BDGP Sequence Production Resources |
Search the DGRC for GH25257
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 252 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6470-RA |
Protein status: | GH25257.pep: gold |
Preliminary Size: | 1481 |
Sequenced Size: | 1430 |
Gene | Date | Evidence |
---|---|---|
CG6470 | 2001-01-01 | Release 2 assignment |
CG6470 | 2001-07-04 | Blastp of sequenced clone |
CG6470 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6470 | 2008-04-29 | Release 5.5 accounting |
CG6470 | 2008-08-15 | Release 5.9 accounting |
CG6470 | 2008-12-18 | 5.12 accounting |
1430 bp (1430 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051609
> GH25257.complete CTACACATACACAAACACACACGCACACCACACACGAGATGAACAAGCCG CAAAAGCCCATCAAGGTGAAGCGCGCCAAGCGGACCGGATGCTCCAGGAT TCAGCCGCAGGAATTCGTGGAGGCTCAGGTGGAGAACGCGCGCAGGGCGG TGGAGCGCAAGCTGATCTACCTGTCCGAGTCGAACAGAGCCAGTGCATCC ACTCGGGCGGCCAAGCGAAGCACGGCTGGCGCAGGCGGAGGAGCAGGGCG GGAAGGATCGAGCATGGCTGGCCATGCCCATGGTGAGCGTCGCAGGCGCA GCAAGAGGAGTCTGCTACACGCTCCAGCTCAGGAAGAGACCGACGAGGAG GAGAGTTCGCCGCTGGAGAAGACGAACAACTACGATAACAGAAGACGCAG CAGTTGCAATCTATTGCTATCTCCTCGTCGCAATGGCCTCACGCCCCGGA ACTACGAGGCCGAGGCCGAGGCAGCGGAAATGGAAGCCATTATGGCCGCA CAGCAAGCCTCCAACGGAACGACGAAGCCCGATCATGATGAAGGAGATGG CGGGGAGTATCAGGGCGGACCGTTTGGCCGACTGCAGCTGAAGCCGCTGG GCAGCTATGCCACGGACCAGCAGCTGCCCAGCTACTCGTGCGGCGTGTGC GGTGCCAAGTTTCACATCCGATCGCTGCTGGGCGCCCACCGGCACACCCA CGACGATGACTTCAAGGTGCGCTTCCGTGCACGGCGACCGCGGGAGAGCA GAACCACCCTGACCACCGTCCATTTGTGCAAGTACTGCGATCGCTCCTTC GACCTGGAACGCACGCTGCACATCCATCTGCTGAGCTACTGCAAGAAGAT ACCGCCGCAGCAGCGCCGCAAGCTGGCCTTCACGGAACTGGCGCACGAGA AGAAGGCGCCGTTGCCCAACTTTCAGCGGGCGCAGCAGCCGGTTCACCAC CAGGGAAACAGTGCCACCAACCAGCAGGATCAGATGACCCAGCAGGAAAA ACTTCAGAAGATTATCATGCGCGAGTCGGCAGTGCACGAGCGCTGGCGCT AGTCGTCCTCATTACCAATCTTCACCAGAAACTGGATGCAGAACCAACGC TTGCTTCCAAACACCAGAAGAATCCATTGAAACGAAAGGAAAATTGTCAA GTGCAGGGCGTATGCAGCTCAACTGTATTTGATTTGTTTACCAGGATCAT CAAAATTTGTGGAATTGAAGGCAAAATTATTAGAAGTATGAATTGAGCAC AATGACACGATTAGTGGGAGACTCACCTGTTCTGAAGACCGAAACACACA CTGGCGTTGAATAGTCACATTCCACAAACGACGGTCAATTAAAACTAAAT TAAGAGTCCCCAGCACGTTGATGCAAATGTATTGAATATAATTAAATATT TGAACTAAACAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6470-RA | 1660 | CG6470-RA | 240..1653 | 1..1414 | 7070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18401961..18402955 | 412..1412 | 98 | <- | Minus |
chrX | 18403463..18403873 | 1..411 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 1..1014 | 39..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 1..1014 | 39..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 1..1014 | 39..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 1..1014 | 39..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 1..1014 | 39..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 64..1475 | 1..1412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 64..1475 | 1..1412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 64..1475 | 1..1412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 64..1475 | 1..1412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6470-RA | 64..1475 | 1..1412 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18512829..18513829 | 412..1412 | 100 | <- | Minus |
X | 18514337..18514747 | 1..411 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18512829..18513829 | 412..1412 | 100 | <- | Minus |
X | 18514337..18514747 | 1..411 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18512829..18513829 | 412..1412 | 100 | <- | Minus |
X | 18514337..18514747 | 1..411 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18406862..18407862 | 412..1412 | 100 | <- | Minus |
arm_X | 18408370..18408780 | 1..411 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18520927..18521927 | 412..1412 | 100 | <- | Minus |
X | 18522435..18522845 | 1..411 | 100 | Minus |
Translation from 2 to 1051
> GH25257.hyp THTQTHTHTTHEMNKPQKPIKVKRAKRTGCSRIQPQEFVEAQVENARRAV ERKLIYLSESNRASASTRAAKRSTAGAGGGAGREGSSMAGHAHGERRRRS KRSLLHAPAQEETDEEESSPLEKTNNYDNRRRSSCNLLLSPRRNGLTPRN YEAEAEAAEMEAIMAAQQASNGTTKPDHDEGDGGEYQGGPFGRLQLKPLG SYATDQQLPSYSCGVCGAKFHIRSLLGAHRHTHDDDFKVRFRARRPRESR TTLTTVHLCKYCDRSFDLERTLHIHLLSYCKKIPPQQRRKLAFTELAHEK KAPLPNFQRAQQPVHHQGNSATNQQDQMTQQEKLQKIIMRESAVHERWR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6470-PB | 337 | CG6470-PB | 1..337 | 13..349 | 1768 | 100 | Plus |
CG6470-PA | 337 | CG6470-PA | 1..337 | 13..349 | 1768 | 100 | Plus |
CG8478-PE | 571 | CG8478-PE | 204..467 | 22..305 | 228 | 25.9 | Plus |
CG8478-PB | 571 | CG8478-PB | 204..467 | 22..305 | 228 | 25.9 | Plus |
CG8478-PC | 572 | CG8478-PC | 205..468 | 22..305 | 228 | 25.9 | Plus |
Translation from 38 to 1051
> GH25257.pep MNKPQKPIKVKRAKRTGCSRIQPQEFVEAQVENARRAVERKLIYLSESNR ASASTRAAKRSTAGAGGGAGREGSSMAGHAHGERRRRSKRSLLHAPAQEE TDEEESSPLEKTNNYDNRRRSSCNLLLSPRRNGLTPRNYEAEAEAAEMEA IMAAQQASNGTTKPDHDEGDGGEYQGGPFGRLQLKPLGSYATDQQLPSYS CGVCGAKFHIRSLLGAHRHTHDDDFKVRFRARRPRESRTTLTTVHLCKYC DRSFDLERTLHIHLLSYCKKIPPQQRRKLAFTELAHEKKAPLPNFQRAQQ PVHHQGNSATNQQDQMTQQEKLQKIIMRESAVHERWR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22408-PA | 385 | GF22408-PA | 45..385 | 27..337 | 621 | 47.6 | Plus |
Dana\GF23037-PA | 564 | GF23037-PA | 360..461 | 199..295 | 235 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18110-PA | 342 | GG18110-PA | 1..342 | 1..337 | 1133 | 73 | Plus |
Dere\GG17114-PA | 568 | GG17114-PA | 369..492 | 199..322 | 226 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12334-PA | 344 | GH12334-PA | 13..279 | 19..296 | 378 | 38.2 | Plus |
Dgri\GH23582-PA | 332 | GH23582-PA | 7..267 | 27..296 | 370 | 39.1 | Plus |
Dgri\GH17408-PA | 578 | GH17408-PA | 387..473 | 199..296 | 224 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6470-PB | 337 | CG6470-PB | 1..337 | 1..337 | 1768 | 100 | Plus |
CG6470-PA | 337 | CG6470-PA | 1..337 | 1..337 | 1768 | 100 | Plus |
CG8478-PE | 571 | CG8478-PE | 204..467 | 10..293 | 228 | 25.9 | Plus |
CG8478-PB | 571 | CG8478-PB | 204..467 | 10..293 | 228 | 25.9 | Plus |
CG8478-PC | 572 | CG8478-PC | 205..468 | 10..293 | 228 | 25.9 | Plus |
CG8478-PD | 576 | CG8478-PD | 209..472 | 10..293 | 228 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15584-PA | 304 | GI15584-PA | 1..304 | 21..337 | 469 | 38.2 | Plus |
Dmoj\GI22738-PA | 610 | GI22738-PA | 425..510 | 199..295 | 209 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24303-PA | 564 | GL24303-PA | 364..461 | 199..295 | 208 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19619-PA | 281 | GA19619-PA | 42..276 | 25..292 | 516 | 45.4 | Plus |
Dpse\GA21104-PA | 564 | GA21104-PA | 364..461 | 199..295 | 207 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22802-PA | 331 | GM22802-PA | 1..331 | 1..337 | 1409 | 85.2 | Plus |
Dsec\GM23836-PA | 179 | GM23836-PA | 29..103 | 247..322 | 189 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15627-PA | 123 | GD15627-PA | 1..123 | 1..127 | 471 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15188-PA | 325 | GJ15188-PA | 14..272 | 20..303 | 473 | 41.7 | Plus |
Dvir\GJ22740-PA | 540 | GJ22740-PA | 350..463 | 199..325 | 217 | 40.9 | Plus |