BDGP Sequence Production Resources |
Search the DGRC for GH25868
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 258 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7011-RA |
Protein status: | GH25868.pep: gold |
Preliminary Size: | 1523 |
Sequenced Size: | 1330 |
Gene | Date | Evidence |
---|---|---|
CG7011 | 2001-01-01 | Release 2 assignment |
CG7011 | 2001-10-10 | Blastp of sequenced clone |
CG7011 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7011 | 2008-04-29 | Release 5.5 accounting |
CG7011 | 2008-08-15 | Release 5.9 accounting |
CG7011 | 2008-12-18 | 5.12 accounting |
1330 bp (1330 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060788
> GH25868.complete GCAACGCCAATTTCAACACGTCACCTGTCTTGTGCAAAAACGATGTAATA TTTATTGTTTACGTCTGCATTTCGTCTGTTTTGTTCCTTTTACGTGTTCA CGATGAAGTTCGCCGACGTGCTGCGTCGCCTGGACGCCTATCCCCGCACA CTGGATGACTTCAGCGTTCGCACAGTGGGCGGCGCCGCAGTTACAATTAT CAGTACCAGCATCATAAGCCTACTGATCTTCCTCGAGGTCCTCAACTACA TGCAGCCAACCCTAAATGAAGAGCTCTTCGTGGACACCACTCGTGATCAC AAGTTGAGAATAAATCTGGACGTGACACTGCATAATCTGGCGTGCAACTA CATCTCATTGGACGCAATGGATTCATCTGGCGACACACACTTGAGGGTGG ACCACGACGTCTTTAAGCACCGGCTGGATCTCAATGGCGAGCCCCTCAAG GAGACGCCCATCAAGGAAATCGTTGCAGTTTCGCCGCCCAATAAGAATGT CACTTGCGGCAGTTGTTACGGAGCGGAGCACAATGCTACTCACTGCTGCA ACACGTGCGAGGATGTTCTCGACGCCTACCGGCTGCGCAAATGGACCGTG GCCGTGGACAAGATCGAGCAATGTAAGGGCAAGTACAAACGCAGCGACGA GGACGCCTTCAAGGAGGGCTGTCGCATCCAGGGTCACCTGGAAGTGAATC GAATGGCCGGCAGCTTTCACTTTGCGCCCGGCAAGAGCTTCTCCATCCGC CAGTTCCACATCCATGACTTTCAGTTCAGCAATGTGAAGCTATCGCACAC AATCAATCACCTATCGTTCGGCGAGAAGATAGAGTTCGCCAAGACGCATC CCTTGGATGGACTACGAGTCGACGTGGCTGAAACCAAAAGTGAAATGTTC AATTACTATTTAAAAATTGTTCCCACATTATATATGCGAGGAAACAGCGA CGGCGAGCCCATATACACGAATCAATTCTCCGTCACGCGATACCGAAAAG ATCTTTCAGATCGCGAGCGCGGAATGCCGGGGATATTCTTCAGCTACGAG CTCTCGCCACTGATGGTGAAATATGCGGAGAGACACAGCTCATTTGGCCA CTTCGCCACGAATTGCTGTTCCATCATCGGAGGCGTGTTCACGGTGGCCG GCATTCTCGCCGTGCTGCTGAACAACTCGTGGGAGGCCATTCAACGGAAA CTGGAAGTCGGCAAGCTCAGCTAACAACAATTCGAATCTCTTATGCAGCT TTACTACGCCTAACTCAATATACATTCGACAAATCTCCAAATAAAAGTGC TTAATTTTATAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15153080..15153434 | 542..188 | 1625 | 97.2 | Minus |
chr3L | 24539361 | chr3L | 15152593..15152930 | 880..543 | 1615 | 98.5 | Minus |
chr3L | 24539361 | chr3L | 15150969..15151195 | 1312..1086 | 1135 | 100 | Minus |
chr3L | 24539361 | chr3L | 15151254..15151466 | 1092..880 | 1050 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 15153501..15153690 | 190..1 | 935 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15162987..15163341 | 542..188 | 1775 | 100 | Minus |
3L | 28110227 | 3L | 15162500..15162837 | 880..543 | 1690 | 100 | Minus |
3L | 28110227 | 3L | 15160872..15161102 | 1316..1086 | 1155 | 100 | Minus |
3L | 28110227 | 3L | 15161161..15161373 | 1092..880 | 1050 | 99.5 | Minus |
3L | 28110227 | 3L | 15163408..15163597 | 190..1 | 950 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15156087..15156441 | 542..188 | 1775 | 100 | Minus |
3L | 28103327 | 3L | 15155600..15155937 | 880..543 | 1690 | 100 | Minus |
3L | 28103327 | 3L | 15153972..15154202 | 1316..1086 | 1155 | 100 | Minus |
3L | 28103327 | 3L | 15154261..15154473 | 1092..880 | 1050 | 99.5 | Minus |
3L | 28103327 | 3L | 15156508..15156697 | 190..1 | 950 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15150969..15151192 | 1089..1312 | 100 | <- | Minus |
chr3L | 15151258..15151465 | 881..1088 | 100 | <- | Minus |
chr3L | 15152593..15152930 | 543..880 | 98 | <- | Minus |
chr3L | 15153080..15153431 | 191..542 | 97 | <- | Minus |
chr3L | 15153501..15153690 | 1..190 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 1..1122 | 103..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 1..1122 | 103..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 1..1122 | 103..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 1..1122 | 103..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 1..1122 | 103..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 28..1339 | 1..1312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 28..1339 | 1..1312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 32..1343 | 1..1312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 28..1339 | 1..1312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7011-RA | 32..1343 | 1..1312 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15160876..15161099 | 1089..1312 | 100 | <- | Minus |
3L | 15161165..15161372 | 881..1088 | 100 | <- | Minus |
3L | 15162500..15162837 | 543..880 | 100 | <- | Minus |
3L | 15162987..15163338 | 191..542 | 100 | <- | Minus |
3L | 15163408..15163597 | 1..190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15160876..15161099 | 1089..1312 | 100 | <- | Minus |
3L | 15161165..15161372 | 881..1088 | 100 | <- | Minus |
3L | 15162500..15162837 | 543..880 | 100 | <- | Minus |
3L | 15162987..15163338 | 191..542 | 100 | <- | Minus |
3L | 15163408..15163597 | 1..190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15160876..15161099 | 1089..1312 | 100 | <- | Minus |
3L | 15161165..15161372 | 881..1088 | 100 | <- | Minus |
3L | 15162500..15162837 | 543..880 | 100 | <- | Minus |
3L | 15162987..15163338 | 191..542 | 100 | <- | Minus |
3L | 15163408..15163597 | 1..190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15153976..15154199 | 1089..1312 | 100 | <- | Minus |
arm_3L | 15155600..15155937 | 543..880 | 100 | <- | Minus |
arm_3L | 15154265..15154472 | 881..1088 | 100 | <- | Minus |
arm_3L | 15156087..15156438 | 191..542 | 100 | <- | Minus |
arm_3L | 15156508..15156697 | 1..190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15153976..15154199 | 1089..1312 | 100 | <- | Minus |
3L | 15154265..15154472 | 881..1088 | 100 | <- | Minus |
3L | 15155600..15155937 | 543..880 | 100 | <- | Minus |
3L | 15156087..15156438 | 191..542 | 100 | <- | Minus |
3L | 15156508..15156697 | 1..190 | 100 | Minus |
Translation from 102 to 1223
> GH25868.hyp MKFADVLRRLDAYPRTLDDFSVRTVGGAAVTIISTSIISLLIFLEVLNYM QPTLNEELFVDTTRDHKLRINLDVTLHNLACNYISLDAMDSSGDTHLRVD HDVFKHRLDLNGEPLKETPIKEIVAVSPPNKNVTCGSCYGAEHNATHCCN TCEDVLDAYRLRKWTVAVDKIEQCKGKYKRSDEDAFKEGCRIQGHLEVNR MAGSFHFAPGKSFSIRQFHIHDFQFSNVKLSHTINHLSFGEKIEFAKTHP LDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKD LSDRERGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAG ILAVLLNNSWEAIQRKLEVGKLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7011-PA | 373 | CG7011-PA | 1..373 | 1..373 | 1970 | 100 | Plus |
CG4293-PE | 439 | CG4293-PE | 19..364 | 8..356 | 210 | 23.2 | Plus |
CG4293-PD | 441 | CG4293-PD | 19..366 | 8..356 | 203 | 23.8 | Plus |
CG4293-PC | 441 | CG4293-PC | 19..366 | 8..356 | 203 | 23.8 | Plus |
CG4293-PA | 441 | CG4293-PA | 19..366 | 8..356 | 203 | 23.8 | Plus |
Translation from 102 to 1223
> GH25868.pep MKFADVLRRLDAYPRTLDDFSVRTVGGAAVTIISTSIISLLIFLEVLNYM QPTLNEELFVDTTRDHKLRINLDVTLHNLACNYISLDAMDSSGDTHLRVD HDVFKHRLDLNGEPLKETPIKEIVAVSPPNKNVTCGSCYGAEHNATHCCN TCEDVLDAYRLRKWTVAVDKIEQCKGKYKRSDEDAFKEGCRIQGHLEVNR MAGSFHFAPGKSFSIRQFHIHDFQFSNVKLSHTINHLSFGEKIEFAKTHP LDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKD LSDRERGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAG ILAVLLNNSWEAIQRKLEVGKLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10736-PA | 372 | GF10736-PA | 1..372 | 1..373 | 1897 | 93.8 | Plus |
Dana\GF22223-PA | 448 | GF22223-PA | 204..379 | 188..367 | 159 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13555-PA | 373 | GG13555-PA | 1..373 | 1..373 | 1983 | 98.1 | Plus |
Dere\GG12755-PA | 441 | GG12755-PA | 19..349 | 8..339 | 167 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17030-PA | 372 | GH17030-PA | 1..372 | 1..373 | 1825 | 92.8 | Plus |
Dgri\GH12601-PA | 434 | GH12601-PA | 190..345 | 184..339 | 152 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7011-PA | 373 | CG7011-PA | 1..373 | 1..373 | 1970 | 100 | Plus |
CG4293-PE | 439 | CG4293-PE | 19..364 | 8..356 | 210 | 23.2 | Plus |
CG4293-PD | 441 | CG4293-PD | 19..366 | 8..356 | 203 | 23.8 | Plus |
CG4293-PC | 441 | CG4293-PC | 19..366 | 8..356 | 203 | 23.8 | Plus |
CG4293-PA | 441 | CG4293-PA | 19..366 | 8..356 | 203 | 23.8 | Plus |
CG4293-PB | 441 | CG4293-PB | 19..366 | 8..356 | 203 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12235-PA | 372 | GI12235-PA | 1..372 | 1..373 | 1815 | 93 | Plus |
Dmoj\GI15435-PA | 433 | GI15435-PA | 19..370 | 8..367 | 171 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25735-PA | 313 | GL25735-PA | 1..272 | 1..272 | 1405 | 95.6 | Plus |
Dper\GL25746-PA | 51 | GL25746-PA | 1..51 | 323..373 | 256 | 92.2 | Plus |
Dper\GL20164-PA | 445 | GL20164-PA | 16..354 | 5..339 | 166 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20029-PA | 372 | GA20029-PA | 1..372 | 1..373 | 1927 | 95.4 | Plus |
Dpse\GA18088-PA | 445 | GA18088-PA | 16..354 | 5..339 | 167 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24497-PA | 373 | GM24497-PA | 1..373 | 1..373 | 2005 | 99.5 | Plus |
Dsec\GM19035-PA | 437 | GM19035-PA | 183..345 | 176..339 | 151 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12569-PA | 373 | GD12569-PA | 1..373 | 1..373 | 2005 | 99.5 | Plus |
Dsim\GD16474-PA | 441 | GD16474-PA | 19..349 | 8..339 | 158 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11466-PA | 372 | GJ11466-PA | 1..372 | 1..373 | 1884 | 92.8 | Plus |