BDGP Sequence Production Resources |
Search the DGRC for GH25158
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 251 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5399-RA |
Protein status: | GH25158.pep: gold |
Sequenced Size: | 1017 |
Gene | Date | Evidence |
---|---|---|
CG5399 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5399 | 2008-04-29 | Release 5.5 accounting |
CG5399 | 2008-08-15 | Release 5.9 accounting |
CG5399 | 2008-12-18 | 5.12 accounting |
1017 bp (1017 high quality bases) assembled on 2005-05-20
GenBank Submission: BT023404
> GH25158.complete CAGCGAACCGATCGCAGAACCGGAACCTTAAAGCGGAAGATATAGAACTC ATATAGACAGTGACATCATGTGCAATAGTGCGATCATCTGCCTGGCAATC GTGGCCGCCGTGGCCTCCATCTCTCAGGTTTCGGCCCAAGCCCAAACAAC GCCACAATCCTGCGCCCAAGCCACCGGCATTAGTTTTAACCAGACCGCTT TTAGTGGTCAGTGGGTCGAGTTGGCCCGCAATCCCGCCTCAAATGTCTCC TGCATTTCCCTTAACGTGGCTTTCTGGAACAACAACAATTACATGCTGGT CAATGTCAGCCATTCAAGCAATGTCGCCTCCACTTTGGTGGACGTCTATG AAACTGCGAATATCACGCTGGTGGAGAACAACCTCAGCGGATACAATGTC ACCCTGGTGAATGGCCAGAAGCAGGAGTACGTCTTCGTGAAGTTGCTTAG CTTTGTGAACTCCACCTATCTGGTTGGATGCACCTACACCAATGCTACCA ACACATCAACCAGTGCTGGTTTTATTCTGGGTAGGTCCACCTATACTCCG GAAGGCGTAAGGATTGCCAACAATGATGCCTCCGTGTCCTTCAGCAATTT CCAGAACAACACCTACGGCAATGTCACTCAGTTGGATTGCCGTGCCAGTT CCGCCGGACAGACTGTGCCTCTGACCCTGATATCTGGCTTCCTTGCCTTT GCCCTTTTGCTGATCAAGGCCTAAAAATGGAGATGTATCCAATGGCTGCT TTGCCTAGCCACCATAAATGAAAAAAAAAAAACTAACAAAATCCAATCAC TTGCCTAAGTTATTGTGTCATACTCTTTATTTAGTTTTTAGTTGACTTTA AACACCGCACTCTGAAATCGAGGCAAGGCAAAATGATGTCAATAAAAGTA AACCGAAATGGGTGAGGGCCCATAAAAAGCCCCCACTGAAAAGAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11520370..11520806 | 200..636 | 2170 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 11520880..11521186 | 637..943 | 1535 | 100 | Plus |
chr3R | 27901430 | chr3R | 11519888..11520093 | 1..206 | 1000 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15695749..15696185 | 200..636 | 2185 | 100 | Plus |
3R | 32079331 | 3R | 15696259..15696567 | 637..945 | 1545 | 100 | Plus |
3R | 32079331 | 3R | 15695267..15695472 | 1..206 | 1000 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15436580..15437016 | 200..636 | 2185 | 100 | Plus |
3R | 31820162 | 3R | 15437090..15437398 | 637..945 | 1545 | 100 | Plus |
3R | 31820162 | 3R | 15436098..15436303 | 1..206 | 1000 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11520880..11521186 | 637..943 | 100 | Plus | |
chr3R | 11519888..11520086 | 1..199 | 100 | -> | Plus |
chr3R | 11520370..11520806 | 200..636 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..657 | 68..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..657 | 68..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..657 | 68..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..657 | 68..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..657 | 68..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..939 | 4..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..939 | 4..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 27..969 | 1..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 1..939 | 4..942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5399-RA | 27..969 | 1..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15695267..15695465 | 1..199 | 100 | -> | Plus |
3R | 15695749..15696185 | 200..636 | 100 | -> | Plus |
3R | 15696259..15696565 | 637..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15695267..15695465 | 1..199 | 100 | -> | Plus |
3R | 15695749..15696185 | 200..636 | 100 | -> | Plus |
3R | 15696259..15696565 | 637..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15695267..15695465 | 1..199 | 100 | -> | Plus |
3R | 15695749..15696185 | 200..636 | 100 | -> | Plus |
3R | 15696259..15696565 | 637..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11520989..11521187 | 1..199 | 100 | -> | Plus |
arm_3R | 11521471..11521907 | 200..636 | 100 | -> | Plus |
arm_3R | 11521981..11522287 | 637..943 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15436580..15437016 | 200..636 | 100 | -> | Plus |
3R | 15437090..15437396 | 637..943 | 100 | Plus | |
3R | 15436098..15436296 | 1..199 | 100 | -> | Plus |
Translation from 67 to 723
> GH25158.pep MCNSAIICLAIVAAVASISQVSAQAQTTPQSCAQATGISFNQTAFSGQWV ELARNPASNVSCISLNVAFWNNNNYMLVNVSHSSNVASTLVDVYETANIT LVENNLSGYNVTLVNGQKQEYVFVKLLSFVNSTYLVGCTYTNATNTSTSA GFILGRSTYTPEGVRIANNDASVSFSNFQNNTYGNVTQLDCRASSAGQTV PLTLISGFLAFALLLIKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18532-PA | 209 | GF18532-PA | 1..209 | 1..218 | 500 | 49.5 | Plus |
Dana\GF18531-PA | 230 | GF18531-PA | 14..229 | 11..210 | 169 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16940-PA | 213 | GG16940-PA | 1..213 | 1..218 | 875 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18210-PA | 238 | GH18210-PA | 44..237 | 29..218 | 284 | 42.3 | Plus |
Dgri\GH18209-PA | 247 | GH18209-PA | 55..244 | 31..215 | 156 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5399-PB | 218 | CG5399-PB | 1..218 | 1..218 | 1100 | 100 | Plus |
CG5399-PA | 218 | CG5399-PA | 1..218 | 1..218 | 1100 | 100 | Plus |
CG31446-PA | 232 | CG31446-PA | 8..223 | 5..215 | 161 | 30.9 | Plus |
CG31446-PB | 237 | CG31446-PB | 8..228 | 5..215 | 157 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10163-PA | 218 | GI10163-PA | 17..217 | 22..218 | 408 | 45.8 | Plus |
Dmoj\GI10162-PA | 231 | GI10162-PA | 34..228 | 27..218 | 151 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12697-PA | 224 | GL12697-PA | 1..221 | 1..216 | 535 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18852-PA | 224 | GA18852-PA | 1..221 | 1..216 | 533 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24248-PA | 212 | GM24248-PA | 1..212 | 1..218 | 971 | 89.4 | Plus |
Dsec\GM24247-PA | 232 | GM24247-PA | 8..223 | 5..215 | 141 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19037-PA | 214 | GD19037-PA | 1..214 | 1..218 | 973 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10865-PA | 218 | GJ10865-PA | 8..217 | 11..218 | 379 | 48.1 | Plus |
Dvir\GJ10864-PA | 231 | GJ10864-PA | 34..229 | 27..216 | 159 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11408-PA | 222 | GK11408-PA | 26..219 | 31..216 | 304 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24327-PA | 214 | GE24327-PA | 1..214 | 1..218 | 930 | 85.8 | Plus |
Translation from 67 to 723
> GH25158.hyp MCNSAIICLAIVAAVASISQVSAQAQTTPQSCAQATGISFNQTAFSGQWV ELARNPASNVSCISLNVAFWNNNNYMLVNVSHSSNVASTLVDVYETANIT LVENNLSGYNVTLVNGQKQEYVFVKLLSFVNSTYLVGCTYTNATNTSTSA GFILGRSTYTPEGVRIANNDASVSFSNFQNNTYGNVTQLDCRASSAGQTV PLTLISGFLAFALLLIKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5399-PB | 218 | CG5399-PB | 1..218 | 1..218 | 1100 | 100 | Plus |
CG5399-PA | 218 | CG5399-PA | 1..218 | 1..218 | 1100 | 100 | Plus |
CG31446-PA | 232 | CG31446-PA | 8..223 | 5..215 | 161 | 30.9 | Plus |
CG31446-PB | 237 | CG31446-PB | 8..228 | 5..215 | 157 | 30.2 | Plus |