | Plus |
3R | 15846855..15847105 | 282..532 | 100 | -> | Plus |
3R | 15847170..15848436 | 533..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15846508..15846788 | 1..281 | 100 | -> | Plus |
3R | 15846855..15847105 | 282..532 | 100 | -> | Plus |
3R | 15847170..15848436 | 533..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15846508..15846788 | 1..281 | 100 | -> | Plus |
3R | 15846855..15847105 | 282..532 | 100 | -> | Plus |
3R | 15847170..15848436 | 533..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11672230..11672510 | 1..281 | 100 | -> | Plus |
arm_3R | 11672577..11672827 | 282..532 | 100 | -> | Plus |
arm_3R | 11672892..11674158 | 533..1799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15587339..15587619 | 1..281 | 100 | -> | Plus |
3R | 15587686..15587936 | 282..532 | 100 | -> | Plus |
3R | 15588001..15589267 | 533..1799 | 100 | Plus |
Translation from 272 to 1645
> GH24918.pep MTSIESKRVQYRKYLERAGVIDALSKALIKLYEEQNKPEDAIRFVRKFMC ESCPDDAQYDVMKNDLEEAKTHISKLEQELERLRGQIKKSPEEYQELTTE GYKSLMDDEENVSSLLRKYLTPELLEEYMLVTTPAPVDAYLYDCAVSGFE HHDAPVGIFAADADSYDVFNKLFDPIIKDYHGQMDNENDVLQKDPDFGNV DEIENLDPERKYILSARIRLARNIEGLPFFPKLTEKQFIEVEEKVRSATE TMDGELIGSYLTMADIDAETQAEMVKRHILFQRGDEKLTTAGCYRFWPTG RGVYHNPAETFLIWVNRQDHVHIMSMAQCGDLGDVYNRLVNGLTELEKTL AFARHPRYGNLTACPTNLGTTLRASVHIRLPLLSKDPDRLLALAEEQQLQ VRGTDGGELSTVEDGVMDISNKRKLGFTEFELVKTLQDGVVTLINAEEEL EISGQEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18548-PA | 456 | GF18548-PA | 1..456 | 1..457 | 2289 | 92.6 | Plus |
Dana\GF23510-PA | 568 | GF23510-PA | 224..568 | 100..450 | 825 | 46.2 | Plus |
Dana\GF10930-PA | 388 | GF10930-PA | 56..385 | 114..447 | 808 | 45.2 | Plus |
Dana\GF13541-PA | 469 | GF13541-PA | 126..448 | 153..456 | 227 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16959-PA | 457 | GG16959-PA | 1..457 | 1..457 | 2402 | 97.8 | Plus |
Dere\GG15040-PA | 563 | GG15040-PA | 219..563 | 100..450 | 830 | 46.5 | Plus |
Dere\GG14370-PA | 390 | GG14370-PA | 32..384 | 89..447 | 811 | 43.5 | Plus |
Dere\GG22797-PA | 468 | GG22797-PA | 125..447 | 153..456 | 227 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23455-PA | 456 | GH23455-PA | 1..456 | 1..457 | 2096 | 84.9 | Plus |
Dgri\GH15902-PA | 603 | GH15902-PA | 259..603 | 100..450 | 805 | 44.8 | Plus |
Dgri\GH15573-PA | 321 | GH15573-PA | 9..314 | 141..449 | 701 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4546-PA | 457 | CG4546-PA | 1..457 | 1..457 | 2369 | 100 | Plus |
Argk-PG | 356 | CG32031-PG | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PH | 356 | CG32031-PH | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PD | 356 | CG32031-PD | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PE | 375 | CG32031-PE | 31..375 | 100..450 | 806 | 46.5 | Plus |
Argk-PC | 396 | CG32031-PC | 52..396 | 100..450 | 806 | 46.5 | Plus |
Argk-PB | 432 | CG32031-PB | 88..432 | 100..450 | 806 | 46.5 | Plus |
Argk-PA | 562 | CG32031-PA | 218..562 | 100..450 | 806 | 46.5 | Plus |
CG5144-PA | 388 | CG5144-PA | 33..382 | 92..447 | 791 | 44.4 | Plus |
CG30274-PA | 468 | CG30274-PA | 125..447 | 153..456 | 222 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22950-PA | 456 | GI22950-PA | 1..456 | 1..457 | 2064 | 82.7 | Plus |
Dmoj\GI16555-PA | 584 | GI16555-PA | 240..584 | 100..450 | 834 | 46.2 | Plus |
Dmoj\Tes114-PA | 360 | GI16848-PA | 2..353 | 90..447 | 765 | 43.3 | Plus |
Dmoj\GI20329-PA | 467 | GI20329-PA | 124..446 | 153..456 | 228 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22076-PA | 456 | GL22076-PA | 1..456 | 1..457 | 2127 | 86 | Plus |
Dper\GL15080-PA | 564 | GL15080-PA | 220..564 | 100..450 | 819 | 45.6 | Plus |
Dper\GL15035-PA | 384 | GL15035-PA | 38..382 | 100..450 | 803 | 46.2 | Plus |
Dper\GL11384-PA | 467 | GL11384-PA | 124..446 | 153..456 | 223 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18246-PA | 456 | GA18246-PA | 1..456 | 1..457 | 2127 | 86 | Plus |
Dpse\GA16624-PA | 564 | GA16624-PA | 220..564 | 100..450 | 819 | 45.6 | Plus |
Dpse\GA18688-PA | 384 | GA18688-PA | 38..382 | 100..450 | 803 | 46.2 | Plus |
Dpse\GA15743-PA | 467 | GA15743-PA | 124..446 | 153..456 | 223 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24266-PA | 457 | GM24266-PA | 1..457 | 1..457 | 2422 | 98.5 | Plus |
Dsec\GM24893-PA | 559 | GM24893-PA | 215..559 | 100..450 | 835 | 46.7 | Plus |
Dsec\GM25115-PA | 388 | GM25115-PA | 33..382 | 92..447 | 832 | 44.9 | Plus |
Dsec\GM15955-PA | 468 | GM15955-PA | 125..447 | 153..456 | 228 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19054-PA | 457 | GD19054-PA | 1..457 | 1..457 | 2422 | 98.5 | Plus |
Dsim\GD14150-PA | 386 | GD14150-PA | 31..380 | 92..447 | 829 | 44.9 | Plus |
Dsim\GD11708-PA | 468 | GD11708-PA | 125..447 | 153..456 | 230 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23766-PA | 456 | GJ23766-PA | 1..456 | 1..457 | 2125 | 86 | Plus |
Dvir\GJ12807-PA | 573 | GJ12807-PA | 229..573 | 100..450 | 826 | 45.6 | Plus |
Dvir\GJ12598-PA | 380 | GJ12598-PA | 21..373 | 89..447 | 767 | 42.1 | Plus |
Dvir\GJ22053-PA | 467 | GJ22053-PA | 124..446 | 153..456 | 229 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11215-PA | 456 | GK11215-PA | 1..456 | 1..457 | 2165 | 87.3 | Plus |
Dwil\GK23865-PA | 570 | GK23865-PA | 226..570 | 100..450 | 820 | 45.9 | Plus |
Dwil\GK24279-PA | 392 | GK24279-PA | 45..385 | 101..447 | 812 | 46.1 | Plus |
Dwil\GK19395-PA | 467 | GK19395-PA | 124..446 | 153..456 | 221 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24345-PA | 457 | GE24345-PA | 1..457 | 1..457 | 2393 | 97.4 | Plus |
Dyak\GE21263-PA | 565 | GE21263-PA | 221..565 | 100..450 | 829 | 46.5 | Plus |
Dyak\GE20801-PA | 390 | GE20801-PA | 43..384 | 100..447 | 810 | 44.3 | Plus |
Dyak\GE14027-PA | 468 | GE14027-PA | 125..447 | 153..456 | 215 | 24.3 | Plus |
Translation from 272 to 1645
> GH24918.hyp MTSIESKRVQYRKYLERAGVIDALSKALIKLYEEQNKPEDAIRFVRKFMC ESCPDDAQYDVMKNDLEEAKTHISKLEQELERLRGQIKKSPEEYQELTTE GYKSLMDDEENVSSLLRKYLTPELLEEYMLVTTPAPVDAYLYDCAVSGFE HHDAPVGIFAADADSYDVFNKLFDPIIKDYHGQMDNENDVLQKDPDFGNV DEIENLDPERKYILSARIRLARNIEGLPFFPKLTEKQFIEVEEKVRSATE TMDGELIGSYLTMADIDAETQAEMVKRHILFQRGDEKLTTAGCYRFWPTG RGVYHNPAETFLIWVNRQDHVHIMSMAQCGDLGDVYNRLVNGLTELEKTL AFARHPRYGNLTACPTNLGTTLRASVHIRLPLLSKDPDRLLALAEEQQLQ VRGTDGGELSTVEDGVMDISNKRKLGFTEFELVKTLQDGVVTLINAEEEL EISGQEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4546-PA | 457 | CG4546-PA | 1..457 | 1..457 | 2369 | 100 | Plus |
Argk-PG | 356 | CG32031-PG | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PH | 356 | CG32031-PH | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PD | 356 | CG32031-PD | 12..356 | 100..450 | 806 | 46.5 | Plus |
Argk-PE | 375 | CG32031-PE | 31..375 | 100..450 | 806 | 46.5 | Plus |