Clone GH25737 Report

Search the DGRC for GH25737

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:257
Well:37
Vector:pOT2
Associated Gene/TranscriptCG10803-RA
Protein status:GH25737.pep: gold
Preliminary Size:2643
Sequenced Size:2609

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10803 2001-01-01 Release 2 assignment
CG10803 2001-09-19 Blastp of sequenced clone
CG10803 2003-01-01 Sim4 clustering to Release 3
CG10803 2008-04-29 Release 5.5 accounting
CG10803 2008-08-15 Release 5.9 accounting
CG10803 2008-12-18 5.12 accounting

Clone Sequence Records

GH25737.complete Sequence

2609 bp (2609 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058457

> GH25737.complete
CGAATTGCCAACGCTCTGTACAAGTGATGTACAACACGAGTTAAATACAA
AACAAAACGAACGGATAAAAGTTGCACGCTGGGCGAATCGTGACAAAGAG
GGCGTGGCAAATCGAAATATAGTATAGATCAAATCCCCAGAAGGCGCGGC
ATAAACGTAATATGCGAAAATCGCTGCCATGAAAAAGGGCAAGGGATCAA
GCTCCCTTGGATCGAAGGAATCATCGGGGAGACCATCCACGGCAGTCCTG
GTGTTCAAGAAGTGCGCTAGATTTGCGGACTCTTCAGAATCGGCGGAGAT
CCAGCAGGACGGCAAGGAGCAACTGCCTGAGAGGCAAGACTCGCTGGATG
CCAAGGAATCTGCAGGAATGGAAAAAGAGGCGATTAGCAATCAGCCATTA
AAGGATGAGCCATCGAAAGATGAACCTAACCAAAGCGAGGGCACTGCCAT
TTCCACCATACCGGCGATTGATAAACTACGTCGCTTCTGCTTTATTGGAT
CCACGGACGAGCCCGTCTATACCACGCCCGCACTGGATCTTGTTGTCGAG
AACAATTTCGCATCGCTAAAGGAACTCTGCTCCCAAGTGAGTGAAGACGA
GCTGGTCGAGTGCTTGTTGAGCGTTTTGGGCAGCGAACCAAATGAGGAGC
AACCTCCCCGACCCGACGAGCCGCTCCTAATCCTGGCTGTTTTCTTTACC
ACGTGCGAAGACGAGAAGAAGCGAAATGCGGTGCGTAATAGATTCACCGA
CCTGATCACCAGCGAATCGGATCTTCTACTGTTCGTCCAGTTGGTCAAGC
GAGTCCAGAAGTTGCTCGAACGTAAAACGCCCTTCAATCGCACAGTGCGA
AAGGCCGTCCTCAACTGGTATGGCACGAAATCGCTTGATCGCCTTCTCCA
CTTCTGGTCAATAGGCGATGGAAATCGTTGGCCTGCGCATCGCGATCTAC
TGTACCGCCTCCATTTTCGGCATGCCAATTTTTTACCGGAAATCATTGCT
GCCTTAAGGCTGCTCTCATCATCGCCAAAGGAGCTATCGCAGTGGCCTGA
TTTTTTAACGCCCTTGACCAGCTTTCGCGAAACTATTGAGGGTGTTGTGA
AGCTTCGGCTACTCACGGATCCCGAACAGGCTATCTCCATTGTGAAGAAG
TTGTCGCTGAGCTGGGAGCATGTGCCTTTTCATTTGCTTCACGACCCCAG
GCTGGCGCATTTTCTTATTCCACACATGAGCTATGAGCAACTTCTTCAGA
AATGGCCACGCCTCTCGCGACTTAACTCCCGAGTGCGCCCCTTTGCTGAG
CAATTGCTGGATAAGAAGAAGCTTAAGGCGAGCAATGTTCCGCCCGTACG
TCTGCTGTTGGAGGATATGCGTTTGAGGAAGCCCAAAAAGGTGGTTAATC
AGTTGGTACTACCTTCGTCACTCAAAAACAAGAATACATTTAAATTCCAG
TGTGCAACTACTTCGTTCCAAAAGGCGAGTTTCCTGCATAGCGTCTACGA
AATATCCTTTGGCCTGAACAAGGCACTCGGTAGGCGACTGCACATTACCC
TCAATCTGGAGCAGGCCTATCTGGGCAAATACCTTTCTGGTCCATGTCGT
TCGCTGAAGTACTTAGACGCCCTGGTGGCATTGGGTTTTGGCTATTTCCG
CAGCGACCGAAAGGTGACGGTGGAGTTTTGGCACGACCGCAGTGGCAAAT
TGAAGGCGTTGCCGTGGACAAATGAGATGTCTGTTTCAGAGGCCAAGACC
TGTTGCGAGAATCAGAAGGTGGGCAAAGTGAGGCAATCGCTAAATGAAAT
TCTGTTCAGAGCGCTATTGGATATGCAGAATACGTTCGACGTGTTTTTGG
TACTAGTGCCGGGTGCCGCGCGAGGAAATCCGGAAAATAATTCAAAGTGC
TTGGCTGCTCTAATGGATAAGTATCGCGAAAAGCGAAACTCTAATGCTAA
ATTCATAATGGTGAGCCTGCGGCAGCGTCAACGCTCCATGATATATTCCA
GCGGACGAAACGAGAACTTGTTAGAGTTGTGCAGCCTGGATAAGCACACA
CCGCGTTTGATTAACGCATTTGTCCGCAATAAGTTCTACTAGACGGTGAG
CTGCATTGCGAATATCGGACGACCCATTTCATCGCACAACTGCAGGCACA
AAGCAGTTCCATTTGTTGAAGGACGATGGCCATCGGTTAGTTGCCATCGG
CCATCTCTCTCGCTTTCATAGATGCCTGGTCGTTCGGTCCTCTCACTCCA
TTTTCGAATAGCTTTTGTGTAACATATTCATAGGCCCTTGGTGTGTAATC
GTTGTAGAACCAGGCCACCAACTCAATGCTACATTCATATTTACATACTA
CTAATTGTAATAGTTGCATCCCGGAATCCAGAATTTAAAATTCCTATCGG
GCTAGTAAGATATTATCGCTCGTTTTGTGTAATGAAATTGTGTATTAGCA
TTTGTAATTTTTACTCGATTTGGTGTATTCATTTTGTTAAAATTAAACCG
AATCAACTGAACTGAACTTAATCTAAATTCAATTTGGATTTAAAACAATC
TCAATGAAATCGCAAGCGCAAACAACAACAAAAGAACCGACAAAAAAAAA
AAAAAAAAA

GH25737.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10803-RA 2919 CG10803-RA 46..2651 1..2606 13030 100 Plus
CG10803.a 4836 CG10803.a 46..2651 1..2606 13030 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 3379842..3381059 360..1577 6015 99.6 Plus
chrX 22417052 chrX 3381604..3382244 1951..2591 3160 99.5 Plus
chrX 22417052 chrX 3379189..3379547 1..359 1705 98.3 Plus
chrX 22417052 chrX 3381126..3381318 1578..1770 965 100 Plus
chrX 22417052 chrX 3381368..3381551 1767..1950 920 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:07:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3486313..3487530 360..1577 6090 100 Plus
X 23542271 X 3488075..3488730 1951..2606 3280 100 Plus
X 23542271 X 3485663..3486021 1..359 1795 100 Plus
X 23542271 X 3487597..3487789 1578..1770 965 100 Plus
X 23542271 X 3487839..3488022 1767..1950 920 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 3494411..3495628 360..1577 6090 100 Plus
X 23527363 X 3496173..3496828 1951..2606 3280 100 Plus
X 23527363 X 3493761..3494119 1..359 1795 100 Plus
X 23527363 X 3495695..3495887 1578..1770 965 100 Plus
X 23527363 X 3495937..3496120 1767..1950 920 100 Plus
Blast to na_te.dros performed on 2019-03-16 15:08:06 has no hits.

GH25737.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:09:10 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 3379189..3379547 1..359 98 -> Plus
chrX 3379842..3381059 360..1577 99 -> Plus
chrX 3381126..3381316 1578..1768 100 -> Plus
chrX 3381370..3381551 1769..1950 100 -> Plus
chrX 3381604..3382220 1951..2567 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:56:18 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 1..1914 179..2092 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:05:08 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 1..1914 179..2092 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:04:33 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 1..1914 179..2092 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:35:50 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 1..1914 179..2092 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:36:22 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 1..1914 179..2092 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:54:30 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 11..2601 1..2591 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:05:08 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 11..2601 1..2591 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:33 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 14..2604 1..2591 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:35:50 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 11..2601 1..2591 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:36:22 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
CG10803-RA 14..2604 1..2591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:10 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
X 3487597..3487787 1578..1768 100 -> Plus
X 3487841..3488022 1769..1950 100 -> Plus
X 3485663..3486021 1..359 100 -> Plus
X 3486313..3487530 360..1577 100 -> Plus
X 3488075..3488715 1951..2591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:10 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
X 3487597..3487787 1578..1768 100 -> Plus
X 3487841..3488022 1769..1950 100 -> Plus
X 3485663..3486021 1..359 100 -> Plus
X 3486313..3487530 360..1577 100 -> Plus
X 3488075..3488715 1951..2591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:10 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
X 3487597..3487787 1578..1768 100 -> Plus
X 3487841..3488022 1769..1950 100 -> Plus
X 3485663..3486021 1..359 100 -> Plus
X 3486313..3487530 360..1577 100 -> Plus
X 3488075..3488715 1951..2591 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:33 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3379696..3380054 1..359 100 -> Plus
arm_X 3380346..3381563 360..1577 100 -> Plus
arm_X 3381630..3381820 1578..1768 100 -> Plus
arm_X 3381874..3382055 1769..1950 100 -> Plus
arm_X 3382108..3382748 1951..2591 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:12:52 Download gff for GH25737.complete
Subject Subject Range Query Range Percent Splice Strand
X 3493761..3494119 1..359 100 -> Plus
X 3494411..3495628 360..1577 100 -> Plus
X 3495695..3495885 1578..1768 100 -> Plus
X 3495939..3496120 1769..1950 100 -> Plus
X 3496173..3496813 1951..2591 100   Plus

GH25737.pep Sequence

Translation from 178 to 2091

> GH25737.pep
MKKGKGSSSLGSKESSGRPSTAVLVFKKCARFADSSESAEIQQDGKEQLP
ERQDSLDAKESAGMEKEAISNQPLKDEPSKDEPNQSEGTAISTIPAIDKL
RRFCFIGSTDEPVYTTPALDLVVENNFASLKELCSQVSEDELVECLLSVL
GSEPNEEQPPRPDEPLLILAVFFTTCEDEKKRNAVRNRFTDLITSESDLL
LFVQLVKRVQKLLERKTPFNRTVRKAVLNWYGTKSLDRLLHFWSIGDGNR
WPAHRDLLYRLHFRHANFLPEIIAALRLLSSSPKELSQWPDFLTPLTSFR
ETIEGVVKLRLLTDPEQAISIVKKLSLSWEHVPFHLLHDPRLAHFLIPHM
SYEQLLQKWPRLSRLNSRVRPFAEQLLDKKKLKASNVPPVRLLLEDMRLR
KPKKVVNQLVLPSSLKNKNTFKFQCATTSFQKASFLHSVYEISFGLNKAL
GRRLHITLNLEQAYLGKYLSGPCRSLKYLDALVALGFGYFRSDRKVTVEF
WHDRSGKLKALPWTNEMSVSEAKTCCENQKVGKVRQSLNEILFRALLDMQ
NTFDVFLVLVPGAARGNPENNSKCLAALMDKYREKRNSNAKFIMVSLRQR
QRSMIYSSGRNENLLELCSLDKHTPRLINAFVRNKFY*

GH25737.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22639-PA 664 GF22639-PA 102..664 77..637 1939 66.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18658-PA 656 GG18658-PA 1..656 1..637 2161 65.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24936-PA 593 GH24936-PA 84..593 112..637 1244 48.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10803-PA 637 CG10803-PA 1..637 1..637 3282 100 Plus
CG10803-PE 617 CG10803-PE 1..617 1..637 3152 96.9 Plus
CG10803-PD 574 CG10803-PD 1..574 64..637 2972 100 Plus
CG10803-PC 574 CG10803-PC 1..574 64..637 2972 100 Plus
CG10803-PB 574 CG10803-PB 1..574 64..637 2972 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15703-PA 534 GI15703-PA 8..534 96..637 1415 50.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15941-PA 673 GL15941-PA 93..673 47..637 1332 45.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10568-PA 648 GA10568-PA 42..648 15..637 1354 45.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12294-PA 236 GM12294-PA 1..232 1..232 1048 86.2 Plus
Dsec\GM12295-PA 170 GM12295-PA 4..170 428..637 662 65.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16643-PA 652 GD16643-PA 1..652 1..637 2698 80.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15233-PA 541 GJ15233-PA 15..541 96..637 1399 49.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16253-PA 545 GK16253-PA 8..544 93..636 1435 51.8 Plus
Dwil\GK23472-PA 121 GK23472-PA 1..120 517..636 382 61.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16302-PA 619 GE16302-PA 1..619 1..637 2592 79.2 Plus

GH25737.hyp Sequence

Translation from 178 to 2091

> GH25737.hyp
MKKGKGSSSLGSKESSGRPSTAVLVFKKCARFADSSESAEIQQDGKEQLP
ERQDSLDAKESAGMEKEAISNQPLKDEPSKDEPNQSEGTAISTIPAIDKL
RRFCFIGSTDEPVYTTPALDLVVENNFASLKELCSQVSEDELVECLLSVL
GSEPNEEQPPRPDEPLLILAVFFTTCEDEKKRNAVRNRFTDLITSESDLL
LFVQLVKRVQKLLERKTPFNRTVRKAVLNWYGTKSLDRLLHFWSIGDGNR
WPAHRDLLYRLHFRHANFLPEIIAALRLLSSSPKELSQWPDFLTPLTSFR
ETIEGVVKLRLLTDPEQAISIVKKLSLSWEHVPFHLLHDPRLAHFLIPHM
SYEQLLQKWPRLSRLNSRVRPFAEQLLDKKKLKASNVPPVRLLLEDMRLR
KPKKVVNQLVLPSSLKNKNTFKFQCATTSFQKASFLHSVYEISFGLNKAL
GRRLHITLNLEQAYLGKYLSGPCRSLKYLDALVALGFGYFRSDRKVTVEF
WHDRSGKLKALPWTNEMSVSEAKTCCENQKVGKVRQSLNEILFRALLDMQ
NTFDVFLVLVPGAARGNPENNSKCLAALMDKYREKRNSNAKFIMVSLRQR
QRSMIYSSGRNENLLELCSLDKHTPRLINAFVRNKFY*

GH25737.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10803-PA 637 CG10803-PA 1..637 1..637 3282 100 Plus
CG10803-PE 617 CG10803-PE 1..617 1..637 3152 96.9 Plus
CG10803-PD 574 CG10803-PD 1..574 64..637 2972 100 Plus
CG10803-PC 574 CG10803-PC 1..574 64..637 2972 100 Plus
CG10803-PB 574 CG10803-PB 1..574 64..637 2972 100 Plus