BDGP Sequence Production Resources |
Search the DGRC for GH26062
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 260 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5946-RA |
Protein status: | GH26062.pep: gold |
Sequenced Size: | 1910 |
Gene | Date | Evidence |
---|---|---|
CG5946 | 2002-11-11 | Blastp of sequenced clone |
CG5946 | 2008-04-29 | Release 5.5 accounting |
CG5946 | 2008-08-15 | Release 5.9 accounting |
zetaCOP | 2008-08-15 | Release 5.9 accounting |
zetaCOP | 2008-12-18 | 5.12 accounting |
CG5946 | 2008-12-18 | 5.12 accounting |
1910 bp (1910 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001444
> GH26062.complete AAGACACGAAAACAAGTGAAGATGGACGGATTTATGATGGATATCATCAA GGGCATGTGCATCATGGACAACGATGGCAACCGCATCCTGGCCAAGTACT ACGACAAGAACATCCTGTCCACGTTGAAGGAGCAGAAGGCCTTCGAAAAG AATCTGTTCAATAAGACGCACCGCTCCAACACGGAGATCATTATGCTGGA CGGACTCACCTGCGTGTACAAGAGCAACGTGGACCTCTTCTTCTACGTGA TGGGCAACGCCTACGAGAACGAGCTCATCCTGCTGTCCGTGCTCAACTGC CTCTACGATTCCATTAGCCTGATCCTCAAGAAGAACGTTGAGAAGCGCCT GGTGCTGGAAAACCTGGAGATCATCATGCTGGCATTTGACGAGATCTGCG ACGGAGGCATTATTCTGGATGCGGATCCCTCGTCGGTGGTGAAACGCGTT GATCTGCGCAACGATGACATTCCCATTGCCGAACAGACCGTTGCCCAGGT TCTGCAATCGGCACGTGAACAACTCAAATGGTCCATTCTGAAGTGATGTG AAATGGGGTGGCGGAAGAGAGGAAGCCACTTCCGTGCCGCGTTGTCGCAA TACATTCGATTCTTCTTTTAGCGCCCACTTGTTTTCGCCTAGTTGTAAAG CATATAATAATACATACATTTAACTGGAAAAAAAAAAAAAAAAACTCGAG CGGTCGCACGTATTTGTTAACTTACGGAGTTCGGTGTGCAATTCAAATCG GAAATTAGCCAATTTTTAACAAGTGTTTTTGTTTTAATATGACGGAATTC GATTTTGTGCCACTCGCCGTGGGTGTGGTAGCCGTACTCGCCGGCGCCCT GATCGTCCACTATCTGCTGAATAAGAAGTCCACGAAACCACGCCGGGAAC CCAATCGCACCGCTCGGCTGCGCACACTTGTGGATCCCAATGACAAGTAC CTGCTGCCTCTCATCGAAAAGGAGAATCTGAGCCATGACACTAGGAGATT CCGGTTTGGATTGCCCTCCAAGCAGCATGTCCTTGGCCTGCCCGTTGGCC AGCACATTCATCTGATCGCCACCATCGACAATGAGCTAATAATTCGGCCA TACACTCCTATATCGTCTGATGAGGATGTGGGCTACGTGGACCTAGTCGT CAAGGTGTACTTCAAGGATTCGCATCCCAAGTTCCCGGCCGGCGGCAAAA TGACACAACACCTGGAGCAGCTCGAGTTGGGGGACAAGATCTCGTTCCGT GGTCCCTCGGGTAGGCTACAATATCTCGGCAATGGCACCTTCTCCATCAA AAAGTTGCGCAAGGATCCTCCAAAGCACGTGACCGCCAAGCGGGTCAACA TGATTGCCGGCGGCACTGGCATTACTCCAATGCTTCAATTGGCCAGGGAA GTTCTCAAGCGCAGCGATAAGGATAAGACTGAACTGGCGTTGCTGTTCGC CAATCAGAGCGAAAAGGACATTCTACTGCGTGCAGAGTTGGACGAACTGG CCCAGAAGCATCCTGACCAGTTCAAGATCTGGTACACAGTCGACAAGGCA AACGAAGGTTGGCAGTATAGCGTTGGCTTCATCAATGAGGAAATGATCGC CGCCCACCTGCTTCCGGCCAAGGACGATACCATTGTGTTGCTTTGCGGCC CACCACCAATGATTAACTTTGCCTGCAATCCGGCGCTGGACAAGCTTGGC TACCATCCGGACACCCGTTTTGCCTACTAATATGATGGACATTATGGGAC GAAATTGCATTTTCGTTGTGTTATATTCCTCTTTTTTTATCTGTTGTCTC TTACCAGCTCATCAAAATCCAAGAGTTCGCCAAGATTTCGGCAATGTGAT TGAAAACCAAGCGAATAAAAACATTAATTAGTTTAAAGTTTAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5946-RA | 1395 | CG5946-RA | 95..1289 | 700..1894 | 5960 | 99.9 | Plus |
CG5946-RF | 1437 | CG5946-RF | 348..1437 | 802..1891 | 5435 | 99.9 | Plus |
CG5946-RE | 2169 | CG5946-RE | 309..1066 | 802..1559 | 3775 | 99.8 | Plus |
CG5946-RE | 2169 | CG5946-RE | 1834..2169 | 1556..1891 | 1680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11809124..11809777 | 1457..804 | 3255 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 16662805..16663173 | 407..39 | 1845 | 100 | Minus |
chr3L | 24539361 | chr3L | 11807853..11808188 | 1891..1556 | 1665 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 16661411..16661592 | 678..497 | 910 | 100 | Minus |
chr3L | 24539361 | chr3L | 11808956..11809059 | 1559..1456 | 520 | 100 | Minus |
chr3L | 24539361 | chr3L | 11810690..11810793 | 803..700 | 505 | 99 | Minus |
chr3L | 24539361 | chr3L | 16662200..16662293 | 500..407 | 470 | 100 | Minus |
chr3L | 24539361 | chr3L | 16663229..16663268 | 40..1 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11818254..11818907 | 1457..804 | 3255 | 99.8 | Minus |
3L | 28110227 | 3L | 16673057..16673425 | 407..39 | 1845 | 100 | Minus |
3L | 28110227 | 3L | 11816980..11817318 | 1894..1556 | 1695 | 100 | Minus |
3L | 28110227 | 3L | 16671663..16671844 | 678..497 | 910 | 100 | Minus |
3L | 28110227 | 3L | 11818086..11818189 | 1559..1456 | 520 | 100 | Minus |
3L | 28110227 | 3L | 11819821..11819924 | 803..700 | 520 | 100 | Minus |
3L | 28110227 | 3L | 16672452..16672545 | 500..407 | 470 | 100 | Minus |
3L | 28110227 | 3L | 16673481..16673520 | 40..1 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11811354..11812007 | 1457..804 | 3255 | 99.8 | Minus |
3L | 28103327 | 3L | 16666157..16666525 | 407..39 | 1845 | 100 | Minus |
3L | 28103327 | 3L | 11810080..11810418 | 1894..1556 | 1695 | 100 | Minus |
3L | 28103327 | 3L | 16664763..16664944 | 678..497 | 910 | 100 | Minus |
3L | 28103327 | 3L | 11812921..11813024 | 803..700 | 520 | 100 | Minus |
3L | 28103327 | 3L | 11811186..11811289 | 1559..1456 | 520 | 100 | Minus |
3L | 28103327 | 3L | 16665552..16665645 | 500..407 | 470 | 100 | Minus |
3L | 28103327 | 3L | 16666581..16666620 | 40..1 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 1170..1215 | 649..694 | 122 | 73.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11807853..11808186 | 1558..1891 | 99 | <- | Minus |
chr3L | 11808958..11809057 | 1458..1557 | 100 | <- | Minus |
chr3L | 11809124..11809777 | 804..1457 | 99 | <- | Minus |
chr3L | 11810690..11810792 | 701..803 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 1..942 | 789..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 1..942 | 789..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 1..942 | 789..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 1..942 | 789..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 1..942 | 789..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 26..1210 | 700..1884 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 26..1217 | 700..1891 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 33..1224 | 700..1891 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 26..1210 | 700..1884 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5946-RA | 33..1224 | 700..1891 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11816983..11817316 | 1558..1891 | 100 | <- | Minus |
3L | 11818088..11818187 | 1458..1557 | 100 | <- | Minus |
3L | 11818254..11818907 | 804..1457 | 99 | <- | Minus |
3L | 11819821..11819926 | 694..803 | 96 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11816983..11817316 | 1558..1891 | 100 | <- | Minus |
3L | 11818088..11818187 | 1458..1557 | 100 | <- | Minus |
3L | 11818254..11818907 | 804..1457 | 99 | <- | Minus |
3L | 11819821..11819926 | 694..803 | 96 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11816983..11817316 | 1558..1891 | 100 | <- | Minus |
3L | 11818088..11818187 | 1458..1557 | 100 | <- | Minus |
3L | 11818254..11818907 | 804..1457 | 99 | <- | Minus |
3L | 11819821..11819926 | 694..803 | 96 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11810083..11810416 | 1558..1891 | 100 | <- | Minus |
arm_3L | 11811188..11811287 | 1458..1557 | 100 | <- | Minus |
arm_3L | 11811354..11812007 | 804..1457 | 99 | <- | Minus |
arm_3L | 11812921..11813026 | 694..803 | 96 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11810083..11810416 | 1558..1891 | 100 | <- | Minus |
3L | 11811188..11811287 | 1458..1557 | 100 | <- | Minus |
3L | 11811354..11812007 | 804..1457 | 99 | <- | Minus |
3L | 11812921..11813026 | 694..803 | 96 | -> | Minus |
Translation from 788 to 1729
> GH26062.pep MTEFDFVPLAVGVVAVLAGALIVHYLLNKKSTKPRREPNRTARLRTLVDP NDKYLLPLIEKENLSHDTRRFRFGLPSKQHVLGLPVGQHIHLIATIDNEL IIRPYTPISSDEDVGYVDLVVKVYFKDSHPKFPAGGKMTQHLEQLELGDK ISFRGPSGRLQYLGNGTFSIKKLRKDPPKHVTAKRVNMIAGGTGITPMLQ LAREVLKRSDKDKTELALLFANQSEKDILLRAELDELAQKHPDQFKIWYT VDKANEGWQYSVGFINEEMIAAHLLPAKDDTIVLLCGPPPMINFACNPAL DKLGYHPDTRFAY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25295-PA | 313 | GF25295-PA | 1..313 | 1..313 | 1522 | 93.9 | Plus |
Dana\GF12339-PA | 534 | GF12339-PA | 288..527 | 57..308 | 185 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12996-PA | 384 | GG12996-PA | 1..384 | 1..313 | 1512 | 77.9 | Plus |
Dere\GG21968-PA | 535 | GG21968-PA | 297..524 | 58..304 | 167 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14799-PA | 316 | GH14799-PA | 4..316 | 1..313 | 1477 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5946-PA | 313 | CG5946-PA | 1..313 | 1..313 | 1638 | 100 | Plus |
CG5946-PF | 316 | CG5946-PF | 4..316 | 1..313 | 1616 | 98.7 | Plus |
CG5946-PB | 316 | CG5946-PB | 4..316 | 1..313 | 1616 | 98.7 | Plus |
CG5946-PC | 313 | CG5946-PC | 1..313 | 1..313 | 1503 | 90.4 | Plus |
CG5946-PD | 316 | CG5946-PD | 4..316 | 1..313 | 1481 | 89.1 | Plus |
CG5946-PG | 330 | CG5946-PG | 4..330 | 1..313 | 1456 | 85.3 | Plus |
CG5946-PE | 263 | CG5946-PE | 4..260 | 1..257 | 1304 | 98.4 | Plus |
CG11257-PA | 535 | CG11257-PA | 297..509 | 58..288 | 171 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11853-PA | 316 | GI11853-PA | 4..316 | 1..313 | 1493 | 87.2 | Plus |
Dmoj\GI21190-PA | 528 | GI21190-PA | 255..522 | 23..308 | 165 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20725-PA | 316 | GL20725-PA | 4..316 | 1..313 | 1468 | 90.4 | Plus |
Dper\GL10825-PA | 536 | GL10825-PA | 283..529 | 43..308 | 174 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19251-PA | 316 | GA19251-PA | 4..316 | 1..313 | 1471 | 90.7 | Plus |
Dpse\GA10870-PA | 536 | GA10870-PA | 283..529 | 43..308 | 173 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24706-PA | 313 | GM24706-PA | 1..313 | 1..313 | 1655 | 98.7 | Plus |
Dsec\GM21957-PA | 535 | GM21957-PA | 297..509 | 58..288 | 173 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12773-PA | 316 | GD12773-PA | 4..316 | 1..313 | 1637 | 97.8 | Plus |
Dsim\GD11452-PA | 535 | GD11452-PA | 297..509 | 58..288 | 173 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13551-PA | 316 | GJ13551-PA | 4..316 | 1..313 | 1496 | 91.7 | Plus |
Translation from 788 to 1729
> GH26062.hyp MTEFDFVPLAVGVVAVLAGALIVHYLLNKKSTKPRREPNRTARLRTLVDP NDKYLLPLIEKENLSHDTRRFRFGLPSKQHVLGLPVGQHIHLIATIDNEL IIRPYTPISSDEDVGYVDLVVKVYFKDSHPKFPAGGKMTQHLEQLELGDK ISFRGPSGRLQYLGNGTFSIKKLRKDPPKHVTAKRVNMIAGGTGITPMLQ LAREVLKRSDKDKTELALLFANQSEKDILLRAELDELAQKHPDQFKIWYT VDKANEGWQYSVGFINEEMIAAHLLPAKDDTIVLLCGPPPMINFACNPAL DKLGYHPDTRFAY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5946-PA | 313 | CG5946-PA | 1..313 | 1..313 | 1638 | 100 | Plus |
CG5946-PF | 316 | CG5946-PF | 4..316 | 1..313 | 1616 | 98.7 | Plus |
CG5946-PB | 316 | CG5946-PB | 4..316 | 1..313 | 1616 | 98.7 | Plus |
CG5946-PC | 313 | CG5946-PC | 1..313 | 1..313 | 1503 | 90.4 | Plus |
CG5946-PD | 316 | CG5946-PD | 4..316 | 1..313 | 1481 | 89.1 | Plus |