Clone GH26069 Report

Search the DGRC for GH26069

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:260
Well:69
Vector:pOT2
Associated Gene/TranscriptCG8509-RA
Protein status:GH26069.pep: gold
Preliminary Size:1564
Sequenced Size:1418

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8509 2001-09-19 Blastp of sequenced clone
CG8509 2003-01-01 Sim4 clustering to Release 3
CG8509 2008-04-29 Release 5.5 accounting
CG8509 2008-08-15 Release 5.9 accounting
CG8509 2008-12-18 5.12 accounting

Clone Sequence Records

GH26069.complete Sequence

1418 bp (1418 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058461

> GH26069.complete
ATTTTTTTCGACACGAAAATACACATAAAATCATCAATTTGATACCATAA
TGAGCAACAAACTGGGCTATGATGTGACCGATCCCACTGTCCAATTGCTC
CGGGCATCGGCGTTCATGCAAAATGGGCCAGTGAAGCAGGTTCGCAGCCT
GGAGGATCTGGACCGCTGGGTTCGCTCGCAGGCATATTACGATATCATTG
CGTACATCAGCAACACCAGCAAGGCCATCCAGGGTCATCGTTTGACGCAG
ACCTTTCCGGTCACGGAGCAGATGCGTCGATTGAGCGAGATATTCGATGG
ACTGGATCACCTGATTGTCGAGCATACACCGAAAATTGAGGACTCGTATC
TGGCGTTACCGTTCGGCCAGGTTAGAAGCAAGGCCTATCGCACTTGGATG
CGAGAGATGTACCAGCATGTGTTTAGCAAACTGGACGAGGCCATCAATGT
GAACTGCAAGCACATCAACGAACTGGGACAATACCTTCGACGATCGTTTG
GTAATGGGAACACCCTGGATTTTGGTCCAGCCAACGAGTTGATGTTCCTT
TTCTTTCTCTGCGGCCTATTTCGCGCCGGTATCCTGTTGGCCAAGGATAC
GGTGGCCGCTGCACTGATGCTCTTCAATCGCTATGTGAATGTGGTTAGGC
GCCTGATAAGCACCTATGGACTGACCATTGCCAAGGATCCGGCGTGCACC
ATCGAAGACTACTACTTTTTGCCGTATCTATGGGGTGCGGCCCAGTTATC
GGTGGATTCTCCCTTCTCGCCGATGCAGTGTGAGCAGGGGAAGATAATGG
ATAATTATAGGCAGGACTTCATGATGCTGGAAATCATTGACCACCTGCAG
AAGACCCGCAGCGGTCCATTGAGTCGCGTGGCCCTGCAGCTGTGGAGCAT
CCTATCGATACCCACGTGGCCGCAGGTCTACAGGGGATTGGAGCGCAACT
ACATCGACCATGTGCTCTCCTCGTTCGGAACCGTGGAGCAAGCCATCTTC
TGCGAACTGATGTCCTTTGAGGCGGTTGTACCGATCATGCCTCTGCAACG
GGCACACTTGGGCACCCACTTAATAGTGGATGAGAAGGAGAACGAGGATG
AGCTCGAGCAGAAATATGGGGAAAATCGATGGTCGCTATCGCCACCGGTC
AGCAGATATGTCAGCATGGAACCGGAATCCTTTCTCGGCTTCCAGGCATC
CAAGACTCATAACAAATCGAAGGAGAGCGAGGATGAGCGGCTCTGGATGA
TGCGACAGCTGGTCGATGAGAACGATCCAAACTCCGACATGTTTTTTCCG
GATCGCGAAGTTAAAGGACGTGATTCGCTCACTTCGTTCGCCAACTAAGG
TCACTAAAATGTCAATCCAATTAATATATGTGAATTTCTGAGGAAAAAAA
AAAAAAAAAAAAAAAAAA

GH26069.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8509-RA 1393 CG8509-RA 1..1393 1..1393 6965 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15699412..15700804 1..1393 6965 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15809555..15810948 1..1394 6970 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15817653..15819046 1..1394 6970 100 Plus
Blast to na_te.dros performed on 2019-03-16 05:21:55 has no hits.

GH26069.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:22:49 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15699412..15700804 1..1393 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:56:47 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1299 50..1348 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:05:15 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1299 50..1348 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:35:50 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1299 50..1348 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:35:56 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1299 50..1348 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:01:37 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1299 50..1348 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:54:39 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:05:14 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:50 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:35:57 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:01:37 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8509-RA 1..1393 1..1393 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:22:49 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
X 15809555..15810947 1..1393 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:22:49 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
X 15809555..15810947 1..1393 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:22:49 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
X 15809555..15810947 1..1393 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:50 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15703588..15704980 1..1393 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:12:59 Download gff for GH26069.complete
Subject Subject Range Query Range Percent Splice Strand
X 15817653..15819045 1..1393 100   Plus

GH26069.pep Sequence

Translation from 49 to 1347

> GH26069.pep
MSNKLGYDVTDPTVQLLRASAFMQNGPVKQVRSLEDLDRWVRSQAYYDII
AYISNTSKAIQGHRLTQTFPVTEQMRRLSEIFDGLDHLIVEHTPKIEDSY
LALPFGQVRSKAYRTWMREMYQHVFSKLDEAINVNCKHINELGQYLRRSF
GNGNTLDFGPANELMFLFFLCGLFRAGILLAKDTVAAALMLFNRYVNVVR
RLISTYGLTIAKDPACTIEDYYFLPYLWGAAQLSVDSPFSPMQCEQGKIM
DNYRQDFMMLEIIDHLQKTRSGPLSRVALQLWSILSIPTWPQVYRGLERN
YIDHVLSSFGTVEQAIFCELMSFEAVVPIMPLQRAHLGTHLIVDEKENED
ELEQKYGENRWSLSPPVSRYVSMEPESFLGFQASKTHNKSKESEDERLWM
MRQLVDENDPNSDMFFPDREVKGRDSLTSFAN*

GH26069.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19862-PA 441 GF19862-PA 1..438 1..432 1508 65.3 Plus
Dana\GF14182-PA 408 GF14182-PA 16..321 28..338 590 38.7 Plus
Dana\GF18653-PA 408 GF18653-PA 13..338 18..338 561 35.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17918-PA 434 GG17918-PA 1..431 1..432 1812 75.5 Plus
Dere\GG24936-PA 398 GG24936-PA 16..321 28..338 578 39 Plus
Dere\GG10885-PA 533 GG10885-PA 11..320 18..324 575 37.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12521-PA 456 GH12521-PA 1..426 1..403 676 37.1 Plus
Dgri\GH10556-PA 404 GH10556-PA 17..314 29..338 582 38.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8509-PA 432 CG8509-PA 1..432 1..432 2266 100 Plus
Ptpa-PA 398 CG3289-PA 17..321 29..338 577 39.7 Plus
CG2104-PB 424 CG2104-PB 11..367 18..369 555 34.2 Plus
CG2104-PA 424 CG2104-PA 11..367 18..369 555 34.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14874-PA 499 GI14874-PA 1..433 1..382 758 40.2 Plus
Dmoj\GI16785-PA 408 GI16785-PA 17..321 29..338 591 39.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15320-PA 448 GL15320-PA 5..430 2..418 1235 55.5 Plus
Dper\GL23018-PA 414 GL23018-PA 28..344 26..339 612 37.5 Plus
Dper\GL18611-PA 406 GL18611-PA 16..321 28..338 576 37.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28794-PA 451 GA28794-PA 5..430 2..418 1241 55.7 Plus
Dpse\GA15244-PA 424 GA15244-PA 28..360 26..355 607 36 Plus
Dpse\GA17193-PA 385 GA17193-PA 16..300 28..338 494 35.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22587-PA 343 GM22587-PA 1..336 1..336 1726 94.3 Plus
Dsec\GM18413-PA 398 GM18413-PA 16..321 28..338 572 39.3 Plus
Dsec\GM10599-PA 460 GM10599-PA 11..334 18..338 555 35 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23225-PA 398 GD23225-PA 16..321 28..338 577 39.6 Plus
Dsim\GD19589-PA 426 GD19589-PA 11..334 18..338 564 35.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19538-PA 505 GJ19538-PA 1..353 1..338 791 46.2 Plus
Dvir\GJ17193-PA 424 GJ17193-PA 17..321 29..338 593 39.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25681-PA 536 GK25681-PA 27..416 29..395 770 41.6 Plus
Dwil\GK14079-PA 462 GK14079-PA 15..365 19..367 667 40.3 Plus
Dwil\GK15526-PA 411 GK15526-PA 15..319 29..338 613 40.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17226-PA 436 GE17226-PA 1..433 1..432 2017 86.1 Plus
Dyak\GE18228-PA 398 GE18228-PA 16..321 28..338 597 39.7 Plus
Dyak\GE24145-PA 425 GE24145-PA 11..335 18..339 564 35.7 Plus

GH26069.hyp Sequence

Translation from 49 to 1347

> GH26069.hyp
MSNKLGYDVTDPTVQLLRASAFMQNGPVKQVRSLEDLDRWVRSQAYYDII
AYISNTSKAIQGHRLTQTFPVTEQMRRLSEIFDGLDHLIVEHTPKIEDSY
LALPFGQVRSKAYRTWMREMYQHVFSKLDEAINVNCKHINELGQYLRRSF
GNGNTLDFGPANELMFLFFLCGLFRAGILLAKDTVAAALMLFNRYVNVVR
RLISTYGLTIAKDPACTIEDYYFLPYLWGAAQLSVDSPFSPMQCEQGKIM
DNYRQDFMMLEIIDHLQKTRSGPLSRVALQLWSILSIPTWPQVYRGLERN
YIDHVLSSFGTVEQAIFCELMSFEAVVPIMPLQRAHLGTHLIVDEKENED
ELEQKYGENRWSLSPPVSRYVSMEPESFLGFQASKTHNKSKESEDERLWM
MRQLVDENDPNSDMFFPDREVKGRDSLTSFAN*

GH26069.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG8509-PA 432 CG8509-PA 1..432 1..432 2266 100 Plus
Ptpa-PA 398 CG3289-PA 17..321 29..338 577 39.7 Plus
CG2104-PB 424 CG2104-PB 11..367 18..369 555 34.2 Plus
CG2104-PA 424 CG2104-PA 11..367 18..369 555 34.2 Plus