BDGP Sequence Production Resources |
Search the DGRC for GH25564
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 255 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5641-RA |
Protein status: | GH25564.pep: gold |
Preliminary Size: | 1623 |
Sequenced Size: | 1372 |
Gene | Date | Evidence |
---|---|---|
CG5641 | 2001-01-01 | Release 2 assignment |
CG5641 | 2001-07-04 | Blastp of sequenced clone |
CG5641 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5641 | 2008-04-29 | Release 5.5 accounting |
CG5641 | 2008-08-15 | Release 5.9 accounting |
CG5641 | 2008-12-18 | 5.12 accounting |
1372 bp (1372 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051610
> GH25564.complete TTAAAAAAAACAGAACGCTCCGGCGTTGCGAAAATTATTAAAAATTCATC CCCACAGGAATATGGTTCGCGGAGCTCTCCGAGGTGGCCGCCCCATGCGC GGCGGCATACGTCCGCCGTTCAAAAAGACATTCGTGCCGCGCCACCCCTT CGATCTGACCCTCGCGGAGGTCTTCTTTCCCAAAGTTCCATCCGCCGGCG CCGTTGACGATTCTGCTTTGACTGCGGCGCTGCTGAAGCGTAACCAGGAC CTGAGTCCCACTCCCAGCGAGCAGACGGCTATTGGCAATCTAGTGACCAA GGTGCAGGCTGTTCTCGACAATCTGGTGGTTGCACCCGGGGATCTGACAA CTTGTCAACTGGAGGAAGTGCGTCAGGTTGGCTCCTTCAAGAAGGGCACC ATACTGACGGGCAACAATGTAGCCGATGTGGTGGTTATCCTCAAAACCCT GCCCACCAAGGAGGCCGTCGATGCGCTGGCCAAAAAAGTGGAGGCCGACC TGAAGGCCAGCATGAAGACTGAAGTTCTGACCAAGGGCGATCAGCACACC GTACAGATCCATGAGCGGGGCTTCGACATCGCCAACGTGCATGCCAAGGT GCGCATTCTGATCGCCACCTTGCCGCAGAATCTTCGCAAGCTGGAGCCTG AGATCCATTTGGATCACAAACTGATGCAGAGCCATCTGGCTGCCATTCGG CACACGCGCTGGTTTGAGGAAAATGCCCACCACTCCTCGATAAAGGTGCT CATTCGCATTCTCAAGGATCTCACTAGGCGTTTCGACGCTTTTTCGCCGC TGTCGGCCTGGATGCTGGACCTGATCGCCCATTTGGCCATCATGAACAAC CCGTCGCGACAGGCACTGCCCATCAACCTGGCCTTCCGTCGCGTCTTTCA GCTACTCTCCGCCGGGCTCTTCCTGCCGGGCTCGGCCGGCATCACGGATC CCACCGAGCCGGGACACATCCGTGTGCACACTGCCATGACATTGGAGCAG CAGGATGTGTGCTGCTACACATCGCAGACACTACTGCGCGTGCTGGCCCA CGGCGGATACAAACACATTTTGGGACTGGAGGGCAACACCAGCGTTGTGC GCGAAATGTCCGTCTGGAACGGCGTGTGCATTTCCCCGCTGACCGCTGTC TACGAGAAGCCAACGGACAAGAAGGAGGGCGACCTCGAGGAGGACATCGA CATGATCGAGAATGAGAACGAAGAAGAGGGCAGCGACGATGGCGCCGAGT AATACAGACCAAGCTATTCATTTACAAGTGTATTTAAATTCCCAACCCAT GATTCAATTGATTATACTATTCCCAAGTATGGGTTCATCCTCACCAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8253183..8254172 | 1345..356 | 4935 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 8254424..8254650 | 227..1 | 1135 | 100 | Minus |
chr3R | 27901430 | chr3R | 8254234..8254363 | 355..226 | 650 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12427793..12428784 | 1347..356 | 4960 | 100 | Minus |
3R | 32079331 | 3R | 12429036..12429262 | 227..1 | 1135 | 100 | Minus |
3R | 32079331 | 3R | 12428846..12428975 | 355..226 | 650 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12168624..12169615 | 1347..356 | 4960 | 100 | Minus |
3R | 31820162 | 3R | 12169867..12170093 | 227..1 | 1135 | 100 | Minus |
3R | 31820162 | 3R | 12169677..12169806 | 355..226 | 650 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8253183..8254172 | 356..1345 | 99 | <- | Minus |
chr3R | 8254234..8254362 | 227..355 | 100 | <- | Minus |
chr3R | 8254425..8254650 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 1..1191 | 62..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 1..1191 | 62..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 1..1191 | 62..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 1..1191 | 62..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 1..1191 | 62..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 19..1363 | 1..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 19..1363 | 1..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 21..1365 | 1..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 19..1363 | 1..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5641-RA | 21..1365 | 1..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12428846..12428974 | 227..355 | 100 | <- | Minus |
3R | 12429037..12429262 | 1..226 | 100 | Minus | |
3R | 12427795..12428784 | 356..1345 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12428846..12428974 | 227..355 | 100 | <- | Minus |
3R | 12429037..12429262 | 1..226 | 100 | Minus | |
3R | 12427795..12428784 | 356..1345 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12428846..12428974 | 227..355 | 100 | <- | Minus |
3R | 12429037..12429262 | 1..226 | 100 | Minus | |
3R | 12427795..12428784 | 356..1345 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8253517..8254506 | 356..1345 | 100 | <- | Minus |
arm_3R | 8254568..8254696 | 227..355 | 100 | <- | Minus |
arm_3R | 8254759..8254984 | 1..226 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12168626..12169615 | 356..1345 | 100 | <- | Minus |
3R | 12169677..12169805 | 227..355 | 100 | <- | Minus |
3R | 12169868..12170093 | 1..226 | 100 | Minus |
Translation from 61 to 1251
> GH25564.hyp MVRGALRGGRPMRGGIRPPFKKTFVPRHPFDLTLAEVFFPKVPSAGAVDD SALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLDNLVVAPGDLTTCQL EEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEADLKAS MKTEVLTKGDQHTVQIHERGFDIANVHAKVRILIATLPQNLRKLEPEIHL DHKLMQSHLAAIRHTRWFEENAHHSSIKVLIRILKDLTRRFDAFSPLSAW MLDLIAHLAIMNNPSRQALPINLAFRRVFQLLSAGLFLPGSAGITDPTEP GHIRVHTAMTLEQQDVCCYTSQTLLRVLAHGGYKHILGLEGNTSVVREMS VWNGVCISPLTAVYEKPTDKKEGDLEEDIDMIENENEEEGSDDGAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5641-PA | 396 | CG5641-PA | 1..396 | 1..396 | 2030 | 100 | Plus |
Zn72D-PD | 884 | CG5215-PD | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PC | 884 | CG5215-PC | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PF | 884 | CG5215-PF | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PB | 884 | CG5215-PB | 545..836 | 62..352 | 194 | 25.7 | Plus |
Translation from 61 to 1251
> GH25564.pep MVRGALRGGRPMRGGIRPPFKKTFVPRHPFDLTLAEVFFPKVPSAGAVDD SALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLDNLVVAPGDLTTCQL EEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEADLKAS MKTEVLTKGDQHTVQIHERGFDIANVHAKVRILIATLPQNLRKLEPEIHL DHKLMQSHLAAIRHTRWFEENAHHSSIKVLIRILKDLTRRFDAFSPLSAW MLDLIAHLAIMNNPSRQALPINLAFRRVFQLLSAGLFLPGSAGITDPTEP GHIRVHTAMTLEQQDVCCYTSQTLLRVLAHGGYKHILGLEGNTSVVREMS VWNGVCISPLTAVYEKPTDKKEGDLEEDIDMIENENEEEGSDDGAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17043-PA | 396 | GF17043-PA | 1..396 | 1..396 | 2047 | 95.2 | Plus |
Dana\GF10657-PA | 883 | GF10657-PA | 557..840 | 68..352 | 182 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17126-PA | 396 | GG17126-PA | 1..396 | 1..396 | 2084 | 98.2 | Plus |
Dere\GG13496-PA | 890 | GG13496-PA | 551..842 | 62..352 | 189 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17463-PA | 394 | GH17463-PA | 1..394 | 1..396 | 1941 | 90.9 | Plus |
Dgri\GH14705-PA | 923 | GH14705-PA | 734..875 | 209..352 | 155 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5641-PA | 396 | CG5641-PA | 1..396 | 1..396 | 2030 | 100 | Plus |
Zn72D-PD | 884 | CG5215-PD | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PC | 884 | CG5215-PC | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PF | 884 | CG5215-PF | 545..836 | 62..352 | 194 | 25.7 | Plus |
Zn72D-PB | 884 | CG5215-PB | 545..836 | 62..352 | 194 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22787-PA | 394 | GI22787-PA | 1..394 | 1..396 | 1895 | 88.6 | Plus |
Dmoj\GI12251-PA | 911 | GI12251-PA | 722..863 | 209..352 | 157 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27175-PA | 383 | GL27175-PA | 1..383 | 12..396 | 1902 | 91.9 | Plus |
Dper\GL25096-PA | 915 | GL25096-PA | 605..856 | 100..340 | 173 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19024-PA | 383 | GA19024-PA | 1..383 | 12..396 | 1902 | 91.9 | Plus |
Dpse\GA18742-PA | 915 | GA18742-PA | 605..856 | 100..340 | 173 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26008-PA | 396 | GM26008-PA | 1..396 | 1..396 | 2089 | 99 | Plus |
Dsec\GM24445-PA | 884 | GM24445-PA | 545..836 | 62..352 | 186 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20566-PA | 396 | GD20566-PA | 1..396 | 1..396 | 2090 | 99 | Plus |
Dsim\GD12514-PA | 884 | GD12514-PA | 545..836 | 62..352 | 186 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22789-PA | 394 | GJ22789-PA | 1..394 | 1..396 | 1948 | 91.9 | Plus |
Dvir\GJ11483-PA | 906 | GJ11483-PA | 545..859 | 34..352 | 167 | 24.6 | Plus |