![]() | BDGP Sequence Production Resources |
Search the DGRC for GH25417
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 254 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42508-RA |
Protein status: | GH25417.pep: gold |
Sequenced Size: | 954 |
Gene | Date | Evidence |
---|---|---|
CG4468 | 2010-12-02 | CDS novel splice |
954 bp assembled on 2011-01-12
GenBank Submission: BT125925.1
> GH25417.complete GCGAGGAAGCACCAGGCGGAGAGCACTTCCAGGACCAACTCCAATCAAAT GCAGTGCTGTGCAGGCTGACCGACCAACTGCTGCTATCTGGATGCAATGA AGCCGAAGAAATCGGCCTTTGCCAATTCATCCACGGGATACGGCAGGAAC AAGCACGGTAAAGGACACTCTGGCAAGGATAAAGTCGAGGGTGGTGGTAA GGGCAAGAGCCGAGACGAGAAGGATAAGCATAAGCATGAGCAGAAGGTGG ACGAGAAGGATGACAAGGATCTAAATTCCGGCTTCGGCGACTATCTTCGC ACTCCGGAGGGTCTCATTTGAAATGATGAAACTCTTTGTCTTCGCCAATA CCATAATGCTAATTGTCACCATGGCCTGGCCGCACATCAAGGAGCAATTC TACATGGTTAATCAATGGCTTGAAAGCTTCCGCGAGGAGCATCAGCAGTA GAAACCAAAGGATCTATCGAACAAATAAGTAAATCAAGTGGAAGCATACA ATATGGTCGGTCCATTCATGCAGGGCCTATTCTTGATTGGCATCATCTAC TGGTATTCCAAGGGGATGATGTCCATGATCAACGACTACTACAGAAGTGA GTTCCAGCGAAAGTTGCAGACGGAACCAGCAAAGACGAGGGCAGAGACAC CCATCAATGTGGACAACTTTATGGATTATGTTAGGGAGCTGGACACTCCG GACGAGGTGGCTAGAATTCCGGCGGAAGGAACTGAATCTCCGCCCATGGG AAACACCTATTGCCACATCCTTCGACGATTCTTGGAGATTACCGGCACTC TACCACCATTCGATGTTTGCCTAGTTACGAGCAACATAAGATAGCCCATC CTATAATTAATTATATATGGTATCAATTATACTTAGTGTGTTTTATATGA GTTTCGTAGAATAAAATATCTTACTAACCGTATTGCAAAAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15738306..15738926 | 315..936 | 98 | <- | Minus |
chr3R | 15738991..15739304 | 1..314 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42508-RA | 1..342 | 503..844 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42508-RA | 1..342 | 503..844 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42508-RA | 1..342 | 503..844 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4468-RA | 20..946 | 1..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Xport-RB | 1..936 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42508-RB | 23..958 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19914391..19915012 | 315..936 | 100 | <- | Minus |
3R | 19915077..19915390 | 1..314 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19914391..19915012 | 315..936 | 100 | <- | Minus |
3R | 19915077..19915390 | 1..314 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19914391..19915012 | 315..936 | 100 | <- | Minus |
3R | 19915077..19915390 | 1..314 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15740113..15740734 | 315..936 | 100 | <- | Minus |
arm_3R | 15740799..15741112 | 1..314 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19655222..19655843 | 315..936 | 100 | <- | Minus |
3R | 19655908..19656221 | 1..314 | 100 | Minus |
Translation from 502 to 843
> GH25417.pep MVGPFMQGLFLIGIIYWYSKGMMSMINDYYRSEFQRKLQTEPAKTRAETP INVDNFMDYVRELDTPDEVARIPAEGTESPPMGNTYCHILRRFLEITGTL PPFDVCLVTSNIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17349-PA | 114 | GF17349-PA | 1..114 | 1..113 | 439 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15753-PA | 115 | GG15753-PA | 1..115 | 1..113 | 512 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23288-PA | 121 | GH23288-PA | 1..109 | 1..106 | 310 | 55 | Plus |
Dgri\GH19616-PA | 121 | GH19616-PA | 1..109 | 1..106 | 305 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Xport-B-PB | 113 | CG42508-PB | 1..113 | 1..113 | 604 | 100 | Plus |
Xport-B-PA | 113 | CG42508-PA | 1..113 | 1..113 | 604 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10325-PA | 117 | GI10325-PA | 1..109 | 1..106 | 303 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12529-PA | 114 | GL12529-PA | 1..112 | 1..110 | 387 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27541-PA | 114 | GA27541-PA | 1..112 | 1..110 | 384 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26885-PA | 113 | GM26885-PA | 1..113 | 1..113 | 555 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20093-PA | 113 | GD20093-PA | 1..113 | 1..113 | 563 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10180-PA | 117 | GJ10180-PA | 1..109 | 1..106 | 314 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25103-PA | 111 | GE25103-PA | 1..111 | 1..113 | 484 | 81.4 | Plus |
Translation from 502 to 843
> GH25417.hyp MVGPFMQGLFLIGIIYWYSKGMMSMINDYYRSEFQRKLQTEPAKTRAETP INVDNFMDYVRELDTPDEVARIPAEGTESPPMGNTYCHILRRFLEITGTL PPFDVCLVTSNIR*