BDGP Sequence Production Resources |
Search the DGRC for GH25855
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 258 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | Cct2-RA |
Protein status: | GH25855.pep: gold |
Preliminary Size: | 1716 |
Sequenced Size: | 1714 |
Gene | Date | Evidence |
---|---|---|
CG18330 | 2001-01-01 | Release 2 assignment |
CG18330 | 2001-09-19 | Blastp of sequenced clone |
CG18330 | 2003-01-01 | Sim4 clustering to Release 3 |
Cct2 | 2008-04-29 | Release 5.5 accounting |
Cct2 | 2008-08-15 | Release 5.9 accounting |
Cct2 | 2008-12-18 | 5.12 accounting |
1714 bp (1714 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058458
> GH25855.complete CCTGATCGAATCGGCGGACCCGTGCCAAGTCAGGCGACCGACCCGTTGCT TCCTATTTGCTTGCGCCGCAATTTGCGGCAATTGAAGATGAGCGATGAAT CCGAGCCAGAGACTTGGGCCTGAGACTGCTAGAGCCGCCTCCAAGTCGTG TGCCTCGCCAGCCGCTGGACTCAATTGTATTGATTCGCCACCAGTTGCCG CCAATTTATTCTGATCGCAGCTAGTGCGCAGTTGGGGACATCTCTCGCTC AAAGTCTCGGACTCAATCCTCGACAGAGTAGACCTAGAGGGTTATGCCGG TTCCGTCTCAATTTATGTAATCAGTCGTCCGGATGAAATCCCCTTGAGCG GACCACTAGTGCTGTACTTAGTTGTGTATACTCGTACATATATTTTTATA AGCAATGGACAGAATGCCGAAAGAGGACGACGAATCTCCAGTGTCGACGG CTCCTGCCACACCGACATCGCCGATGGAGTTTAAGATGCTACCGCTCTTT ATGGACTTTGAGGATTTTAGCATTTGCCAGCCTGCTCCTTTCTCGTACGA TGACAAGGCCATGCTGGAGCTCGAGAGATGCGACTACACACAGAGGATCA CCTATCATATGGCCAGAGCTGGGAAGACGACGCGCAGGGTGCGGGTCTAT GCAGATGGCATATATGATCTGTTCCACCAAGGCCATGCCCGCCAACTCAT GCAGGCCAAGAATGTGTTTCCCAACGTCTATCTCATCGTCGGCGTGTGCA ATGATGAGCTGACCCTCAGGATGAAGGGACGCACGGTTATGAATGGATTC GAGCGCTACGAGGCGGTGCGCCACTGCCGCTACGTGGATGAGATCGTTCC GAATGCTCCGTGGACGCTAAATGAGGAGTTTATCGAGGAGCACAAAATCG ACTTTGTGGCCCACGATGACATACCCTATGGAGCTGGCGGAGTCAACGAC ATATATGCTCCACTCAAAGCGAAGGGAATGTTTGTGGCCACGGAACGCAC TGAGGGCGTGTCCACGTCGGACATTGTGGCCCGAATCGTGAAGGACTACG ATGTATATGTGCGCAGGAACCTGGCCAGAGGCTACTCAGCCAAGGAGCTC AACGTCTCCTTTCTCTCCGAGAAGAAATTCCGTCTGCAGAACAAGATGGA CGAGCTGAAGACACGAGGCAAGCGGGAGCTGACCAAAGTCAAGGTTGACA TCATCACCAAGTGGGAGGAGAAGTCGCGCGAGTTCATCGATGCCTTCCTG CTCCTGTTCGGCCGGGAGCGGCTTAACACCTTCTGGAACGAGTCCAAGGG CCGAATCATTCAGGCACTCAGCCCACCAGGCAGTCCGAATGGCTCCGTAA ACGGTGACGATCCAGACGCAACAGACGACTTAGACTCTGAGGATGAGTAC ATGGAGCTGCCACCAGACTACGGGTCTGGTAGTTGCGTATCCCTTAGTCG AAAACAAAAGCGCCCTGATAAGGTGAATGCCTCAGCAAACCTCAATTACT CGGAGCAACCAGAGCATAAGGATGTCGTAGACGAGCGACGCAGCGACTAA AGACGAATTTGGCCTCTTCCTATCAATTAAAACATAAATAAATATGTTTG AAGTTTAATGGAACAGCGCAGTAGGCACTTTTATACATATTTAAAAGAGC TACCAGAAAAAGTATGCGCTTAAAATACATTCCGATAAATTTCAGTTAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cct2-RA | 1707 | Cct2-RA | 1..1700 | 1..1700 | 8500 | 100 | Plus |
Cct1.d | 1764 | Cct1.d | 497..819 | 946..1268 | 940 | 86 | Plus |
Cct1-RC | 2339 | Cct1-RC | 1072..1394 | 946..1268 | 940 | 86 | Plus |
Cct1.d | 1764 | Cct1.d | 73..481 | 522..930 | 875 | 80.9 | Plus |
Cct1-RC | 2339 | Cct1-RC | 648..1056 | 522..930 | 875 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1553966..1554822 | 841..1697 | 4120 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 1553000..1553517 | 1..518 | 2545 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 1553585..1553908 | 519..842 | 1575 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 1551361..1551877 | 841..1357 | 1130 | 81.2 | Plus |
chr3L | 24539361 | chr3L | 1550979..1551299 | 522..842 | 720 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1554459..1555318 | 841..1700 | 4300 | 100 | Plus |
3L | 28110227 | 3L | 1553493..1554010 | 1..518 | 2590 | 100 | Plus |
3L | 28110227 | 3L | 1554078..1554401 | 519..842 | 1620 | 100 | Plus |
3L | 28110227 | 3L | 1551863..1552379 | 841..1357 | 1085 | 80.7 | Plus |
3L | 28110227 | 3L | 1551481..1551801 | 522..842 | 720 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1554459..1555318 | 841..1700 | 4300 | 100 | Plus |
3L | 28103327 | 3L | 1553493..1554010 | 1..518 | 2590 | 100 | Plus |
3L | 28103327 | 3L | 1554078..1554401 | 519..842 | 1620 | 100 | Plus |
3L | 28103327 | 3L | 1551968..1552290 | 946..1268 | 940 | 86 | Plus |
3L | 28103327 | 3L | 1551481..1551801 | 522..842 | 720 | 81.6 | Plus |
3L | 28103327 | 3L | 1551863..1551952 | 841..930 | 165 | 78.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1553000..1553517 | 1..518 | 99 | -> | Plus |
chr3L | 1553585..1553908 | 519..842 | 99 | -> | Plus |
chr3L | 1553968..1554822 | 843..1697 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1146 | 405..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1146 | 405..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1146 | 405..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1146 | 405..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1146 | 405..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1697 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1697 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1697 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1697 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cct2-RA | 1..1697 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1553493..1554010 | 1..518 | 100 | -> | Plus |
3L | 1554078..1554401 | 519..842 | 100 | -> | Plus |
3L | 1554461..1555315 | 843..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1553493..1554010 | 1..518 | 100 | -> | Plus |
3L | 1554078..1554401 | 519..842 | 100 | -> | Plus |
3L | 1554461..1555315 | 843..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1553493..1554010 | 1..518 | 100 | -> | Plus |
3L | 1554078..1554401 | 519..842 | 100 | -> | Plus |
3L | 1554461..1555315 | 843..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1553493..1554010 | 1..518 | 100 | -> | Plus |
arm_3L | 1554078..1554401 | 519..842 | 100 | -> | Plus |
arm_3L | 1554461..1555315 | 843..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1553493..1554010 | 1..518 | 100 | -> | Plus |
3L | 1554078..1554401 | 519..842 | 100 | -> | Plus |
3L | 1554461..1555315 | 843..1697 | 100 | Plus |
Translation from 404 to 1549
> GH25855.pep MDRMPKEDDESPVSTAPATPTSPMEFKMLPLFMDFEDFSICQPAPFSYDD KAMLELERCDYTQRITYHMARAGKTTRRVRVYADGIYDLFHQGHARQLMQ AKNVFPNVYLIVGVCNDELTLRMKGRTVMNGFERYEAVRHCRYVDEIVPN APWTLNEEFIEEHKIDFVAHDDIPYGAGGVNDIYAPLKAKGMFVATERTE GVSTSDIVARIVKDYDVYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDE LKTRGKRELTKVKVDIITKWEEKSREFIDAFLLLFGRERLNTFWNESKGR IIQALSPPGSPNGSVNGDDPDATDDLDSEDEYMELPPDYGSGSCVSLSRK QKRPDKVNASANLNYSEQPEHKDVVDERRSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24774-PA | 389 | GF24774-PA | 1..357 | 1..356 | 1631 | 85.2 | Plus |
Dana\GF24772-PA | 526 | GF24772-PA | 150..477 | 10..339 | 1395 | 77.9 | Plus |
Dana\GF15564-PA | 393 | GF15564-PA | 31..164 | 77..212 | 240 | 40.9 | Plus |
Dana\GF15564-PA | 393 | GF15564-PA | 227..391 | 81..247 | 216 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14798-PA | 368 | GG14798-PA | 1..368 | 4..381 | 1775 | 87.8 | Plus |
Dere\GG14797-PA | 521 | GG14797-PA | 165..521 | 37..381 | 1391 | 74.2 | Plus |
Dere\GG23821-PA | 384 | GG23821-PA | 19..155 | 74..212 | 234 | 40 | Plus |
Dere\GG23821-PA | 384 | GG23821-PA | 218..363 | 81..225 | 209 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14503-PA | 571 | GH14503-PA | 220..532 | 39..353 | 1372 | 81.9 | Plus |
Dgri\GH11091-PA | 385 | GH11091-PA | 17..156 | 71..212 | 233 | 39.2 | Plus |
Dgri\GH11091-PA | 385 | GH11091-PA | 219..364 | 81..225 | 201 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pcyt2-PA | 381 | CG18330-PA | 1..381 | 1..381 | 2010 | 100 | Plus |
Pcyt1-PF | 526 | CG1049-PF | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pcyt1-PE | 526 | CG1049-PE | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pcyt1-PC | 526 | CG1049-PC | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pcyt1-PB | 526 | CG1049-PB | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pcyt1-PD | 526 | CG1049-PD | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pcyt1-PA | 526 | CG1049-PA | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Pect-PB | 393 | CG5547-PB | 16..174 | 74..234 | 229 | 36.4 | Plus |
Pect-PE | 371 | CG5547-PE | 16..152 | 74..212 | 227 | 39.3 | Plus |
Pect-PC | 374 | CG5547-PC | 16..152 | 74..212 | 227 | 39.3 | Plus |
Pect-PD | 381 | CG5547-PD | 16..152 | 74..212 | 227 | 39.3 | Plus |
Pect-PB | 393 | CG5547-PB | 227..372 | 81..225 | 210 | 37.8 | Plus |
Pect-PE | 371 | CG5547-PE | 205..350 | 81..225 | 210 | 37.8 | Plus |
Pect-PC | 374 | CG5547-PC | 208..353 | 81..225 | 210 | 37.8 | Plus |
Pect-PD | 381 | CG5547-PD | 215..360 | 81..225 | 210 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13279-PA | 575 | GI13279-PA | 195..532 | 16..353 | 1441 | 80.6 | Plus |
Dmoj\GI17607-PA | 394 | GI17607-PA | 26..165 | 71..212 | 236 | 39.2 | Plus |
Dmoj\GI17607-PA | 394 | GI17607-PA | 228..373 | 81..225 | 204 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24808-PA | 531 | GL24808-PA | 169..454 | 32..316 | 1341 | 84.6 | Plus |
Dper\GL24809-PA | 417 | GL24809-PA | 56..360 | 26..334 | 1302 | 78.3 | Plus |
Dper\GL24617-PA | 357 | GL24617-PA | 26..293 | 40..310 | 1122 | 75.7 | Plus |
Dper\GL26305-PA | 395 | GL26305-PA | 35..166 | 79..212 | 225 | 40 | Plus |
Dper\GL26305-PA | 395 | GL26305-PA | 229..374 | 81..225 | 203 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10348-PA | 531 | GA10348-PA | 169..454 | 32..316 | 1341 | 84.6 | Plus |
Dpse\GA23519-PA | 417 | GA23519-PA | 56..360 | 26..334 | 1294 | 78 | Plus |
Dpse\GA23364-PA | 391 | GA23364-PA | 55..329 | 33..310 | 1127 | 73.8 | Plus |
Dpse\GA28810-PA | 395 | GA28810-PA | 35..166 | 79..212 | 225 | 40 | Plus |
Dpse\GA28810-PA | 395 | GA28810-PA | 229..374 | 81..225 | 203 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14420-PA | 380 | GM14420-PA | 1..380 | 1..381 | 1963 | 96.6 | Plus |
Dsec\GM14419-PA | 524 | GM14419-PA | 157..463 | 31..335 | 1394 | 82.1 | Plus |
Dsec\GM10235-PA | 381 | GM10235-PA | 16..152 | 74..212 | 228 | 39.3 | Plus |
Dsec\GM10235-PA | 381 | GM10235-PA | 215..360 | 81..225 | 213 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13624-PA | 381 | GD13624-PA | 1..381 | 1..381 | 1967 | 96.1 | Plus |
Dsim\GD13623-PA | 524 | GD13623-PA | 157..463 | 31..335 | 1394 | 82.1 | Plus |
Dsim\GD23872-PA | 381 | GD23872-PA | 16..152 | 74..212 | 228 | 39.3 | Plus |
Dsim\GD23872-PA | 381 | GD23872-PA | 215..360 | 81..225 | 213 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12047-PA | 368 | GJ12047-PA | 2..329 | 24..353 | 1420 | 80.6 | Plus |
Dvir\GJ17952-PA | 415 | GJ17952-PA | 249..394 | 81..225 | 205 | 36.5 | Plus |
Dvir\GJ17952-PA | 415 | GJ17952-PA | 50..173 | 87..212 | 205 | 39.4 | Plus |
Dvir\GJ14914-PA | 351 | GJ14914-PA | 185..330 | 81..225 | 203 | 36.5 | Plus |
Dvir\GJ14912-PA | 167 | GJ14912-PA | 1..146 | 81..225 | 201 | 36.5 | Plus |
Dvir\GJ14914-PA | 351 | GJ14914-PA | 1..122 | 89..212 | 190 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12565-PA | 560 | GK12565-PA | 193..496 | 39..339 | 1378 | 83.9 | Plus |
Dwil\GK14544-PA | 393 | GK14544-PA | 33..176 | 79..224 | 234 | 38.8 | Plus |
Dwil\GK14544-PA | 393 | GK14544-PA | 227..372 | 81..225 | 205 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21160-PA | 380 | GE21160-PA | 1..380 | 1..381 | 1836 | 89.2 | Plus |
Dyak\GE21159-PA | 520 | GE21159-PA | 157..520 | 31..381 | 1399 | 74.7 | Plus |
Dyak\Pect-PA | 384 | GE18624-PA | 15..155 | 70..212 | 242 | 39.6 | Plus |
Dyak\Pect-PA | 384 | GE18624-PA | 218..363 | 81..225 | 213 | 37.8 | Plus |
Translation from 404 to 1549
> GH25855.hyp MDRMPKEDDESPVSTAPATPTSPMEFKMLPLFMDFEDFSICQPAPFSYDD KAMLELERCDYTQRITYHMARAGKTTRRVRVYADGIYDLFHQGHARQLMQ AKNVFPNVYLIVGVCNDELTLRMKGRTVMNGFERYEAVRHCRYVDEIVPN APWTLNEEFIEEHKIDFVAHDDIPYGAGGVNDIYAPLKAKGMFVATERTE GVSTSDIVARIVKDYDVYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDE LKTRGKRELTKVKVDIITKWEEKSREFIDAFLLLFGRERLNTFWNESKGR IIQALSPPGSPNGSVNGDDPDATDDLDSEDEYMELPPDYGSGSCVSLSRK QKRPDKVNASANLNYSEQPEHKDVVDERRSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cct2-PA | 381 | CG18330-PA | 1..381 | 1..381 | 2010 | 100 | Plus |
Cct1-PF | 526 | CG1049-PF | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Cct1-PE | 526 | CG1049-PE | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Cct1-PC | 526 | CG1049-PC | 158..513 | 32..377 | 1360 | 75.3 | Plus |
Cct1-PB | 526 | CG1049-PB | 158..513 | 32..377 | 1360 | 75.3 | Plus |