GH25431.complete Sequence
698 bp (698 high quality bases) assembled on 2002-06-05
GenBank Submission: AY119544
> GH25431.complete
CAGAAATCTTACAAAATTACAGTCAGCTACATAGTATTTGTTTAACAATT
TTGATTTCAAATTATTGCAAGTAAACGATGCAGCCCCGAAATAAATTAAG
CAAGTGTTTGATCTATATAACGCCCTGTGTGCAGCAATTGTGTTTCTATG
GCACTAGGCGACATTTACTGGCCATGCAGTCCTTGTCCGCCCAAAGGAAT
CGGAAGTCTGATGTCTCCGAAAAGAAGGCAGTAGAGACAACAGTCGAATG
GGGGCGTGGCCCCCAAGCGGGCGACCGCCTTCCAACAGCCGTTAGTCTGC
TCCGTCGAAATTCGACAGATTCCGCGAGGAACGAGGTGAAAACCGCATTC
ATTCGATACGAAAAGTCTATGAACGAATTGGCCAAAAGTGCCCGAAAGCT
ATATAAAAATGCCCGGCTAAGGAGCTTGCCTTTGAGGAAGCCCATGATGC
GAGGAAAAATCGGTGACTCTGATGCAAGACCCCTAAGAACACCGGTGCCC
AGTGCTTGGGCCATAACCGAGCGGGAAAATAAATAGCTGGCATAAGCAGA
AGAGATGGTTTTAAGGCAAGGAAATGCGTGTAAATGCGTGTAATTTTACT
TAAGTCTGTAGATATATATCCAAATATATTTTTCCTTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GH25431.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:45:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1835-RA | 713 | CG1835-RA | 77..713 | 1..637 | 3185 | 100 | Plus |
CG1835.a | 680 | CG1835.a | 55..636 | 1..583 | 2875 | 99.8 | Plus |
CG1835-RB | 704 | CG1835-RB | 77..660 | 1..583 | 2850 | 99.4 | Plus |
CG1835.a | 680 | CG1835.a | 625..677 | 582..634 | 250 | 98.1 | Plus |
CG1835-RB | 704 | CG1835-RB | 649..701 | 582..634 | 235 | 96.2 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 20534509..20534834 | 139..464 | 1600 | 99.4 | Plus |
chrX | 22417052 | chrX | 20534896..20535071 | 462..637 | 880 | 100 | Plus |
chrX | 22417052 | chrX | 20535291..20535465 | 462..637 | 830 | 99.4 | Plus |
chrX | 22417052 | chrX | 20533756..20533893 | 1..138 | 690 | 100 | Plus |
chrX | 22417052 | chrX | 20535685..20535846 | 462..634 | 615 | 93.1 | Plus |
chrX | 22417052 | chrX | 20536071..20536234 | 462..634 | 605 | 91.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:07:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:58:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20669107..20669432 | 139..464 | 1630 | 100 | Plus |
X | 23542271 | X | 20669494..20669674 | 462..642 | 905 | 100 | Plus |
X | 23542271 | X | 20669889..20670068 | 462..642 | 855 | 99.4 | Plus |
X | 23542271 | X | 20668354..20668491 | 1..138 | 690 | 100 | Plus |
X | 23542271 | X | 20670283..20670452 | 462..642 | 640 | 92.8 | Plus |
X | 23542271 | X | 20670669..20670840 | 462..642 | 630 | 91.2 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:05:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 20654199..20654524 | 139..464 | 1630 | 100 | Plus |
X | 23527363 | X | 20654586..20654766 | 462..642 | 905 | 100 | Plus |
X | 23527363 | X | 20654981..20655160 | 462..642 | 865 | 99.4 | Plus |
X | 23527363 | X | 20653446..20653583 | 1..138 | 690 | 100 | Plus |
X | 23527363 | X | 20655375..20655495 | 462..583 | 570 | 99.1 | Plus |
X | 23527363 | X | 20655761..20655883 | 462..583 | 545 | 97.5 | Plus |
X | 23527363 | X | 20655484..20655544 | 582..642 | 275 | 96.7 | Plus |
X | 23527363 | X | 20655872..20655932 | 582..642 | 260 | 95 | Plus |
Blast to na_te.dros performed 2019-03-16 23:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib4 | 2656 | transib4 TRANSIB4 2656bp | 1736..1792 | 36..92 | 114 | 66.7 | Plus |
GH25431.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:59:32 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 20533756..20533893 | 1..138 | 100 | -> | Plus |
chrX | 20534509..20534832 | 139..462 | 99 | -> | Plus |
chrX | 20534897..20535071 | 463..637 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:55:59 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 1..459 | 78..536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:39:18 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 1..459 | 78..536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:55:19 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 1..459 | 78..536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:16:19 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 1..459 | 78..536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:06:37 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 1..459 | 78..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:44:03 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 33..669 | 1..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:39:18 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 27..663 | 1..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:19 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 27..663 | 1..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:16:20 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 33..669 | 1..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:37 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1835-RA | 27..663 | 1..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:32 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20668354..20668491 | 1..138 | 100 | -> | Plus |
X | 20669107..20669430 | 139..462 | 100 | -> | Plus |
X | 20669495..20669669 | 463..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:32 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20668354..20668491 | 1..138 | 100 | -> | Plus |
X | 20669107..20669430 | 139..462 | 100 | -> | Plus |
X | 20669495..20669669 | 463..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:32 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20668354..20668491 | 1..138 | 100 | -> | Plus |
X | 20669107..20669430 | 139..462 | 100 | -> | Plus |
X | 20669495..20669669 | 463..637 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:19 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20539381..20539518 | 1..138 | 100 | -> | Plus |
arm_X | 20540134..20540457 | 139..462 | 100 | -> | Plus |
arm_X | 20540522..20540696 | 463..637 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:52:09 Download gff for
GH25431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20654199..20654522 | 139..462 | 100 | -> | Plus |
X | 20654587..20654761 | 463..637 | 100 | | Plus |
X | 20653446..20653583 | 1..138 | 100 | -> | Plus |
GH25431.hyp Sequence
Translation from 77 to 535
> GH25431.hyp
MQPRNKLSKCLIYITPCVQQLCFYGTRRHLLAMQSLSAQRNRKSDVSEKK
AVETTVEWGRGPQAGDRLPTAVSLLRRNSTDSARNEVKTAFIRYEKSMNE
LAKSARKLYKNARLRSLPLRKPMMRGKIGDSDARPLRTPVPSAWAITERE
NK*
GH25431.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:27:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1835-PA | 152 | CG1835-PA | 1..152 | 1..152 | 780 | 100 | Plus |
CG1835-PC | 120 | CG1835-PC | 1..120 | 33..152 | 604 | 100 | Plus |
GH25431.pep Sequence
Translation from 77 to 535
> GH25431.pep
MQPRNKLSKCLIYITPCVQQLCFYGTRRHLLAMQSLSAQRNRKSDVSEKK
AVETTVEWGRGPQAGDRLPTAVSLLRRNSTDSARNEVKTAFIRYEKSMNE
LAKSARKLYKNARLRSLPLRKPMMRGKIGDSDARPLRTPVPSAWAITERE
NK*
GH25431.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:06:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19695-PA | 183 | GG19695-PA | 1..123 | 1..123 | 413 | 66.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1835-PA | 152 | CG1835-PA | 1..152 | 1..152 | 780 | 100 | Plus |
CG1835-PC | 120 | CG1835-PC | 1..120 | 33..152 | 604 | 100 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:06:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17893-PA | 163 | GE17893-PA | 1..150 | 1..152 | 444 | 63.8 | Plus |