BDGP Sequence Production Resources |
Search the DGRC for GH25848
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 258 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6931-RA |
Protein status: | GH25848.pep: gold |
Preliminary Size: | 1281 |
Sequenced Size: | 1104 |
Gene | Date | Evidence |
---|---|---|
CG6931 | 2001-01-01 | Release 2 assignment |
CG6931 | 2001-11-09 | Blastp of sequenced clone |
CG6931 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6931 | 2008-04-29 | Release 5.5 accounting |
CG6931 | 2008-08-15 | Release 5.9 accounting |
CG6931 | 2008-12-18 | 5.12 accounting |
1104 bp (1104 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069203
> GH25848.complete AATTTAACAGAATTTATTCTGAGGCATAAATTATTTGATGATGAACAAGA AGCTCTCGCCAGAGGATGCATTTTATGAAAATTTGACCCTCGGTCTGATA AGGACGCTATCCAATGTGCCAAGGGTATGTAATGTGACGTTGGAGCGACG ACAACCTCTGAATGCCTGCCAGTTGGTGAATTGGGAGCAGAGGCACTGCG TCTACCTCCCGGAAGATATGAAGAAGTTCTACCTATCTTCTGATGGCTTT ATCTTAAACTGGAGCTACCAATATGCTCCCAACGATATTAGGCGCGTGGG TCACATTCACTTTCCGCACTTGCTGCAAGTGACCCTTTTGCGGGAGAACA TAGAAACCACATCGAGCCACTCCAGCAATTCGACGGCTGTGCCCAATAGC AACTCGGATGTTGTGGGAGCAGCCGGGAGCTCTCAATCCCTTCCAGCACC TATTGCCACCGGAAAAGACAAGTGGGGCAATGCCACGCCTATTATAACGG CCAAATCGAAAATATTTGAGATCAACAACGTAAACGAGGTGGCCAAGGTG TGTATGCTGTACGAATCTACCAGTTCCAACAATCCCAAGTTCTATCTGCT AGAGCTGAGCACCCTGAGCTGGCAGTTTTTGGCGGACACCTTTAGTGAAT ACCTTCGGATGGCCATCGCGCACTTGGGACTGCCGTACTGGGAGCTGTGC TTCTCCACCTGTGGCCTGCCCTCTTGGACAGAGCAGCTGTTTCTTTTGCT AGCACCTCATCTTCTCGAGGAGCACGAGCCACGACGTGGACGAGTACTGA ATCCCGCTTGCGAGCATCCGTACAATATCATTGATCCGAACATTTTTCGG GGTAAACCAAAAAGCGTGGCAAAAGCAACGGCTACCAGCACCAAACAAAA TCATAAATAGTGACTTTCTGTAGAAAAGTAAACAATTTATTTATGAGGGT ACATAAATGCCAAAAAACAATGAAATGAAAACGTGCAAGGGAAATTCCTG AGGACTGGTTAATATATAAATCAATAACGTTCGCTCTCAACGGCGGATGT TTACGTTTCAAACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11982293..11982812 | 546..1065 | 2600 | 100 | Plus |
chr3L | 24539361 | chr3L | 11981954..11982229 | 279..554 | 1380 | 100 | Plus |
chr3L | 24539361 | chr3L | 11981729..11981896 | 111..278 | 840 | 100 | Plus |
chr3L | 24539361 | chr3L | 11981558..11981667 | 1..110 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11991481..11992000 | 546..1065 | 2600 | 100 | Plus |
3L | 28110227 | 3L | 11991142..11991417 | 279..554 | 1380 | 100 | Plus |
3L | 28110227 | 3L | 11990917..11991084 | 111..278 | 840 | 100 | Plus |
3L | 28110227 | 3L | 11990746..11990855 | 1..110 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11984581..11985100 | 546..1065 | 2600 | 100 | Plus |
3L | 28103327 | 3L | 11984242..11984517 | 279..554 | 1380 | 100 | Plus |
3L | 28103327 | 3L | 11984017..11984184 | 111..278 | 840 | 100 | Plus |
3L | 28103327 | 3L | 11983846..11983955 | 1..110 | 550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11981558..11981667 | 1..110 | 100 | -> | Plus |
chr3L | 11981729..11981896 | 111..278 | 100 | -> | Plus |
chr3L | 11981954..11982222 | 279..547 | 100 | -> | Plus |
chr3L | 11982295..11982812 | 548..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 1..873 | 38..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 1..873 | 38..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 1..873 | 38..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 1..873 | 38..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 1..873 | 38..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 3..1067 | 1..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 3..1067 | 1..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 11..1075 | 1..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 3..1067 | 1..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6931-RA | 11..1075 | 1..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11990746..11990855 | 1..110 | 100 | -> | Plus |
3L | 11990917..11991084 | 111..278 | 100 | -> | Plus |
3L | 11991142..11991410 | 279..547 | 100 | -> | Plus |
3L | 11991483..11992000 | 548..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11990746..11990855 | 1..110 | 100 | -> | Plus |
3L | 11990917..11991084 | 111..278 | 100 | -> | Plus |
3L | 11991142..11991410 | 279..547 | 100 | -> | Plus |
3L | 11991483..11992000 | 548..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11990746..11990855 | 1..110 | 100 | -> | Plus |
3L | 11990917..11991084 | 111..278 | 100 | -> | Plus |
3L | 11991142..11991410 | 279..547 | 100 | -> | Plus |
3L | 11991483..11992000 | 548..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11983846..11983955 | 1..110 | 100 | -> | Plus |
arm_3L | 11984017..11984184 | 111..278 | 100 | -> | Plus |
arm_3L | 11984242..11984510 | 279..547 | 100 | -> | Plus |
arm_3L | 11984583..11985100 | 548..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11984242..11984510 | 279..547 | 100 | -> | Plus |
3L | 11984583..11985100 | 548..1065 | 100 | Plus | |
3L | 11983846..11983955 | 1..110 | 100 | -> | Plus |
3L | 11984017..11984184 | 111..278 | 100 | -> | Plus |
Translation from 37 to 909
> GH25848.hyp MMNKKLSPEDAFYENLTLGLIRTLSNVPRVCNVTLERRQPLNACQLVNWE QRHCVYLPEDMKKFYLSSDGFILNWSYQYAPNDIRRVGHIHFPHLLQVTL LRENIETTSSHSSNSTAVPNSNSDVVGAAGSSQSLPAPIATGKDKWGNAT PIITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLAD TFSEYLRMAIAHLGLPYWELCFSTCGLPSWTEQLFLLLAPHLLEEHEPRR GRVLNPACEHPYNIIDPNIFRGKPKSVAKATATSTKQNHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6931-PA | 290 | CG6931-PA | 1..290 | 1..290 | 1546 | 100 | Plus |
Translation from 37 to 909
> GH25848.pep MMNKKLSPEDAFYENLTLGLIRTLSNVPRVCNVTLERRQPLNACQLVNWE QRHCVYLPEDMKKFYLSSDGFILNWSYQYAPNDIRRVGHIHFPHLLQVTL LRENIETTSSHSSNSTAVPNSNSDVVGAAGSSQSLPAPIATGKDKWGNAT PIITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLAD TFSEYLRMAIAHLGLPYWELCFSTCGLPSWTEQLFLLLAPHLLEEHEPRR GRVLNPACEHPYNIIDPNIFRGKPKSVAKATATSTKQNHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25309-PA | 287 | GF25309-PA | 1..287 | 2..290 | 1256 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15550-PA | 289 | GG15550-PA | 1..289 | 1..290 | 1520 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17133-PA | 279 | GH17133-PA | 1..273 | 2..286 | 1127 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6931-PA | 290 | CG6931-PA | 1..290 | 1..290 | 1546 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11742-PA | 278 | GI11742-PA | 1..278 | 2..290 | 1080 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25115-PA | 297 | GL25115-PA | 1..278 | 2..272 | 1190 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19963-PA | 297 | GA19963-PA | 1..278 | 2..272 | 1186 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25318-PA | 291 | GM25318-PA | 1..289 | 1..289 | 1532 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14350-PA | 291 | GD14350-PA | 1..289 | 1..289 | 1522 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11414-PA | 275 | GJ11414-PA | 1..275 | 2..290 | 1159 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16935-PA | 283 | GK16935-PA | 1..266 | 2..277 | 1168 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21873-PA | 291 | GE21873-PA | 1..289 | 1..289 | 1540 | 98.6 | Plus |