BDGP Sequence Production Resources |
Search the DGRC for GH25972
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 259 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5718-RA |
Protein status: | GH25972.pep: gold |
Preliminary Size: | 2366 |
Sequenced Size: | 2166 |
Gene | Date | Evidence |
---|---|---|
CG5718 | 2001-01-01 | Release 2 assignment |
CG5718 | 2002-03-19 | Blastp of sequenced clone |
CG5718 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5718 | 2008-04-29 | Release 5.5 accounting |
CG5718 | 2008-08-15 | Release 5.9 accounting |
CG5718 | 2008-12-18 | 5.12 accounting |
2166 bp (2166 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094732
> GH25972.complete ACACTTAGATTTTAAAAGCGCAAAACTACATTTATTTCGTTAAATACTAC TGGACCGCCATTAAAAATGAATCGCCTGTTTCTCAAAAGGGCGGGACAGC ATGTAACCAGGAGCCTTCTTGGTCCAAATGGGAGTCGTCTGCTTCAAGTG TCCTGCGTTCGAGATGCCAGTTGCAAAGATGAGTACTCCTTGATAGACCA CAAGTTCGATGCGATTGTCATTGGTGCCGGTGGAGCTGGAATGCGGGCTG GATTTGGGCTGGCGGAGAAGGGTTTCCAAACGGCCATTATATCAAAGCTA TTTCCCACCCGATCTCACACGGTGGCTGCCCAGGGTGGTGTTAATGCCGC CCTCTCAAATATGGACAAGGACGACTGGAAGTACCACTTCTACGACACGG TGAAGGGCTCCGATTGGCTGGGTGATCAGAACGCGATCCATTACATGTGT CGGGAGGCGGAGAGGGCGGTCTGCGAACTGGACATGTACGGGATGCCCTT CTCGCGAAAGCCCGATGGCAAGATCTACCAGCGACCTTTTGGAGGTCAGA CCTTGGACTACGGAAAGGGCGGGGTGGCCAGAAGGGCGTGTGCATGTGCA GATCGCACGGGTCACGCCCTTATCCACACACTGTACGGACAAACGCTGAA GCACTCCGATTCTTGCCACTATTTTGTGGACTACTTCGTTCTGGATCTGA TCATGTCGCAGGGTGCATGTGTGGGATGTTTGGCTTGGAAACTGGATGAT GGCACCTTCCATCGGTTTTTGGCCAAAAATACGGTTGTTGCCGCCGGCGG TTGTGGTCGGGTGTACTTCTCCACGACCGCCGGACACACATGTACCGGCG ATGGCAATGCGTGGGTGTCTAGACAGGAGCTGCCGCTCATGGATATGGAA TTTGTGCAGTTTCATCCCACTGGCATCTACGGAGCCGGATGCCTTATCAC CGAGGGAGTTAGGGGCGAAGGCGGTTTCTTCTTGAACTGCAAGGGAGAAC GTTTCATGGAACGCTATGCTCCAAAGGCCAAGGATCTGGCGTCCAGAGAT GTGGTGGCGCGGGCCATGACCATGGAGGTTCTTGCTGGCAATGGTTGTGG TCCGCTCAAGGATCATGTGCACCTTCAGCTCCACCATATCGACGCCAAGA TCATCAAGCAACGATTGCCGGGCATTATGGTCACCGCCCGGATTTTTGCC AAAGTGGATGTGACCAAGGAACCAGTACCAGTGCTGCCAACTGTGCACTA CAACATGGGCGGCATACCAACGGATTACAAGGGTCGTGTGGTCACCATCG ATGAGAATGGCAAGGAACAGGTTGTCAAGGGACTGTACTCCTGCGGGGAA ACTTCCTGCGCCTCAGTACACGGAGCAAATCGATTGGGTGCCAACTCCCT GCTGGATCTGATCATCTTTGGCCGCGTCTGTGCTCTGGACATTGCCGCAA ACAACTGTCCGGGGGATAAGCCGCCCCAGGTGGAGGACAAAGCCACGGAG AAGTCGCTGGATAATTTTAAGCGCCTGCGCTGCGCCGACGGATGCATTCC CACTGCGGTGTTGAGAATGGAACTTCAGCGGACCATGACCAAACATGCGG CTGTTTTCCGGGAGGGAAAACTGCTCAAGGAGGGTCTGCTCAAAGTGGCC GAGTTATGTGAACAGTTCAAGGACATCAAGACAACCGATCGTACGATGGT GTGGAACTCCAACCTAGTTGAGACGCTAGAGCTGCAGAATATGCTAGCCA ATGCGGTGCACATCATTACAGCCATGGAAAATCGCAAGGAGTCGAGGGGC TCCCATGCTCGCGAGGATTTCAAGACGCGCGTGGATGAGCTGGACTATGG AGCACCACTGGCCGGACAGAAAAAGAAACCATTCGAGGAGCATTGGCGCA AGCACACCATGACCTTTGCACTGGGTAACAAAGGATGTGCATCGATCAAA TATCGCCCGGTTGTGGACACCACCTTGGACAGCTCCGTTGCACCCATTCC ACCTGCTCCGCGCACCTACTGAACATTTATGTGTAGTTTTGAGCTGGTAC AGTTTCATTCTCTTACATTCTCTGGGATATTAAAACAAAAACACATATTG ACTATCAAAATGTGGCCATTTTGTATAAATATATAAGATGAAAACAACAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5718-RA | 2155 | CG5718-RA | 1..2155 | 1..2155 | 10775 | 100 | Plus |
SdhA-RC | 2752 | SdhA-RC | 319..645 | 207..533 | 450 | 75.8 | Plus |
SdhA-RB | 2819 | SdhA-RB | 386..712 | 207..533 | 450 | 75.8 | Plus |
SdhA-RC | 2752 | SdhA-RC | 997..1062 | 891..956 | 210 | 87.8 | Plus |
SdhA-RB | 2819 | SdhA-RB | 1064..1129 | 891..956 | 210 | 87.8 | Plus |
SdhA-RC | 2752 | SdhA-RC | 1109..1183 | 1003..1077 | 150 | 80 | Plus |
SdhA-RB | 2819 | SdhA-RB | 1176..1250 | 1003..1077 | 150 | 80 | Plus |
SdhA-RC | 2752 | SdhA-RC | 1808..1860 | 1702..1754 | 145 | 84.9 | Plus |
SdhA-RB | 2819 | SdhA-RB | 1875..1927 | 1702..1754 | 145 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11915703..11917857 | 2155..1 | 10775 | 100 | Minus |
2R | 25260384 | 2R | 19395197..19395523 | 533..207 | 450 | 75.8 | Minus |
2R | 25260384 | 2R | 19394780..19394845 | 956..891 | 210 | 87.8 | Minus |
2R | 25260384 | 2R | 19394659..19394733 | 1077..1003 | 150 | 80 | Minus |
2R | 25260384 | 2R | 19393926..19393978 | 1754..1702 | 145 | 84.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11913435..11915582 | 1..2148 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..1956 | 67..2022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..1956 | 67..2022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..1956 | 67..2022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..1956 | 67..2022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..1956 | 67..2022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..2148 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..2148 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..2148 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..2148 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5718-RA | 1..2148 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11922610..11924757 | 1..2148 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11922610..11924757 | 1..2148 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11922610..11924757 | 1..2148 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11915710..11917857 | 1..2148 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11915710..11917857 | 1..2148 | 100 | Minus |
Translation from 66 to 2021
> GH25972.pep MNRLFLKRAGQHVTRSLLGPNGSRLLQVSCVRDASCKDEYSLIDHKFDAI VIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVAAQGGVNAALSNMD KDDWKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMYGMPFSRKPD GKIYQRPFGGQTLDYGKGGVARRACACADRTGHALIHTLYGQTLKHSDSC HYFVDYFVLDLIMSQGACVGCLAWKLDDGTFHRFLAKNTVVAAGGCGRVY FSTTAGHTCTGDGNAWVSRQELPLMDMEFVQFHPTGIYGAGCLITEGVRG EGGFFLNCKGERFMERYAPKAKDLASRDVVARAMTMEVLAGNGCGPLKDH VHLQLHHIDAKIIKQRLPGIMVTARIFAKVDVTKEPVPVLPTVHYNMGGI PTDYKGRVVTIDENGKEQVVKGLYSCGETSCASVHGANRLGANSLLDLII FGRVCALDIAANNCPGDKPPQVEDKATEKSLDNFKRLRCADGCIPTAVLR MELQRTMTKHAAVFREGKLLKEGLLKVAELCEQFKDIKTTDRTMVWNSNL VETLELQNMLANAVHIITAMENRKESRGSHAREDFKTRVDELDYGAPLAG QKKKPFEEHWRKHTMTFALGNKGCASIKYRPVVDTTLDSSVAPIPPAPRT Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24501-PA | 645 | GF24501-PA | 1..645 | 1..651 | 2853 | 81.9 | Plus |
Dana\GF12611-PA | 661 | GF12611-PA | 39..661 | 27..651 | 2183 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13871-PA | 651 | GG13871-PA | 1..651 | 1..651 | 3309 | 95.2 | Plus |
Dere\GG20911-PA | 661 | GG20911-PA | 39..661 | 27..651 | 2174 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16714-PA | 644 | GH16714-PA | 29..644 | 36..651 | 2756 | 80.5 | Plus |
Dgri\GH22974-PA | 667 | GH22974-PA | 45..667 | 27..651 | 2239 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SdhAL-PA | 651 | CG5718-PA | 1..651 | 1..651 | 3474 | 100 | Plus |
SdhA-PA | 661 | CG17246-PA | 39..661 | 27..651 | 2182 | 63.7 | Plus |
SdhA-PC | 661 | CG17246-PC | 39..661 | 27..651 | 2182 | 63.7 | Plus |
SdhA-PB | 661 | CG17246-PB | 39..661 | 27..651 | 2182 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18459-PA | 666 | GI18459-PA | 56..666 | 39..651 | 2258 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25074-PA | 590 | GL25074-PA | 8..590 | 5..651 | 2309 | 71.1 | Plus |
Dper\GL11254-PA | 661 | GL11254-PA | 39..661 | 27..651 | 2162 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19081-PA | 648 | GA19081-PA | 8..648 | 5..651 | 2773 | 81.5 | Plus |
Dpse\GA14410-PA | 661 | GA14410-PA | 39..661 | 27..651 | 2162 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24693-PA | 651 | GM24693-PA | 1..651 | 1..651 | 3474 | 98.5 | Plus |
Dsec\GM19835-PA | 636 | GM19835-PA | 39..636 | 27..651 | 2082 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12763-PA | 612 | GD12763-PA | 1..612 | 1..651 | 3191 | 92 | Plus |
Dsim\GD25325-PA | 657 | GD25325-PA | 39..657 | 27..651 | 2119 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11663-PA | 651 | GJ11663-PA | 25..651 | 24..651 | 2751 | 81.4 | Plus |
Dvir\GJ21546-PA | 665 | GJ21546-PA | 43..665 | 27..651 | 2235 | 63.5 | Plus |
Translation from 66 to 2021
> GH25972.hyp MNRLFLKRAGQHVTRSLLGPNGSRLLQVSCVRDASCKDEYSLIDHKFDAI VIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVAAQGGVNAALSNMD KDDWKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMYGMPFSRKPD GKIYQRPFGGQTLDYGKGGVARRACACADRTGHALIHTLYGQTLKHSDSC HYFVDYFVLDLIMSQGACVGCLAWKLDDGTFHRFLAKNTVVAAGGCGRVY FSTTAGHTCTGDGNAWVSRQELPLMDMEFVQFHPTGIYGAGCLITEGVRG EGGFFLNCKGERFMERYAPKAKDLASRDVVARAMTMEVLAGNGCGPLKDH VHLQLHHIDAKIIKQRLPGIMVTARIFAKVDVTKEPVPVLPTVHYNMGGI PTDYKGRVVTIDENGKEQVVKGLYSCGETSCASVHGANRLGANSLLDLII FGRVCALDIAANNCPGDKPPQVEDKATEKSLDNFKRLRCADGCIPTAVLR MELQRTMTKHAAVFREGKLLKEGLLKVAELCEQFKDIKTTDRTMVWNSNL VETLELQNMLANAVHIITAMENRKESRGSHAREDFKTRVDELDYGAPLAG QKKKPFEEHWRKHTMTFALGNKGCASIKYRPVVDTTLDSSVAPIPPAPRT Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5718-PA | 651 | CG5718-PA | 1..651 | 1..651 | 3474 | 100 | Plus |
SdhA-PA | 661 | CG17246-PA | 39..661 | 27..651 | 2182 | 63.7 | Plus |
SdhA-PC | 661 | CG17246-PC | 39..661 | 27..651 | 2182 | 63.7 | Plus |
SdhA-PB | 661 | CG17246-PB | 39..661 | 27..651 | 2182 | 63.7 | Plus |