BDGP Sequence Production Resources |
Search the DGRC for GH25366
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 253 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | betaggt-II-RA |
Protein status: | GH25366.pep: gold |
Preliminary Size: | 1599 |
Sequenced Size: | 1415 |
Gene | Date | Evidence |
---|---|---|
CG18627 | 2001-01-01 | Release 2 assignment |
CG18627 | 2001-10-10 | Blastp of sequenced clone |
CG18627 | 2003-01-01 | Sim4 clustering to Release 3 |
betaggt-II | 2008-04-29 | Release 5.5 accounting |
betaggt-II | 2008-08-15 | Release 5.9 accounting |
betaggt-II | 2008-12-18 | 5.12 accounting |
1415 bp (1415 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060784
> GH25366.complete TTATTTGTTTGCTCGCAGCACTATTCCTGCCAATTAATAGAGTTAATCAA GCGAAACAGCGCGCCGAAGAGGATCTGCCAGCCACCCGATACTCATTCAA TTGAGCCCAATCAGCGATGGACTTCACGACCTTCGTAAAGCCCTCAAATG GCGGTGGCGACAGCGGCGGTGGTGGTGATGCGGATGGCGGCGGCCAGAAG CTGCAGTTCTGGAAGCATGTGGAGTACATCGAGAACCATGGGAAGCAGGA GGACGACTACGAGTACTGCATGACCGAGTTTCTGCGCATGTCGGGCATCT ATTGGGGCACCACTGCCCTGGACATTATGGGCCAGCTGGAGCGATTGGAG CGCAAGTCCATCATCGAGTTTGTGAAGCGTTGTCAGTGTCCGAACACGGG CGGATTCGCACCCTGCGAGGGCCACGATCCCCACCTGCTGTACACCCTGT CGGCCATCCAGATCCTCTGCACCTACGACGCCCTCGAGGAGATCGACCGC GAGGCGGTGGTCCGATTCGTGGTCGGACTGCAGCAGCCCGACGGCAGCTT CTTTGGCGACAAGTGGGGCGAGGTGGACACCAGGTTCAGCTTCTGTGCGG TGGCCTCCCTAACGCTGCTCGGCCGCATGGAGCAGACCATCGACGTGGAG AAGGCGGTCAAGTTCGTGCTCTCGTGCTGCAATCAGACGGACGGTGGATT CGGTTCCAAGCCGGGCGCCGAGTCGCATGCGGGGCTCATCTACTGCTGCG TCGGCTTCTTCTCGCTGACCCATCGCCTGCATCTGCTCGACGTGGACAAA CTGGGCTGGTGGCTCTGCGAGCGGCAGCTGCCCTCCGGTGGGCTAAATGG ACGGCCCGAGAAGCTGCCGGATGTATGCTATTCGTGGTGGGTGCTCGCCT CGCTCACCATCATGGGCCGCCTGCACTGGATCAGCTCGGAGAAGCTGCAG CAGTTCATACTGTCGTGCCAGGACACGGAGACCGGTGGCTTCTCGGACAG AACTGGCAACATGCCGGACATATTCCACACGCTGTTCGGCATCGGCGGAC TCTCGCTACTGGGACATTCCGGCCTGAAGGCCATCAACCCAACGCTCTGC ATGCCGCAGTACATCATCGACCGGCTGGGCATCAAGCCGCAACTATTGCC GAGGCCATGAGGGGATTCATCGATTCCACATGCAGCCAGTGCGTAGCCAA TGTGTAGTGCAGCAGACCTCTGACGTATTCCCACGCTAGCGTTTCTTAGT TTTATTTGTAAAAAGACCAAAATTCCATAGCAGGAACACCCTTTCTTTAC TCATTTTCTTCGTTATGCATTTACCCCTCTATTATTATTAAATATAGAAT ATTTTGTATAGCGAACGAAAATCAGCAATAAACAAATATTTTACTTTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
betaggt-II-RA | 1496 | betaggt-II-RA | 89..1487 | 1..1399 | 6995 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2878804..2879529 | 1..732 | 92 | -> | Plus |
chr2L | 2879694..2880358 | 733..1397 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 1..1044 | 117..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 1..1044 | 117..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 1..1044 | 117..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 1..1044 | 117..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 1..1044 | 117..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 25..1421 | 1..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 25..1421 | 1..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 37..1433 | 1..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 25..1421 | 1..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaggt-II-RA | 37..1433 | 1..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2879148..2879879 | 1..732 | 100 | -> | Plus |
2L | 2880044..2880708 | 733..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2879148..2879879 | 1..732 | 100 | -> | Plus |
2L | 2880044..2880708 | 733..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2879148..2879879 | 1..732 | 100 | -> | Plus |
2L | 2880044..2880708 | 733..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2879148..2879879 | 1..732 | 100 | -> | Plus |
arm_2L | 2880044..2880708 | 733..1397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2879148..2879879 | 1..732 | 100 | -> | Plus |
2L | 2880044..2880708 | 733..1397 | 100 | Plus |
Translation from 116 to 1159
> GH25366.hyp MDFTTFVKPSNGGGDSGGGGDADGGGQKLQFWKHVEYIENHGKQEDDYEY CMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGFAPC EGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKW GEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPG AESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKL PDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMP DIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDRLGIKPQLLPRP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
betaggt-II-PA | 347 | CG18627-PA | 1..347 | 1..347 | 1899 | 100 | Plus |
CG17565-PA | 419 | CG17565-PA | 91..363 | 61..318 | 345 | 31.4 | Plus |
betaggt-I-PB | 376 | CG3469-PB | 37..336 | 57..329 | 335 | 32.1 | Plus |
betaggt-I-PA | 395 | CG3469-PA | 37..336 | 57..329 | 335 | 32.1 | Plus |
Translation from 116 to 1159
> GH25366.pep MDFTTFVKPSNGGGDSGGGGDADGGGQKLQFWKHVEYIENHGKQEDDYEY CMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGFAPC EGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKW GEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPG AESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKL PDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMP DIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDRLGIKPQLLPRP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14990-PA | 341 | GF14990-PA | 1..340 | 1..346 | 1685 | 91 | Plus |
Dana\GF23591-PA | 404 | GF23591-PA | 43..342 | 57..329 | 334 | 31.4 | Plus |
Dana\GF18495-PA | 415 | GF18495-PA | 92..364 | 61..318 | 300 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24898-PA | 345 | GG24898-PA | 1..345 | 1..347 | 1790 | 97.4 | Plus |
Dere\GG25031-PA | 402 | GG25031-PA | 43..342 | 57..329 | 348 | 31.9 | Plus |
Dere\GG17001-PA | 419 | GG17001-PA | 91..363 | 61..318 | 314 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10686-PA | 342 | GH10686-PA | 1..342 | 1..346 | 1652 | 89.3 | Plus |
Dgri\GH13329-PA | 388 | GH13329-PA | 44..341 | 57..327 | 330 | 30.8 | Plus |
Dgri\GH19342-PA | 415 | GH19342-PA | 56..363 | 25..318 | 323 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
betaggt-II-PA | 347 | CG18627-PA | 1..347 | 1..347 | 1899 | 100 | Plus |
CG17565-PA | 419 | CG17565-PA | 91..363 | 61..318 | 345 | 31.4 | Plus |
betaggt-I-PB | 376 | CG3469-PB | 37..336 | 57..329 | 335 | 32.1 | Plus |
betaggt-I-PA | 395 | CG3469-PA | 37..336 | 57..329 | 335 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11182-PA | 341 | GI11182-PA | 1..338 | 1..344 | 1639 | 89 | Plus |
Dmoj\GI17803-PA | 389 | GI17803-PA | 37..334 | 57..327 | 335 | 30.1 | Plus |
Dmoj\GI22551-PA | 414 | GI22551-PA | 91..381 | 61..345 | 310 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26294-PA | 342 | GL26294-PA | 1..342 | 1..347 | 1672 | 89.3 | Plus |
Dper\GL18644-PA | 404 | GL18644-PA | 44..343 | 57..329 | 338 | 31.6 | Plus |
Dper\GL21606-PA | 424 | GL21606-PA | 91..363 | 61..318 | 318 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15021-PA | 342 | GA15021-PA | 1..342 | 1..347 | 1672 | 89.3 | Plus |
Dpse\GA17468-PA | 405 | GA17468-PA | 44..343 | 57..329 | 338 | 31.6 | Plus |
Dpse\GA14558-PA | 424 | GA14558-PA | 91..363 | 61..318 | 317 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18378-PA | 346 | GM18378-PA | 1..346 | 1..347 | 1814 | 98.6 | Plus |
Dsec\GM15154-PA | 425 | GM15154-PA | 91..363 | 61..318 | 297 | 29.9 | Plus |
Dsec\GM18504-PA | 261 | GM18504-PA | 43..261 | 57..248 | 168 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23193-PA | 212 | GD23193-PA | 71..212 | 206..347 | 753 | 99.3 | Plus |
Dsim\GD23193-PA | 212 | GD23193-PA | 1..210 | 1..251 | 333 | 42.6 | Plus |
Dsim\GD19096-PA | 419 | GD19096-PA | 91..363 | 61..318 | 297 | 29.9 | Plus |
Dsim\GD23309-PA | 326 | GD23309-PA | 37..312 | 57..305 | 284 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18324-PA | 345 | GJ18324-PA | 1..342 | 1..344 | 1640 | 87.8 | Plus |
Dvir\GJ17628-PA | 396 | GJ17628-PA | 44..349 | 57..333 | 342 | 31 | Plus |
Dvir\GJ23741-PA | 417 | GJ23741-PA | 91..371 | 61..327 | 310 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24285-PA | 347 | GK24285-PA | 1..347 | 1..347 | 1561 | 87.6 | Plus |
Dwil\GK24474-PA | 392 | GK24474-PA | 43..342 | 57..329 | 331 | 30.4 | Plus |
Dwil\GK13218-PA | 419 | GK13218-PA | 91..367 | 61..327 | 322 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18191-PA | 342 | GE18191-PA | 1..342 | 1..347 | 1776 | 97.1 | Plus |
Dyak\GE11266-PA | 402 | GE11266-PA | 43..342 | 57..329 | 352 | 32.8 | Plus |
Dyak\GE24394-PA | 419 | GE24394-PA | 91..363 | 61..318 | 312 | 31.8 | Plus |