BDGP Sequence Production Resources |
Search the DGRC for GH26015
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 260 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8888-RA |
Protein status: | GH26015.pep: gold |
Preliminary Size: | 1772 |
Sequenced Size: | 1705 |
Gene | Date | Evidence |
---|---|---|
CG8888 | 2001-01-01 | Release 2 assignment |
CG8888 | 2001-09-19 | Blastp of sequenced clone |
CG8888 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8888 | 2008-04-29 | Release 5.5 accounting |
CG8888 | 2008-08-15 | Release 5.9 accounting |
CG8888 | 2008-12-18 | 5.12 accounting |
1705 bp (1705 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058459
> GH26015.complete CTCAGAGCGCCCAGGCCACGGGCCCCCAAACCGTACCGCTGCGGAAAATC GATCTTGAAAATATATACAATACAAAAAAAAATCTAAAACTCTAGCACCG GATATATTATAGTCTAAGACTACGAGAATTGCCCACTTCATTGGGAAAGT GCGTGAAAATCCGAACATTACCATCGACCATCTACACCATCATCAGCATC CGTCATGCAGGTCTTCGATAACAATATGCGCCGTGCCTCGCGACGCGCCT CCTTGCGACGAGGATCCATATCGGCACTGCCGCAGAAGTCGCACGAGATT CCCTGGGACATATTCGAGCGACTATTCATGCCCTTCCTGTTCTGCCAGGC GGCGGCCATTGTCACATCGCACCTGCTCCACGCCCTGGACATCTCGAGCA TCTCGACCTTCGCCGTGTTCGTCTGGTTCGCTCTGGCCACCGTGGGAGCC GTGCTCTTCTATCACTTCGTCAAGGTTTCGGCTTCGGGCAAGGGCGTGCT AATCACTGGCTGCGAGGCTCCACTGGCCTGGTACTTGGCCAAGAAACTGG ACGACCTGGGCTTCACCGTTTACGCAGGATTCAACACGCCCATCGAGGAG TCGGACGAGGCCAAGATTCTCAAGGAGGTGACCTCGGGGCGCATGAAGCT GCTGCACTTGGACGTCACGTCGGAGAAAACCATCCTGGAAGCTGCCCGCT ATGTGTCGCAGCACTTACCCCACGGCGCCGAAGGATTGTGGTCTGTGGTG CACTGCGCCCACTGGATAGCTTTGGGTGAACTCGAGTGGATTCCATTTGC GGTGCTTCGCAAGAGCTTGGACCTCAACCTTTTGGGTTCCGCTCGGCTAA CACAAATCTTCCTGCCCCTGGTTCGCCGTGCCCATGGTCGCGTCGTTTTC CTGACCTCCGGCCTGAATCGTGTGCCATCTCCCGTCCGGGGAATCCAGTG TGCCACCCAAGCGGCCGTGGATTGCTTTGCCGCCTGTCTGCGCCAGGAGA TGCGCACCCGGGGAGTGGACGTGTCCGTGGTGGCTGCCGGTGAATTTGCA CCCGGCAACGGCTGGCTGAACGAGACCGAGCTGCGTGACCAGGCCAAGCA AATGTGGAACCAGCTTTCCTCGGAGCAGAAGAAGACCTACGGCGAGGATT ACTACGAGGCGGCCATGACATCGGTGGAGAAGTATTCGCGCCAGGCGGCC GATATCCAGCCCACGCTGCGCGTCCTCATCGATGCCGTGACCAGGACCTT CCCCATGGCCCGCTACACCCCAGTGACATCCAGCGAGCGACTGCAGATCT TCCTAGCCGAACACCTGGCCCCCTCTCTCTACGAATCGCTGTACGGGGAG CAGAAGAAGTTCGTCTACTGACCAACCTCCGTTCACCGTCCATCGCCAAA GATAAGAATCTCCATCGAAACGGCCCGATATTGTAATTCGGAAATTGTTA TTCATTTATGATTTGCCTCGAAATCCAAACCCTGCTCCTTGGTGCGCGTG AAGGACACCCAGAAAGGAACTGTAGCCAGGAGCACTGTTCAAGGCGCTCC GGCCGTCGATGAGCATTTACGTCCTTCTCTCGATTATTCTCATGATTTTC CCTTTACGGAGGCGTCTGCATAATATTATTTTCTTTAGTTGCTAGAACGA ATTGTATAACGATGAATAAAAAGAAAATGGAAACAATAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8888-RA | 1771 | CG8888-RA | 59..1745 | 1..1687 | 8435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7951801..7952297 | 1687..1191 | 2425 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 7952925..7953183 | 1093..835 | 1220 | 98.1 | Minus |
chr2R | 21145070 | chr2R | 7964273..7964521 | 476..228 | 1215 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 7966517..7966744 | 228..1 | 1140 | 100 | Minus |
chr2R | 21145070 | chr2R | 7953734..7953942 | 681..473 | 1030 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 7953239..7953394 | 837..682 | 750 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 7952364..7952469 | 1195..1090 | 515 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12064565..12065061 | 1687..1191 | 2485 | 100 | Minus |
2R | 25286936 | 2R | 12065689..12065947 | 1093..835 | 1295 | 100 | Minus |
2R | 25286936 | 2R | 12077051..12077299 | 476..228 | 1245 | 100 | Minus |
2R | 25286936 | 2R | 12079295..12079522 | 228..1 | 1140 | 100 | Minus |
2R | 25286936 | 2R | 12066494..12066702 | 681..473 | 1045 | 100 | Minus |
2R | 25286936 | 2R | 12066006..12066161 | 837..682 | 780 | 100 | Minus |
2R | 25286936 | 2R | 12065128..12065233 | 1195..1090 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12065764..12066260 | 1687..1191 | 2485 | 100 | Minus |
2R | 25260384 | 2R | 12066888..12067146 | 1093..835 | 1295 | 100 | Minus |
2R | 25260384 | 2R | 12078250..12078498 | 476..228 | 1245 | 100 | Minus |
2R | 25260384 | 2R | 12080494..12080721 | 228..1 | 1140 | 100 | Minus |
2R | 25260384 | 2R | 12067693..12067901 | 681..473 | 1045 | 100 | Minus |
2R | 25260384 | 2R | 12067205..12067360 | 837..682 | 780 | 100 | Minus |
2R | 25260384 | 2R | 12066327..12066432 | 1195..1090 | 530 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7952926..7953182 | 836..1092 | 98 | <- | Minus |
chr2R | 7953241..7953394 | 682..835 | 98 | <- | Minus |
chr2R | 7953734..7953940 | 475..681 | 99 | <- | Minus |
chr2R | 7951801..7952293 | 1195..1687 | 99 | <- | Minus |
chr2R | 7952365..7952466 | 1093..1194 | 99 | <- | Minus |
chr2R | 7964275..7964520 | 229..474 | 99 | <- | Minus |
chr2R | 7966517..7966744 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 1..1167 | 205..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 1..1167 | 205..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 1..1167 | 205..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 1..1167 | 205..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 1..1167 | 205..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 20..1706 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 20..1706 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 22..1708 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 20..1706 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8888-RA | 22..1708 | 1..1687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12064565..12065057 | 1195..1687 | 100 | <- | Minus |
2R | 12065129..12065230 | 1093..1194 | 100 | <- | Minus |
2R | 12065690..12065946 | 836..1092 | 100 | <- | Minus |
2R | 12066008..12066161 | 682..835 | 100 | <- | Minus |
2R | 12066494..12066700 | 475..681 | 100 | <- | Minus |
2R | 12077053..12077298 | 229..474 | 100 | <- | Minus |
2R | 12079295..12079522 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12064565..12065057 | 1195..1687 | 100 | <- | Minus |
2R | 12065129..12065230 | 1093..1194 | 100 | <- | Minus |
2R | 12065690..12065946 | 836..1092 | 100 | <- | Minus |
2R | 12066008..12066161 | 682..835 | 100 | <- | Minus |
2R | 12066494..12066700 | 475..681 | 100 | <- | Minus |
2R | 12077053..12077298 | 229..474 | 100 | <- | Minus |
2R | 12079295..12079522 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12064565..12065057 | 1195..1687 | 100 | <- | Minus |
2R | 12065129..12065230 | 1093..1194 | 100 | <- | Minus |
2R | 12065690..12065946 | 836..1092 | 100 | <- | Minus |
2R | 12066008..12066161 | 682..835 | 100 | <- | Minus |
2R | 12066494..12066700 | 475..681 | 100 | <- | Minus |
2R | 12077053..12077298 | 229..474 | 100 | <- | Minus |
2R | 12079295..12079522 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7952070..7952562 | 1195..1687 | 100 | <- | Minus |
arm_2R | 7952634..7952735 | 1093..1194 | 100 | <- | Minus |
arm_2R | 7953195..7953451 | 836..1092 | 100 | <- | Minus |
arm_2R | 7953513..7953666 | 682..835 | 100 | <- | Minus |
arm_2R | 7953999..7954205 | 475..681 | 100 | <- | Minus |
arm_2R | 7964558..7964803 | 229..474 | 100 | <- | Minus |
arm_2R | 7966800..7967027 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12078252..12078497 | 229..474 | 100 | <- | Minus |
2R | 12080494..12080721 | 1..228 | 100 | Minus | |
2R | 12065764..12066256 | 1195..1687 | 100 | <- | Minus |
2R | 12066328..12066429 | 1093..1194 | 100 | <- | Minus |
2R | 12066889..12067145 | 836..1092 | 100 | <- | Minus |
2R | 12067207..12067360 | 682..835 | 100 | <- | Minus |
2R | 12067693..12067899 | 475..681 | 100 | <- | Minus |
Translation from 204 to 1370
> GH26015.pep MQVFDNNMRRASRRASLRRGSISALPQKSHEIPWDIFERLFMPFLFCQAA AIVTSHLLHALDISSISTFAVFVWFALATVGAVLFYHFVKVSASGKGVLI TGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKLL HLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAHWIALGELEWIPFAV LRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCA TQAAVDCFAACLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQM WNQLSSEQKKTYGEDYYEAAMTSVEKYSRQAADIQPTLRVLIDAVTRTFP MARYTPVTSSERLQIFLAEHLAPSLYESLYGEQKKFVY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12646-PA | 388 | GF12646-PA | 1..388 | 1..388 | 2015 | 96.6 | Plus |
Dana\GF23376-PA | 334 | GF23376-PA | 29..306 | 98..381 | 204 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22610-PA | 388 | GG22610-PA | 1..388 | 1..388 | 2066 | 99 | Plus |
Dere\GG11695-PA | 335 | GG11695-PA | 19..305 | 87..380 | 203 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21043-PA | 388 | GH21043-PA | 1..388 | 1..388 | 1883 | 92 | Plus |
Dgri\GH14332-PA | 337 | GH14332-PA | 30..220 | 98..282 | 162 | 28.5 | Plus |
Dgri\GH24762-PA | 336 | GH24762-PA | 30..301 | 98..363 | 157 | 26.5 | Plus |
Dgri\GH24722-PA | 325 | GH24722-PA | 11..235 | 69..273 | 150 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8888-PA | 388 | CG8888-PA | 1..388 | 1..388 | 1999 | 100 | Plus |
sro-PA | 335 | CG12068-PA | 29..305 | 98..380 | 195 | 27.6 | Plus |
CG13377-PB | 330 | CG13377-PB | 11..236 | 69..273 | 155 | 28.4 | Plus |
CG13377-PA | 330 | CG13377-PA | 11..236 | 69..273 | 155 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18645-PA | 388 | GI18645-PA | 1..388 | 1..388 | 1870 | 92.5 | Plus |
Dmoj\GI10427-PA | 331 | GI10427-PA | 30..216 | 98..281 | 167 | 30.7 | Plus |
Dmoj\GI21821-PA | 324 | GI21821-PA | 11..234 | 69..273 | 157 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17387-PA | 319 | GL17387-PA | 91..319 | 160..388 | 1191 | 94.8 | Plus |
Dper\GL17387-PA | 319 | GL17387-PA | 1..91 | 1..91 | 388 | 94.5 | Plus |
Dper\GL23722-PA | 334 | GL23722-PA | 20..291 | 90..354 | 168 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21392-PA | 388 | GA21392-PA | 1..388 | 1..388 | 1927 | 94.8 | Plus |
Dpse\GA11371-PA | 334 | GA11371-PA | 29..291 | 98..354 | 168 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20389-PA | 478 | GM20389-PA | 178..478 | 88..388 | 1583 | 98.3 | Plus |
Dsec\GM20389-PA | 478 | GM20389-PA | 1..116 | 1..106 | 489 | 83.6 | Plus |
Dsec\GM12822-PA | 335 | GM12822-PA | 29..305 | 98..380 | 195 | 27.6 | Plus |
Dsec\GM19048-PA | 330 | GM19048-PA | 11..236 | 69..273 | 160 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25863-PA | 242 | GD25863-PA | 1..242 | 147..388 | 1297 | 100 | Plus |
Dsim\GD21466-PA | 335 | GD21466-PA | 29..305 | 98..380 | 196 | 27.6 | Plus |
Dsim\GD16487-PA | 330 | GD16487-PA | 11..236 | 69..273 | 159 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21661-PA | 550 | GJ21661-PA | 1..311 | 1..311 | 1522 | 93.9 | Plus |
Dvir\GJ16995-PA | 324 | GJ16995-PA | 11..234 | 69..273 | 155 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21980-PA | 388 | GK21980-PA | 1..388 | 1..388 | 1905 | 92.8 | Plus |
Dwil\GK11925-PA | 329 | GK11925-PA | 29..216 | 98..281 | 165 | 28.9 | Plus |
Dwil\GK10120-PA | 344 | GK10120-PA | 21..249 | 69..273 | 156 | 27.6 | Plus |
Translation from 204 to 1370
> GH26015.hyp MQVFDNNMRRASRRASLRRGSISALPQKSHEIPWDIFERLFMPFLFCQAA AIVTSHLLHALDISSISTFAVFVWFALATVGAVLFYHFVKVSASGKGVLI TGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKLL HLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAHWIALGELEWIPFAV LRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCA TQAAVDCFAACLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQM WNQLSSEQKKTYGEDYYEAAMTSVEKYSRQAADIQPTLRVLIDAVTRTFP MARYTPVTSSERLQIFLAEHLAPSLYESLYGEQKKFVY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8888-PA | 388 | CG8888-PA | 1..388 | 1..388 | 1999 | 100 | Plus |
sro-PA | 335 | CG12068-PA | 29..305 | 98..380 | 195 | 27.6 | Plus |
CG13377-PB | 330 | CG13377-PB | 11..236 | 69..273 | 155 | 28.4 | Plus |
CG13377-PA | 330 | CG13377-PA | 11..236 | 69..273 | 155 | 28.4 | Plus |