Clone GH26014 Report

Search the DGRC for GH26014

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:260
Well:14
Vector:pOT2
Associated Gene/TranscriptSide-RA
Protein status:GH26014.pep: gold
Preliminary Size:2486
Sequenced Size:2128

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10446 2001-01-01 Release 2 assignment
CG10446 2001-10-10 Blastp of sequenced clone
CG10446 2003-01-01 Sim4 clustering to Release 3
Side 2008-04-29 Release 5.5 accounting
Side 2008-08-15 Release 5.9 accounting
Side 2008-12-18 5.12 accounting

Clone Sequence Records

GH26014.complete Sequence

2128 bp (2128 high quality bases) assembled on 2001-10-10

GenBank Submission: AY060791

> GH26014.complete
ACGAAGTGAAAAGTCGCAATTGTTTCGCTGCTCGCCGTCAGTTAGCCGTG
AATCCTCGAACAGAACGGACGCGTGTCCTCCTCGTCGAGTGGAATTTGAA
TCCTGATTCCACCACCAAAAAGACGTGATTGTTGGCGGGTGGATTCTAAA
CTGAAAGTTTCGAAAATATTAAACCCAAATCAAGCCAAATTGAGAAAACG
AGGCATTTCATTCTAATTGACGACGGGCAACGAATTCTTTTGGATTTCGT
AAAAATGAGAAAATGACAGCAAAACGTGATAAGGATTACTCAAAAAATAA
ATCAGCACCTGGCATCGGATTCACCGCCGCCGGCTCAACTAATGGCAGCG
GCATAAAGTCCATCGGGCTGGTGAGCTCAACGCAGAATGTGACTTCGTCG
CAGGACATCAGCAAGCGGACAAACAAACCACTCATGGAGAAGCGCCGGCG
GGCGCGAATCAACCAGAGCCTGGCCATCCTGAAGGCCCTCATCCTCGAGT
CCACCAAGACCCAAAATGCCAAGAACGGCGAGGGCCAGGCGAAGCACACC
AAGCTGGAGAAGGCGGACATCCTGGAGCTAACCGTTCGCCACTTTCAGCG
GCATCGCAATCTCGACGATCCCACGGTTAACAAATACAGAGCTGGTTACA
CGGACTGCGCTCGCGAGGTGGCTCGTTACCTGGCCACCCCGGAACCGCCG
CCCATGGGCACCATGCCCACCTTGGCGGAGCCCGGCTCCAAGGCGCGACT
GCTGCGCCACCTGGACCAGTGCATAGCCGAGATCGACGTGGAGATCTGTC
CCCATTCGACGGCCGCGTTTGCCGAAAGCCCCAGCAGTAGCAGTTGCTTC
GACCTGAATCACGGGAAGAAGTCGCAGCCCGAGGAGCATTCGCTGGACTA
CAGCAGCCAGGATTCGAATCCAGTGGACTACAGCAAGGGTCTGAAAATGG
TAGCCGCTGAGCAGAGGACGCTGCCCGTCACGCCAGCACCCCAGGATGAG
AACAACAATCGTGGACTCCAGGCGCAGGCGCAAACTCCGATACCAATACA
GGTGCAAAGCCAGACACAAGGCCAGACGTCGCCGCATGTAGATGCCGTCG
CTCCCAGCGAGCTGAGCTACGAGGAGGATCGCAACAAGGTGTGCGCCAAT
GTCCTGGAGCAGTACAAGCAACAGCTTAAGGCGCACGTGCAGCAGCAACC
AGAGTCCGCCAACGGAGTCCTGGTCCTGCCGCCCCACTATGTCCAGCTGG
CAGCGGCCCTTGGCCTTAGTGCCCAGCCGCTGGTGGATCCGATTGCTACC
CGAACGGATTTTGAGCGGTTGATAGAGTTGCAACGGGTTCAACCACATTT
GGCCGGCAAGTTGAGTCCCAGTTTTCCGGGAGGCTTGGAGGCTGCCCATG
TCGCTGCCGCAGCAGCGGCTTATGCCAACAGCATGGCTGTGGCCGCTTCA
GCAGGAGCCTCAGTTGCGGCAATGGCTACTTCCGGTGCCGGAACGCCAAC
GGTGCACCAAGAGAGACCTGCCTCGGTGGCAGCGTCTGTCAGTTCCGGCG
TCTCGATGTCGGAACTGAAGTCCATGCCCGCCACGCAGCAATCCTCACCA
AGATCCGAGAGTGGCATCGGTTCCAATGAGAACGAGGCTCCGGCGACCAG
TCCGCGACCCCAGACAAGCAACGCCGCTCGTCAGGCTCTAAGGCAACGCC
AGGAGGAGGAGTATCACTACATGGCCCAGGCGGCAGCTGCTGCAGCAGCA
GCTGGGCAAGATGAGAGCATGTGGCGACCCTGGTGAGCCGTTAGGTCAGA
GATCCTACGTACTAAGTATGTAGACACCACCAGTTAGTTAGGGGAGAACC
AGCCGGCAGCCGGCGGTTTGCTGCCCCCACTGATCGCCAAGTAGAGGATG
ACACCTATTGTTATTACCGCTCGTCTGTGTAGCTCCTGCATCTCTCCAAA
TTGCATTTCCAACCTGTGCCAACGCCCAAGACTCTCTACAAGATGGGTTC
CAGAGCCAAGGAGAGCTACCCTTTCATTTATGTATGCATTTGTTTTTGCC
CTGAACTCTGCGTTAAATGTATTTAATTCAATACATAAAGCAAAAATATT
TACAAAAAAAAAAAAAAAAAAAAAAAAA

GH26014.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:02:43
Subject Length Description Subject Range Query Range Score Percent Strand
Side-RA 2252 Side-RA 143..2252 1..2110 10550 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19027917..19029396 624..2103 7400 100 Plus
chr2L 23010047 chr2L 19027416..19027728 311..623 1565 100 Plus
chr2L 23010047 chr2L 19026423..19026734 1..312 1560 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19029301..19030787 624..2110 7435 100 Plus
2L 23513712 2L 19028800..19029112 311..623 1565 100 Plus
2L 23513712 2L 19027795..19028106 1..312 1560 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19029301..19030787 624..2110 7435 100 Plus
2L 23513712 2L 19028800..19029112 311..623 1565 100 Plus
2L 23513712 2L 19027795..19028106 1..312 1560 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:47:27 has no hits.

GH26014.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:48:32 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19026423..19026733 1..311 100 -> Plus
chr2L 19027417..19027728 312..623 100 -> Plus
chr2L 19027917..19029396 624..2103 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:56:42 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 1..1524 263..1786 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:36:56 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 1..1524 263..1786 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:41:46 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 1..1524 263..1786 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:05:49 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 1..1524 263..1786 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:08:24 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 1..1524 263..1786 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:17:24 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 84..2186 1..2103 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:36:56 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 84..2186 1..2103 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:41:46 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 86..2188 1..2103 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:05:49 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 84..2186 1..2103 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:08:24 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
Side-RA 86..2188 1..2103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:48:32 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19027795..19028105 1..311 100 -> Plus
2L 19028801..19029112 312..623 100 -> Plus
2L 19029301..19030780 624..2103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:48:32 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19027795..19028105 1..311 100 -> Plus
2L 19028801..19029112 312..623 100 -> Plus
2L 19029301..19030780 624..2103 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:48:32 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19027795..19028105 1..311 100 -> Plus
2L 19028801..19029112 312..623 100 -> Plus
2L 19029301..19030780 624..2103 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:41:46 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19027795..19028105 1..311 100 -> Plus
arm_2L 19028801..19029112 312..623 100 -> Plus
arm_2L 19029301..19030780 624..2103 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:41:45 Download gff for GH26014.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19027795..19028105 1..311 100 -> Plus
2L 19028801..19029112 312..623 100 -> Plus
2L 19029301..19030780 624..2103 100   Plus

GH26014.pep Sequence

Translation from 262 to 1785

> GH26014.pep
MTAKRDKDYSKNKSAPGIGFTAAGSTNGSGIKSIGLVSSTQNVTSSQDIS
KRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEK
ADILELTVRHFQRHRNLDDPTVNKYRAGYTDCAREVARYLATPEPPPMGT
MPTLAEPGSKARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFDLNH
GKKSQPEEHSLDYSSQDSNPVDYSKGLKMVAAEQRTLPVTPAPQDENNNR
GLQAQAQTPIPIQVQSQTQGQTSPHVDAVAPSELSYEEDRNKVCANVLEQ
YKQQLKAHVQQQPESANGVLVLPPHYVQLAAALGLSAQPLVDPIATRTDF
ERLIELQRVQPHLAGKLSPSFPGGLEAAHVAAAAAAYANSMAVAASAGAS
VAAMATSGAGTPTVHQERPASVAASVSSGVSMSELKSMPATQQSSPRSES
GIGSNENEAPATSPRPQTSNAARQALRQRQEEEYHYMAQAAAAAAAAGQD
ESMWRPW*

GH26014.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14690-PA 510 GF14690-PA 1..510 1..507 2030 86.4 Plus
Dana\GF24345-PA 346 GF24345-PA 33..148 51..178 263 42.6 Plus
Dana\GF12602-PA 441 GF12602-PA 41..152 51..170 241 42.2 Plus
Dana\GF11221-PA 418 GF11221-PA 89..262 45..232 174 32.2 Plus
Dana\GF16795-PA 182 GF16795-PA 3..110 37..142 163 40.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21149-PA 509 GG21149-PA 1..509 1..507 2622 97.2 Plus
Dere\GG14338-PA 339 GG14338-PA 4..147 19..178 268 39.9 Plus
Dere\GG10662-PA 435 GG10662-PA 41..157 51..175 254 44.4 Plus
Dere\GG11449-PA 173 GG11449-PA 3..110 37..142 158 39.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10835-PA 523 GH10835-PA 1..523 1..507 1642 67.9 Plus
Dgri\GH20825-PA 456 GH20825-PA 41..152 51..170 257 44.5 Plus
Dgri\GH19452-PA 217 GH19452-PA 16..110 51..141 156 38.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
Sidpn-PA 507 CG10446-PA 1..507 1..507 2575 100 Plus
h-PB 337 CG6494-PB 4..290 19..388 282 27.8 Plus
h-PA 337 CG6494-PA 4..290 19..388 282 27.8 Plus
dpn-PA 435 CG8704-PA 41..435 51..507 238 24.9 Plus
Hey-PA 425 CG11194-PA 95..329 45..275 163 25.9 Plus
E(spl)mdelta-HLH-PA 173 CG8328-PA 3..110 37..142 151 41.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17350-PA 528 GI17350-PA 1..528 1..507 1665 69.9 Plus
Dmoj\GI20925-PA 473 GI20925-PA 41..152 51..170 260 45.3 Plus
Dmoj\GI12920-PA 368 GI12920-PA 32..147 51..178 255 42.6 Plus
Dmoj\GI19174-PA 407 GI19174-PA 91..190 45..144 161 38.5 Plus
Dmoj\GI24685-PA 185 GI24685-PA 3..118 37..142 150 37.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18909-PA 497 GL18909-PA 1..497 1..507 1956 82.6 Plus
Dper\GL10333-PA 354 GL10333-PA 41..156 51..178 263 41.9 Plus
Dper\GL10878-PA 439 GL10878-PA 41..151 51..170 249 43 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10322-PA 497 GA10322-PA 1..497 1..507 1977 83.2 Plus
Dpse\GA19636-PA 354 GA19636-PA 41..156 51..178 262 41.9 Plus
Dpse\GA21268-PA 450 GA21268-PA 41..156 51..175 249 41.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17313-PA 507 GM17313-PA 1..507 1..507 2666 98.6 Plus
Dsec\GM25080-PA 337 GM25080-PA 4..147 19..178 271 39.9 Plus
Dsec\GM20707-PA 435 GM20707-PA 41..152 51..170 255 46.1 Plus
Dsec\GM10293-PA 173 GM10293-PA 3..110 37..142 158 39.7 Plus
Dsec\GM20733-PA 320 GM20733-PA 1..140 49..193 158 33.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24173-PA 507 GD24173-PA 1..507 1..507 2677 99.2 Plus
Dsim\h-PA 337 GD14118-PA 4..147 19..178 271 39.9 Plus
Dsim\GD15288-PA 435 GD15288-PA 41..152 51..170 253 46.1 Plus
Dsim\HLHmdelta-PA 173 GD21257-PA 3..110 37..142 158 39.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16129-PA 515 GJ16129-PA 1..515 1..507 1644 71.7 Plus
Dvir\GJ20653-PA 555 GJ20653-PA 127..247 34..170 255 42.1 Plus
Dvir\h-PA 379 GJ13064-PA 39..154 51..178 253 42.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24825-PA 514 GK24825-PA 1..514 1..507 1792 73.1 Plus
Dwil\h-PA 380 GK16728-PA 4..147 19..178 274 39.9 Plus
Dwil\GK15770-PA 465 GK15770-PA 41..152 51..170 244 43 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13222-PA 507 GE13222-PA 1..507 1..507 2649 98 Plus
Dyak\GE20765-PA 338 GE20765-PA 4..147 19..178 269 39.3 Plus
Dyak\GE23198-PA 435 GE23198-PA 41..152 51..170 255 46.1 Plus
Dyak\HLHmdelta-PA 173 GE23643-PA 3..110 37..142 157 39.7 Plus

GH26014.hyp Sequence

Translation from 262 to 1785

> GH26014.hyp
MTAKRDKDYSKNKSAPGIGFTAAGSTNGSGIKSIGLVSSTQNVTSSQDIS
KRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEK
ADILELTVRHFQRHRNLDDPTVNKYRAGYTDCAREVARYLATPEPPPMGT
MPTLAEPGSKARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFDLNH
GKKSQPEEHSLDYSSQDSNPVDYSKGLKMVAAEQRTLPVTPAPQDENNNR
GLQAQAQTPIPIQVQSQTQGQTSPHVDAVAPSELSYEEDRNKVCANVLEQ
YKQQLKAHVQQQPESANGVLVLPPHYVQLAAALGLSAQPLVDPIATRTDF
ERLIELQRVQPHLAGKLSPSFPGGLEAAHVAAAAAAYANSMAVAASAGAS
VAAMATSGAGTPTVHQERPASVAASVSSGVSMSELKSMPATQQSSPRSES
GIGSNENEAPATSPRPQTSNAARQALRQRQEEEYHYMAQAAAAAAAAGQD
ESMWRPW*

GH26014.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
Side-PA 507 CG10446-PA 1..507 1..507 2575 100 Plus
h-PB 337 CG6494-PB 4..290 19..388 282 27.8 Plus
h-PA 337 CG6494-PA 4..290 19..388 282 27.8 Plus
dpn-PA 435 CG8704-PA 41..435 51..507 238 24.9 Plus
Hey-PA 425 CG11194-PA 95..329 45..275 163 25.9 Plus