Clone GH26159 Report

Search the DGRC for GH26159

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:261
Well:59
Vector:pOT2
Associated Gene/TranscriptIris-RA
Protein status:GH26159.pep: gold
Preliminary Size:1824
Sequenced Size:1785

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4715 2001-01-01 Release 2 assignment
CG4715 2001-11-08 Blastp of sequenced clone
CG4715 2003-01-01 Sim4 clustering to Release 3
Iris 2008-04-29 Release 5.5 accounting
Iris 2008-08-15 Release 5.9 accounting
Iris 2008-12-18 5.12 accounting

Clone Sequence Records

GH26159.complete Sequence

1785 bp (1785 high quality bases) assembled on 2001-11-08

GenBank Submission: AY069209

> GH26159.complete
CAACGATCACCTCTACAAGCGAAAGATGAAAGCGATTAGTTTGGTATTCA
TCCTCGCCCCCTCGCTGATAGCGCTCTCCCATGGAAGCCCAGTTGATCGG
GAGGCGATCGGAGGTCCGATGGCGATGCGGGGATTCAACAACAGTCTGGG
CACCTTCGTGGAGTACAGCGGTCAGGCATCGCTAGCCTCCAGAGATTGGA
AGTTATGTGCCAGCTTCAACTTGGAGTCGCTTTATACGGCAATACGTGCG
TTCAATGGTGTCTACAAGGCTTTGGTCGATGTGTGCGATATCCAAAGGAA
TCTTTGTCCAGAAATTCTGGACATTACCAAGTTTGCGGATAGTATTCTTC
ACGATGGACTAATTGACTTGGAGAAAGCGTTGGACTTTAGGGCCGGACGA
CTTTCTTTGGGAGATGACGACGTGTCCATCGAGCTTGGGATGGGAACATC
CTGCATTGACAGCTCCATTAATGTTATAAATGTGATACTTCAAGAACCCT
TTCACGAGGCTTATGAACCTGAAAACCTGATTATGATGAAGCCGTATCTA
TACCTTATGGGCAGCAGACTAAAAAGTGCCCAGAATGCCATAACTGAAGC
CATAATCTCTGCCCACCACGGAAAGCTTAGTCCTCTTGTCCTTTCAATGA
AACAGCTGCAAGCGAAGATGCCGCCAATTCTGGGAGATCTGGATGGCCGA
TATACAATCCGGAATATTTACCTTCTCGCCTCCGTAGTTCCTCGGCAGCG
GGGCAACCACGTGGAGTTCCAAATCACAGTGCCCTTGCTCGATGCGGAGA
AGTTTAATATCTACCGATTGACGCCCATTCCACGGTTAAACAATGGCGTA
ATCCAACTGGTGGACACCGAAACACCTTATCTGGGCATCAACGATCATAT
GGACAGGTATTTTCCGCTTCAGAGCTTGGACGACTGCATCAAGTTGGGCG
AAGAAAGGTTCATCTGCAGGCGCAACCGCATTATCTACGGGACTGGGGAT
GACAGTTTTGCCTGCTCCCTGGCGGCCATACGGAACCAGTCTTCCGAAGT
CTGCACCTTGCGTCAAGTGAAGGAGAAGAGTCTGTGGACAGAGATGGTGG
CACCAAACTCCTGGATGGTGGCCCTTACCAATGAGCTAACTTTAATAGGA
GTGTGCTCCGGTGAGAGGCAGGAGCTCCAATTGAATGGCAGTGGAATCCT
GAGCATTCAAAGCGACTGTGCCGTGCGCAGTCCAGCTGTCGCCCTCCGTG
GAGAAGTCCGGGAAAGAGTTCCTTCGAAAGCAGGTTACGCAACGCTGCAG
AAGGAACCAAAATCTTCCCAGGAATCCGTGACCTTGGAATCATTTAATCA
ACTCCTGGCGATCGTGGGCAAACTGGAGCTGAATCAGAAAAAGCTGGAAG
CAGTCCGAGATTACCCAATGGTAGTCGTAGTAGTAGTAGCTGTGTGCGCA
GCCATATTGCTGGTCGCCTTACTTGTTTCGGCGACCTGGTTATATCGCAC
CCATCGGAGCAAACAACTTGCGCAGGCTCAAAATCTTGTCAACGAAGTCA
ATGGTCTCCAGGATCCACAGAATCGCACCACAACCTGCAATCTTCCGCTG
CTGGAAAAACATGAAATCTAAAAAAAAAAGAAGATGCGGCTGCGTGGTGC
ATCTGTTAAGTTCCGATGAAATTTCAAAGAGAGCTATGATTTTTTAACAA
TTTTTTGTGTCGATTATAATACAGTTTTATTTGTTTGGTTTGATTGCAAT
AAATATTAGTTACTCTCAAAAAAAAAAAAAAAAAA

GH26159.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
Iris-RA 1791 Iris-RA 23..1790 1..1768 8840 100 Plus
CG4552-RA 2795 CG4552-RA 2713..2795 1768..1686 415 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:43:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 1132204..1133962 1767..1 8530 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1132331..1134098 1768..1 8840 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1132331..1134098 1768..1 8840 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:43:48 has no hits.

GH26159.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:44:57 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 1132204..1133962 1..1767 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:57:00 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1596 26..1621 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:34:46 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1596 26..1621 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:59:24 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1596 26..1621 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:02:20 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1596 26..1621 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:44:56 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1596 26..1621 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:14:27 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 23..1789 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:34:46 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 23..1789 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:24 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1767 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:02:20 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 23..1789 1..1767 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:44:56 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
Iris-RA 1..1767 1..1767 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1132332..1134098 1..1767 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1132332..1134098 1..1767 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1132332..1134098 1..1767 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:24 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1132332..1134098 1..1767 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:39:21 Download gff for GH26159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1132332..1134098 1..1767 100   Minus

GH26159.hyp Sequence

Translation from 0 to 1620

> GH26159.hyp
NDHLYKRKMKAISLVFILAPSLIALSHGSPVDREAIGGPMAMRGFNNSLG
TFVEYSGQASLASRDWKLCASFNLESLYTAIRAFNGVYKALVDVCDIQRN
LCPEILDITKFADSILHDGLIDLEKALDFRAGRLSLGDDDVSIELGMGTS
CIDSSINVINVILQEPFHEAYEPENLIMMKPYLYLMGSRLKSAQNAITEA
IISAHHGKLSPLVLSMKQLQAKMPPILGDLDGRYTIRNIYLLASVVPRQR
GNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGVIQLVDTETPYLGINDHM
DRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAAIRNQSSEV
CTLRQVKEKSLWTEMVAPNSWMVALTNELTLIGVCSGERQELQLNGSGIL
SIQSDCAVRSPAVALRGEVRERVPSKAGYATLQKEPKSSQESVTLESFNQ
LLAIVGKLELNQKKLEAVRDYPMVVVVVVAVCAAILLVALLVSATWLYRT
HRSKQLAQAQNLVNEVNGLQDPQNRTTTCNLPLLEKHEI*

GH26159.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
Iris-PA 531 CG4715-PA 1..531 9..539 2699 100 Plus

GH26159.pep Sequence

Translation from 25 to 1620

> GH26159.pep
MKAISLVFILAPSLIALSHGSPVDREAIGGPMAMRGFNNSLGTFVEYSGQ
ASLASRDWKLCASFNLESLYTAIRAFNGVYKALVDVCDIQRNLCPEILDI
TKFADSILHDGLIDLEKALDFRAGRLSLGDDDVSIELGMGTSCIDSSINV
INVILQEPFHEAYEPENLIMMKPYLYLMGSRLKSAQNAITEAIISAHHGK
LSPLVLSMKQLQAKMPPILGDLDGRYTIRNIYLLASVVPRQRGNHVEFQI
TVPLLDAEKFNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS
LDDCIKLGEERFICRRNRIIYGTGDDSFACSLAAIRNQSSEVCTLRQVKE
KSLWTEMVAPNSWMVALTNELTLIGVCSGERQELQLNGSGILSIQSDCAV
RSPAVALRGEVRERVPSKAGYATLQKEPKSSQESVTLESFNQLLAIVGKL
ELNQKKLEAVRDYPMVVVVVVAVCAAILLVALLVSATWLYRTHRSKQLAQ
AQNLVNEVNGLQDPQNRTTTCNLPLLEKHEI*

GH26159.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14735-PA 510 GF14735-PA 5..506 31..528 928 40.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:28:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24612-PA 513 GG24612-PA 1..513 1..531 1829 69 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Iris-PA 531 CG4715-PA 1..531 1..531 2699 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:28:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15065-PA 524 GL15065-PA 1..523 1..531 770 34.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18379-PA 513 GA18379-PA 1..512 1..531 682 33.6 Plus
Dpse\GA29245-PA 490 GA29245-PA 129..377 180..422 245 24.6 Plus
Dpse\GA24234-PA 242 GA24234-PA 8..228 193..407 237 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16626-PA 527 GM16626-PA 1..526 1..530 2288 82.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22926-PA 528 GD22926-PA 1..527 1..530 2265 81.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15766-PA 532 GE15766-PA 1..526 1..529 1796 67 Plus