BDGP Sequence Production Resources |
Search the DGRC for GH25655
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 256 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1827-RD |
Protein status: | GH25655.pep: gold |
Preliminary Size: | 1268 |
Sequenced Size: | 1301 |
Gene | Date | Evidence |
---|---|---|
CG1827 | 2001-01-01 | Release 2 assignment |
CG1827 | 2002-06-12 | Blastp of sequenced clone |
CG1827 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1827 | 2008-04-29 | Release 5.5 accounting |
CG1827 | 2008-08-15 | Release 5.9 accounting |
CG1827 | 2008-12-18 | 5.12 accounting |
1301 bp (1301 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122133
> GH25655.complete TGATACACCAAGACTTCTCGTAGAGACCATTACGATTAACCATGAGAAGG CACTTGCGGGCAAGTCTTTGGATCCTTTGTTTGGCCACCATGGCGTTTTC CATCCTTGCGGCAGTAAATACTTCGCCCAAACCAACGCTGACTTCGGCGT TTAGTGGAAAAGCTGGCACCACTGCCGTGAAGGCGAATAAGACGACGGGT GAGCTGCTGCCCATGGTCATTAACACTTGGAACTTCACGGCTGCCAATGT GCTCGCCTGGCGAATCCTGAAGCAAAGCAAGGGTGGACTCCGGCAGACGC GGAATGCGGTAGTGGAGGGCTGCTCGAAGTGTGAGAAACTCCAGTGTGAC CGAACGGTGGGCTATGGCGGATCGCCGGACGAGTTGGGCGAAACCACACT GGATGCCATGGTCATGGACGGGGCCACCATGGATGTGGGGGCAGTGGCTG GTCTGCGACGCATTAAGGATGCCATTAAGGTAGCCCGGCATGTTCTGGAA CACACGCAGCACACCATGCTGGTGGGTGATGCGGCGTCAGCTTTCGCCAA TGCTATGGGATTCGAATCAGAGTCGCTGGTCACGCCGGAGTCGAAGGACA TGTGGTTACAGTGGACGGCTGAGAACTGCCAGCCAAACTTCTGGAAGAAC GTTCACCCGGATCCCAAGGTCTCTTGCGGCCCGTATAAGCCGCGGCCGAC TCCGCTGACCCGCTGGAAGGAGGACCGTGCCCGCAATGAGTATGAGATCG GACGCAAGAACCACGATACCATCGGCATGATCGCCATCGACGTGGAAAGC AACATCCACGCCGGCACCTCCACCAACGGGGCGCGGCACAAGATTCCCGG ACGGGTCGGCGACTCCCCCATTCCGGGTGCTGGCGCTTATGCAGACAACG AGGTGGGTGCAGCCGTGGCAACCGGAGATGGAGATGTGATGATGCGCTTC CTGCCCTCCCTGCTAGCGGTGGAGACCATGCGGGCGGGAAAACCTCCGGC TGAGGCAGCTCAAGAGGGCCTTCGCCGCATTCTCAAGCACCACAAGGATT TCATGGGTGCTCTCATCGCCGTAGATCGGCTGGGTAATTATGGCGCTGCC TGCTACGGCCTGGCCGAATTCCCCTTTATGGTTAGCAGTCCAGCCGGAGC GGATGGGCCTACGCGCTTGGAAACGGTCAAATGCATAGGTGGTCAGGACA AAGTAAATATCGTGGCGTTGTGAGGTGGCGAAAACTGTAACGTATTTCAA TAAAATTTAAATTTCGTGGAGTTCTCATCTGCAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1827.a | 1453 | CG1827.a | 76..1359 | 1..1284 | 6420 | 100 | Plus |
CG1827-RC | 1453 | CG1827-RC | 76..1359 | 1..1284 | 6420 | 100 | Plus |
CG1827-RB | 1328 | CG1827-RB | 199..1328 | 153..1282 | 5650 | 100 | Plus |
CG1827-RB | 1328 | CG1827-RB | 1..147 | 8..154 | 735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5476809..5477938 | 153..1282 | 5650 | 100 | Plus |
chr2R | 21145070 | chr2R | 5476604..5476757 | 1..154 | 770 | 100 | Plus |
chr2R | 21145070 | chr2R | 15172987..15173236 | 1008..759 | 380 | 76.8 | Minus |
chr2R | 21145070 | chr2R | 15173424..15173587 | 562..399 | 235 | 76.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9589314..9590445 | 153..1284 | 5660 | 100 | Plus |
2R | 25286936 | 2R | 9589109..9589262 | 1..154 | 770 | 100 | Plus |
2R | 25286936 | 2R | 19285812..19286061 | 1008..759 | 380 | 76.8 | Minus |
2R | 25286936 | 2R | 19286249..19286412 | 562..399 | 235 | 76.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9590513..9591644 | 153..1284 | 5660 | 100 | Plus |
2R | 25260384 | 2R | 9590308..9590461 | 1..154 | 770 | 100 | Plus |
2R | 25260384 | 2R | 19287011..19287173 | 1008..846 | 290 | 78.5 | Minus |
2R | 25260384 | 2R | 19287475..19287611 | 535..399 | 205 | 76.6 | Minus |
2R | 25260384 | 2R | 19287190..19287260 | 829..759 | 145 | 80.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5476604..5476757 | 1..154 | 100 | -> | Plus |
chr2R | 5476811..5477938 | 155..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 1..1134 | 90..1223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 1..1134 | 90..1223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RD | 1..1182 | 42..1223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 1..1134 | 90..1223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RD | 1..1182 | 42..1223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 4..1285 | 1..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 4..1285 | 1..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RD | 60..1341 | 1..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RC | 4..1285 | 1..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1827-RD | 60..1341 | 1..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9589109..9589262 | 1..154 | 100 | -> | Plus |
2R | 9589316..9590443 | 155..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9589109..9589262 | 1..154 | 100 | -> | Plus |
2R | 9589316..9590443 | 155..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9589109..9589262 | 1..154 | 100 | -> | Plus |
2R | 9589316..9590443 | 155..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5476614..5476767 | 1..154 | 100 | -> | Plus |
arm_2R | 5476821..5477948 | 155..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9590515..9591642 | 155..1282 | 100 | Plus | |
2R | 9590308..9590461 | 1..154 | 100 | -> | Plus |
Translation from 41 to 1222
> GH25655.pep MRRHLRASLWILCLATMAFSILAAVNTSPKPTLTSAFSGKAGTTAVKANK TTGELLPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKL QCDRTVGYGGSPDELGETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARH VLEHTQHTMLVGDAASAFANAMGFESESLVTPESKDMWLQWTAENCQPNF WKNVHPDPKVSCGPYKPRPTPLTRWKEDRARNEYEIGRKNHDTIGMIAID VESNIHAGTSTNGARHKIPGRVGDSPIPGAGAYADNEVGAAVATGDGDVM MRFLPSLLAVETMRAGKPPAEAAQEGLRRILKHHKDFMGALIAVDRLGNY GAACYGLAEFPFMVSSPAGADGPTRLETVKCIGGQDKVNIVAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12478-PA | 347 | GF12478-PA | 1..347 | 1..342 | 1430 | 79.4 | Plus |
Dana\GF12480-PA | 231 | GF12480-PA | 1..222 | 172..393 | 962 | 77.9 | Plus |
Dana\GF11609-PA | 378 | GF11609-PA | 26..359 | 49..391 | 849 | 47.2 | Plus |
Dana\GF12479-PA | 135 | GF12479-PA | 10..131 | 44..165 | 489 | 74.6 | Plus |
Dana\GF21911-PA | 332 | GF21911-PA | 34..274 | 72..325 | 271 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24090-PA | 396 | GG24090-PA | 1..396 | 1..393 | 1980 | 93.5 | Plus |
Dere\GG20738-PA | 399 | GG20738-PA | 50..378 | 54..388 | 835 | 45.7 | Plus |
Dere\GG17888-PA | 331 | GG17888-PA | 34..295 | 72..351 | 263 | 30.1 | Plus |
Dere\GG13500-PA | 364 | GG13500-PA | 61..283 | 107..333 | 181 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22932-PA | 393 | GH22932-PA | 28..382 | 28..382 | 1324 | 68.5 | Plus |
Dgri\GH12871-PA | 327 | GH12871-PA | 33..290 | 71..351 | 240 | 29.9 | Plus |
Dgri\GH11081-PA | 326 | GH11081-PA | 43..288 | 79..351 | 239 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1827-PD | 393 | CG1827-PD | 1..393 | 1..393 | 2066 | 100 | Plus |
CG10474-PA | 341 | CG10474-PA | 1..330 | 58..387 | 1013 | 59.3 | Plus |
CG4372-PA | 397 | CG4372-PA | 7..378 | 13..388 | 817 | 42.6 | Plus |
CG7860-PB | 332 | CG7860-PB | 34..296 | 72..351 | 263 | 29.4 | Plus |
CG7860-PA | 332 | CG7860-PA | 34..296 | 72..351 | 263 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18418-PA | 418 | GI18418-PA | 80..414 | 56..393 | 1387 | 73.7 | Plus |
Dmoj\GI17598-PA | 341 | GI17598-PA | 95..305 | 107..351 | 282 | 33.7 | Plus |
Dmoj\GI14971-PA | 329 | GI14971-PA | 34..292 | 72..351 | 233 | 28.4 | Plus |
Dmoj\GI12255-PA | 362 | GI12255-PA | 61..281 | 107..333 | 172 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17147-PA | 388 | GL17147-PA | 7..388 | 9..391 | 1512 | 72.5 | Plus |
Dper\GL17509-PA | 457 | GL17509-PA | 23..361 | 45..388 | 832 | 47.8 | Plus |
Dper\GL16551-PA | 325 | GL16551-PA | 52..292 | 91..351 | 238 | 28.4 | Plus |
Dper\GL25099-PA | 366 | GL25099-PA | 61..260 | 107..304 | 195 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14866-PA | 388 | GA14866-PA | 7..388 | 9..391 | 1522 | 72.7 | Plus |
Dpse\GA14866-PB | 348 | GA14866-PB | 14..348 | 57..391 | 1511 | 80.3 | Plus |
Dpse\GA18140-PA | 457 | GA18140-PA | 23..361 | 45..388 | 840 | 47.5 | Plus |
Dpse\GA20639-PA | 325 | GA20639-PA | 52..292 | 91..351 | 235 | 28.4 | Plus |
Dpse\GA18757-PA | 366 | GA18757-PA | 61..260 | 107..304 | 195 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21137-PA | 393 | GM21137-PA | 1..393 | 1..393 | 2040 | 96.7 | Plus |
Dsec\GM15681-PA | 397 | GM15681-PA | 17..378 | 22..388 | 835 | 43.2 | Plus |
Dsec\GM19841-PA | 84 | GM19841-PA | 6..80 | 255..329 | 285 | 70.7 | Plus |
Dsec\GM24449-PA | 365 | GM24449-PA | 61..284 | 107..333 | 187 | 28.4 | Plus |
Dsec\GM13163-PA | 89 | GM13163-PA | 1..63 | 198..264 | 151 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10667-PA | 393 | GD10667-PA | 1..393 | 1..393 | 2047 | 97.2 | Plus |
Dsim\GD25331-PA | 341 | GD25331-PA | 1..330 | 58..387 | 1024 | 59.2 | Plus |
Dsim\GD25160-PA | 397 | GD25160-PA | 50..378 | 54..388 | 844 | 46 | Plus |
Dsim\GD24689-PA | 332 | GD24689-PA | 34..296 | 72..351 | 236 | 28.3 | Plus |
Dsim\GD12517-PA | 365 | GD12517-PA | 61..284 | 107..333 | 187 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21504-PA | 333 | GJ21504-PA | 1..333 | 58..393 | 1367 | 74.7 | Plus |
Dvir\GJ17943-PA | 345 | GJ17943-PA | 26..309 | 47..351 | 286 | 30.7 | Plus |
Dvir\GJ18932-PA | 328 | GJ18932-PA | 52..291 | 91..351 | 231 | 28.8 | Plus |
Dvir\GJ11486-PA | 360 | GJ11486-PA | 61..279 | 107..333 | 175 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15947-PA | 336 | GK15947-PA | 1..336 | 58..393 | 1482 | 78.9 | Plus |
Dwil\GK15948-PA | 393 | GK15948-PA | 5..382 | 11..382 | 1234 | 62.5 | Plus |
Dwil\GK18649-PA | 334 | GK18649-PA | 61..294 | 91..351 | 255 | 30.8 | Plus |
Dwil\GK18410-PA | 334 | GK18410-PA | 61..294 | 91..351 | 254 | 30.4 | Plus |
Dwil\GK20035-PA | 327 | GK20035-PA | 50..287 | 91..351 | 253 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19290-PA | 396 | GE19290-PA | 1..396 | 1..393 | 1945 | 91.4 | Plus |
Dyak\GE12034-PA | 341 | GE12034-PA | 1..330 | 58..387 | 1056 | 62 | Plus |
Dyak\GE12031-PA | 295 | GE12031-PA | 2..284 | 105..387 | 875 | 60.7 | Plus |
Dyak\GE13669-PA | 399 | GE13669-PA | 50..378 | 54..388 | 828 | 45.7 | Plus |
Dyak\GE17195-PA | 331 | GE17195-PA | 52..295 | 91..351 | 245 | 30 | Plus |
Translation from 41 to 1222
> GH25655.hyp MRRHLRASLWILCLATMAFSILAAVNTSPKPTLTSAFSGKAGTTAVKANK TTGELLPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKL QCDRTVGYGGSPDELGETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARH VLEHTQHTMLVGDAASAFANAMGFESESLVTPESKDMWLQWTAENCQPNF WKNVHPDPKVSCGPYKPRPTPLTRWKEDRARNEYEIGRKNHDTIGMIAID VESNIHAGTSTNGARHKIPGRVGDSPIPGAGAYADNEVGAAVATGDGDVM MRFLPSLLAVETMRAGKPPAEAAQEGLRRILKHHKDFMGALIAVDRLGNY GAACYGLAEFPFMVSSPAGADGPTRLETVKCIGGQDKVNIVAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1827-PD | 393 | CG1827-PD | 1..393 | 1..393 | 2066 | 100 | Plus |
CG10474-PA | 341 | CG10474-PA | 1..330 | 58..387 | 1013 | 59.3 | Plus |
CG4372-PA | 397 | CG4372-PA | 7..378 | 13..388 | 817 | 42.6 | Plus |
CG7860-PB | 332 | CG7860-PB | 34..296 | 72..351 | 263 | 29.4 | Plus |
CG7860-PA | 332 | CG7860-PA | 34..296 | 72..351 | 263 | 29.4 | Plus |