BDGP Sequence Production Resources |
Search the DGRC for GH25289
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 252 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG31221-RA |
Protein status: | GH25289.pep: gold |
Sequenced Size: | 1400 |
Gene | Date | Evidence |
---|---|---|
CG31221 | 2002-11-11 | Blastp of sequenced clone |
CG31221 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31221 | 2008-04-29 | Release 5.5 accounting |
CG31221 | 2008-08-15 | Release 5.9 accounting |
CG31221 | 2008-12-18 | 5.12 accounting |
1400 bp (1400 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001440
> GH25289.complete AAAGCTTGCATGTAGTCCCCAAAACCAAGTAGTAAACGATAAGGAAACTA TATAGAACCGATCGATATAGAAATATAGAATCGGGAAGAAGTTGCAGCTA ATTTCTGGTTCGTATAACTCCATTAGAAGGCGATTAGCATATTGAAGGAC GAGCGGAGTAAGCGGCGGGAAACCCGCTGCAGTGGCTGAAGTGCCAACGA TAATTCAATCAAAGGGCTGGAAAAAGTTGCCCGGAAAACTGCTTCTGAGC GAAGTAGGGAAGGAAACTACAAAACTCCATCAAAACACTCGGATAAAGTG GAAAACGTGTGCGTGCGCGTGTGAAAAACTTTTATCATCAGGCCGAGGGT CTTAATTTCCACACTTTATAAGTTCCGCCAGCCAGCGGTATATGTCCTTC CTGGCAATGGACCACCACCATCATCATCATCATCAGCAGCCGCGTCAGCA CCACCTCAGCATGTGGCCATCATTCGCCGTCTGTCTGCTCCTCCTGCAGA CCACCACGACCACCATGGCCATCGATTTGAGTCGTTTGTACGGGCACATG GCCAATCCCATCGTGAAGCGGAGCGAAGCCTGTCATCCGTATGAGCCCTT CAAGTGTCCCGGGGATGGTAATTGCATTTCCATCCAATATTTATGCGATG GTGCACCCGATTGCTCTGACGGATACGATGAGGATATGCGTCTATGTACG GCTGCCAAGCGGCCGCCGGTCGAGGAGACCGCATCCTTCCTCCAGAGCCT GATCGCCTCCCACGGACCCAATTACCTGGAAAAACTTTTCGGCAGCAAGG CACGTGATGCCCTTTCACCTCTCGGCGGAGTCGAGAAGGTCGCCATCGCG TTGAGTGAGTCGCAAACGATTGAGGATTTTGGAGCTGCCCTTCATCTAAT GAGATCGGACCTGGAACACTTGCGCTCGGTTTTCATGGCGGTGGAGAACG GGGATCTGGGCATGCTGAAGTCGCTGGGCATCAAGGACTCGGAGCTGGGC GATGTGAAGTTCTTCTTGGAGAAGCTGGTCAACACCGGCTTCCTCGACTG AGTAGCGCCAGATCCGGCTTCTGGATTTTATTACGCACACGCACAGCCCA TCAATCCTAATTTCTATTCGTATTTGGGCACGCCCTATGATAATTACAAT TATTAAATGCGAATTACACCGGAACACACGTACCTACAATCATCGTCCCC AAACAAAACGTACCCATGAATGCCCCTCCATTTCAGCCAAAAGATATTTT CTCAAACTCTATTTTTGAGTATGATTTTGCTTTCCAAGAACCTTCTTATA CGAGTTTTTTGGTTTAATTATTTTCATTTTCCAAACACTTTTATATAAAA AAAAAAAAACAAAAATCAAGCAACCAAAAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15239710..15240284 | 1..575 | 2875 | 100 | Plus |
chr3R | 27901430 | chr3R | 15280992..15281471 | 902..1382 | 2355 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 15277942..15278141 | 704..903 | 985 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 15264576..15264705 | 575..704 | 650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19415814..19416388 | 1..575 | 2875 | 100 | Plus |
3R | 32079331 | 3R | 19457118..19457605 | 902..1390 | 2395 | 99.8 | Plus |
3R | 32079331 | 3R | 19454066..19454265 | 704..903 | 1000 | 100 | Plus |
3R | 32079331 | 3R | 19440702..19440831 | 575..704 | 650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19156645..19157219 | 1..575 | 2875 | 100 | Plus |
3R | 31820162 | 3R | 19197949..19198436 | 902..1390 | 2405 | 99.7 | Plus |
3R | 31820162 | 3R | 19194897..19195096 | 704..903 | 1000 | 100 | Plus |
3R | 31820162 | 3R | 19181533..19181662 | 575..704 | 650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15239710..15240119 | 1..410 | 100 | == | Plus |
chr3R | 15240172..15240284 | 463..575 | 100 | -> | Plus |
chr3R | 15264577..15264705 | 576..704 | 100 | -> | Plus |
chr3R | 15277943..15278141 | 705..903 | 99 | -> | Plus |
chr3R | 15280994..15281471 | 904..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 1..660 | 392..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 1..660 | 392..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RC | 1..765 | 392..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 1..660 | 392..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RC | 1..765 | 392..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 248..1628 | 1..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 248..1628 | 1..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RA | 258..1638 | 1..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RB | 248..1628 | 1..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31221-RA | 258..1638 | 1..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19415814..19416388 | 1..575 | 100 | -> | Plus |
3R | 19440703..19440831 | 576..704 | 100 | -> | Plus |
3R | 19454067..19454265 | 705..903 | 100 | -> | Plus |
3R | 19457120..19457597 | 904..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19415814..19416388 | 1..575 | 100 | -> | Plus |
3R | 19440703..19440831 | 576..704 | 100 | -> | Plus |
3R | 19454067..19454265 | 705..903 | 100 | -> | Plus |
3R | 19457120..19457597 | 904..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19415814..19416388 | 1..575 | 100 | -> | Plus |
3R | 19440703..19440831 | 576..704 | 100 | -> | Plus |
3R | 19454067..19454265 | 705..903 | 100 | -> | Plus |
3R | 19457120..19457597 | 904..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15241536..15242110 | 1..575 | 100 | -> | Plus |
arm_3R | 15266425..15266553 | 576..704 | 100 | -> | Plus |
arm_3R | 15279789..15279987 | 705..903 | 100 | -> | Plus |
arm_3R | 15282842..15283319 | 904..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19156645..19157219 | 1..575 | 100 | -> | Plus |
3R | 19181534..19181662 | 576..704 | 100 | -> | Plus |
3R | 19194898..19195096 | 705..903 | 100 | -> | Plus |
3R | 19197951..19198428 | 904..1382 | 99 | Plus |
Translation from 391 to 1050
> GH25289.hyp MSFLAMDHHHHHHHQQPRQHHLSMWPSFAVCLLLLQTTTTTMAIDLSRLY GHMANPIVKRSEACHPYEPFKCPGDGNCISIQYLCDGAPDCSDGYDEDMR LCTAAKRPPVEETASFLQSLIASHGPNYLEKLFGSKARDALSPLGGVEKV AIALSESQTIEDFGAALHLMRSDLEHLRSVFMAVENGDLGMLKSLGIKDS ELGDVKFFLEKLVNTGFLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31221-PB | 219 | CG31221-PB | 1..219 | 1..219 | 1168 | 100 | Plus |
CG31221-PA | 219 | CG31221-PA | 1..219 | 1..219 | 1168 | 100 | Plus |
CG31221-PC | 254 | CG31221-PC | 1..219 | 1..219 | 1168 | 100 | Plus |
Translation from 391 to 1050
> GH25289.pep MSFLAMDHHHHHHHQQPRQHHLSMWPSFAVCLLLLQTTTTTMAIDLSRLY GHMANPIVKRSEACHPYEPFKCPGDGNCISIQYLCDGAPDCSDGYDEDMR LCTAAKRPPVEETASFLQSLIASHGPNYLEKLFGSKARDALSPLGGVEKV AIALSESQTIEDFGAALHLMRSDLEHLRSVFMAVENGDLGMLKSLGIKDS ELGDVKFFLEKLVNTGFLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16553-PA | 211 | GF16553-PA | 3..211 | 4..219 | 1038 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23328-PA | 223 | GG23328-PA | 1..223 | 1..219 | 1131 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22296-PA | 203 | GH22296-PA | 10..203 | 24..219 | 968 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31221-PB | 219 | CG31221-PB | 1..219 | 1..219 | 1168 | 100 | Plus |
CG31221-PA | 219 | CG31221-PA | 1..219 | 1..219 | 1168 | 100 | Plus |
CG31221-PC | 254 | CG31221-PC | 1..219 | 1..219 | 1168 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23103-PA | 208 | GI23103-PA | 16..208 | 25..219 | 949 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12652-PA | 207 | GL12652-PA | 1..207 | 6..219 | 979 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16102-PA | 207 | GA16102-PA | 1..207 | 6..219 | 979 | 91.1 | Plus |
Dpse\GA16102-PB | 193 | GA16102-PB | 35..193 | 61..219 | 815 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26843-PA | 221 | GM26843-PA | 1..221 | 1..219 | 1149 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19292-PA | 223 | GD19292-PA | 1..223 | 1..219 | 1147 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22724-PA | 208 | GJ22724-PA | 15..208 | 24..219 | 976 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13815-PA | 226 | GK13815-PA | 31..226 | 22..219 | 887 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25607-PA | 221 | GE25607-PA | 1..221 | 1..219 | 1116 | 96.4 | Plus |