BDGP Sequence Production Resources |
Search the DGRC for GH25976
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 259 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4729-RD |
Protein status: | GH25976.pep: gold |
Preliminary Size: | 1074 |
Sequenced Size: | 863 |
Gene | Date | Evidence |
---|---|---|
CG4729 | 2001-01-01 | Release 2 assignment |
CG4729 | 2001-07-04 | Blastp of sequenced clone |
CG4729 | 2008-04-29 | Release 5.5 accounting |
CG4729 | 2008-08-15 | Release 5.9 accounting |
CG4729 | 2008-12-18 | 5.12 accounting |
863 bp (863 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051615
> GH25976.complete CAACCTTAATTTTTTAACTGAGTAATTTGGCGTTCTAATGATAAGTGCAT AGAATTTAGCAAATTGCAAATTTATTATGGTTTTAAATTAAACTCGCAGA AACCCCCGCCACAATGCTGAGTTTGCTGCATGGAAAGAGCGTGGAACCGC ACCTGCTGATGAGGCGTATTCCACTGGAACAGGTTCCGGAGGATGAGAAG GAGGCGGCCGCCTGGCTGCAGAACCTGTTCGTGGAGAAGGACAAGATCAT CGATAGCTTCCTGGAGACGGGCAGCTTCTTTAAGACGTCCGGCATAAAGG AGGTTCCGGCATATGTGAATAAACGCCGGCTGTGCTCACTCGTGAACTTT GTCTGCTGGGCGGTATTCTCTCTGTCCTGCATTTTCTACTACGTGATCAC ATCCCTGCTGGCGGCCAACTGGACGGCCTTTATCACCGCACTTTCCGTCC TGGGACTTTTTTACTGGCTCATGGGTCAGGCCATCAACAAGACGCAGATC AGCAAGGCATCTAATTATGGATCCTCCAAGTCGGTCGCAAAGTAACTTTC GAATTCGCATTTAGTTTCGATTGTCGTCGAACTCAATTATCTACAAATGA CTTTGTAAAAGGCAGTCCTCTCACAAATCTCTCTGCTAAATGGATCAATT CGTGATTCCTATCCGGACGATTTAAAGTGTTTTGCATGTTTTTCTTGTCT AAGTTTATAGTTACGAAGTAACTCCCGCACACTGGAGCCATCAATTTGCG TACGTAGTTGGTAGTTGTACACCTAAGTGGAAATTTAATTGTTTGATCAA TTGTATTTTGGCGAGCATTGCAATAATTAAATTAAACAGAACGTGAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16371527..16371912 | 845..460 | 1900 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 16372137..16372494 | 459..102 | 1790 | 100 | Minus |
chr3L | 24539361 | chr3L | 16372587..16372687 | 101..1 | 505 | 100 | Minus |
chr3L | 24539361 | chr3L | 16369174..16369307 | 304..171 | 325 | 82.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16381771..16382157 | 846..460 | 1935 | 100 | Minus |
3L | 28110227 | 3L | 16382382..16382739 | 459..102 | 1790 | 100 | Minus |
3L | 28110227 | 3L | 16382832..16382932 | 101..1 | 505 | 100 | Minus |
3L | 28110227 | 3L | 16379425..16379558 | 304..171 | 325 | 82.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16374871..16375257 | 846..460 | 1935 | 100 | Minus |
3L | 28103327 | 3L | 16375482..16375839 | 459..102 | 1790 | 100 | Minus |
3L | 28103327 | 3L | 16375932..16376032 | 101..1 | 505 | 100 | Minus |
3L | 28103327 | 3L | 16372525..16372658 | 304..171 | 325 | 82.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Juan | 4236 | Juan JUAN 4236bp | 2617..2761 | 824..688 | 111 | 58.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16371527..16371912 | 460..845 | 99 | <- | Minus |
chr3L | 16372137..16372494 | 102..459 | 100 | <- | Minus |
chr3L | 16372587..16372687 | 1..101 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RB | 718..1161 | 102..545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RB | 718..1161 | 102..545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RC | 718..1161 | 102..545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RB | 718..1161 | 102..545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RC | 718..1161 | 102..545 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RD | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RD | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RD | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RD | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4729-RD | 1..845 | 1..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16382382..16382739 | 102..459 | 100 | <- | Minus |
3L | 16382832..16382932 | 1..101 | 100 | Minus | |
3L | 16381772..16382157 | 460..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16382382..16382739 | 102..459 | 100 | <- | Minus |
3L | 16382832..16382932 | 1..101 | 100 | Minus | |
3L | 16381772..16382157 | 460..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16382382..16382739 | 102..459 | 100 | <- | Minus |
3L | 16382832..16382932 | 1..101 | 100 | Minus | |
3L | 16381772..16382157 | 460..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16374872..16375257 | 460..845 | 100 | <- | Minus |
arm_3L | 16375482..16375839 | 102..459 | 100 | <- | Minus |
arm_3L | 16375932..16376032 | 1..101 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16374872..16375257 | 460..845 | 100 | <- | Minus |
3L | 16375482..16375839 | 102..459 | 100 | <- | Minus |
3L | 16375932..16376032 | 1..101 | 100 | Minus |
Translation from 113 to 544
> GH25976.pep MLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFL ETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCWAVFSLSCIFYYVITSLLA ANWTAFITALSVLGLFYWLMGQAINKTQISKASNYGSSKSVAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10214-PA | 386 | GF10214-PA | 244..386 | 1..143 | 666 | 87.4 | Plus |
Dana\GF10215-PA | 379 | GF10215-PA | 239..376 | 1..138 | 439 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13455-PA | 387 | GG13455-PA | 244..382 | 1..139 | 726 | 98.6 | Plus |
Dere\GG13456-PA | 379 | GG13456-PA | 239..376 | 1..138 | 460 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15594-PA | 387 | GH15594-PA | 244..380 | 1..137 | 542 | 73.7 | Plus |
Dgri\GH15593-PA | 383 | GH15593-PA | 243..380 | 3..140 | 408 | 57.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Agpat3-PD | 143 | CG4729-PD | 1..143 | 1..143 | 734 | 100 | Plus |
Agpat3-PB | 386 | CG4729-PB | 244..386 | 1..143 | 734 | 100 | Plus |
Agpat3-PC | 386 | CG4729-PC | 244..386 | 1..143 | 734 | 100 | Plus |
Agpat3-PA | 386 | CG4729-PA | 244..386 | 1..143 | 734 | 100 | Plus |
Agpat3-PE | 397 | CG4729-PE | 255..397 | 1..143 | 734 | 100 | Plus |
Agpat4-PC | 380 | CG4753-PC | 239..376 | 1..138 | 451 | 60.9 | Plus |
Agpat4-PA | 380 | CG4753-PA | 239..376 | 1..138 | 451 | 60.9 | Plus |
Agpat4-PB | 380 | CG4753-PB | 239..376 | 1..138 | 451 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16871-PA | 388 | GI16871-PA | 244..381 | 1..138 | 553 | 75.4 | Plus |
Dmoj\GI16870-PA | 387 | GI16870-PA | 245..385 | 3..143 | 330 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17998-PA | 389 | GL17998-PA | 244..383 | 1..140 | 616 | 82.1 | Plus |
Dper\GL17999-PA | 383 | GL17999-PA | 239..383 | 1..143 | 478 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18389-PA | 389 | GA18389-PA | 244..383 | 1..140 | 616 | 82.1 | Plus |
Dpse\GA18406-PA | 383 | GA18406-PA | 239..383 | 1..143 | 478 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24405-PA | 386 | GM24405-PA | 244..386 | 1..143 | 738 | 97.9 | Plus |
Dsec\GM24407-PA | 378 | GM24407-PA | 239..377 | 1..139 | 459 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12474-PA | 386 | GD12474-PA | 244..386 | 1..143 | 744 | 98.6 | Plus |
Dsim\GD12475-PA | 380 | GD12475-PA | 239..367 | 1..129 | 424 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12621-PA | 388 | GJ12621-PA | 244..383 | 1..140 | 539 | 73.6 | Plus |
Dvir\GJ12620-PA | 337 | GJ12620-PA | 195..335 | 3..143 | 415 | 54.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20785-PA | 395 | GK20785-PA | 244..386 | 1..142 | 581 | 79 | Plus |
Dwil\GK20796-PA | 382 | GK20796-PA | 239..378 | 1..140 | 484 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22556-PA | 387 | GE22556-PA | 244..383 | 1..140 | 730 | 98.6 | Plus |
Dyak\GE22903-PA | 387 | GE22903-PA | 244..383 | 1..140 | 730 | 98.6 | Plus |
Dyak\GE22904-PA | 379 | GE22904-PA | 239..376 | 1..138 | 454 | 60.1 | Plus |
Dyak\GE22557-PA | 379 | GE22557-PA | 239..376 | 1..138 | 454 | 60.1 | Plus |
Translation from 113 to 544
> GH25976.hyp MLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFL ETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCWAVFSLSCIFYYVITSLLA ANWTAFITALSVLGLFYWLMGQAINKTQISKASNYGSSKSVAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4729-PD | 143 | CG4729-PD | 1..143 | 1..143 | 734 | 100 | Plus |
CG4729-PB | 386 | CG4729-PB | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PC | 386 | CG4729-PC | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PA | 386 | CG4729-PA | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PE | 397 | CG4729-PE | 255..397 | 1..143 | 734 | 100 | Plus |