Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GH26159.complete Sequence
1785 bp (1785 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069209
> GH26159.complete
CAACGATCACCTCTACAAGCGAAAGATGAAAGCGATTAGTTTGGTATTCA
TCCTCGCCCCCTCGCTGATAGCGCTCTCCCATGGAAGCCCAGTTGATCGG
GAGGCGATCGGAGGTCCGATGGCGATGCGGGGATTCAACAACAGTCTGGG
CACCTTCGTGGAGTACAGCGGTCAGGCATCGCTAGCCTCCAGAGATTGGA
AGTTATGTGCCAGCTTCAACTTGGAGTCGCTTTATACGGCAATACGTGCG
TTCAATGGTGTCTACAAGGCTTTGGTCGATGTGTGCGATATCCAAAGGAA
TCTTTGTCCAGAAATTCTGGACATTACCAAGTTTGCGGATAGTATTCTTC
ACGATGGACTAATTGACTTGGAGAAAGCGTTGGACTTTAGGGCCGGACGA
CTTTCTTTGGGAGATGACGACGTGTCCATCGAGCTTGGGATGGGAACATC
CTGCATTGACAGCTCCATTAATGTTATAAATGTGATACTTCAAGAACCCT
TTCACGAGGCTTATGAACCTGAAAACCTGATTATGATGAAGCCGTATCTA
TACCTTATGGGCAGCAGACTAAAAAGTGCCCAGAATGCCATAACTGAAGC
CATAATCTCTGCCCACCACGGAAAGCTTAGTCCTCTTGTCCTTTCAATGA
AACAGCTGCAAGCGAAGATGCCGCCAATTCTGGGAGATCTGGATGGCCGA
TATACAATCCGGAATATTTACCTTCTCGCCTCCGTAGTTCCTCGGCAGCG
GGGCAACCACGTGGAGTTCCAAATCACAGTGCCCTTGCTCGATGCGGAGA
AGTTTAATATCTACCGATTGACGCCCATTCCACGGTTAAACAATGGCGTA
ATCCAACTGGTGGACACCGAAACACCTTATCTGGGCATCAACGATCATAT
GGACAGGTATTTTCCGCTTCAGAGCTTGGACGACTGCATCAAGTTGGGCG
AAGAAAGGTTCATCTGCAGGCGCAACCGCATTATCTACGGGACTGGGGAT
GACAGTTTTGCCTGCTCCCTGGCGGCCATACGGAACCAGTCTTCCGAAGT
CTGCACCTTGCGTCAAGTGAAGGAGAAGAGTCTGTGGACAGAGATGGTGG
CACCAAACTCCTGGATGGTGGCCCTTACCAATGAGCTAACTTTAATAGGA
GTGTGCTCCGGTGAGAGGCAGGAGCTCCAATTGAATGGCAGTGGAATCCT
GAGCATTCAAAGCGACTGTGCCGTGCGCAGTCCAGCTGTCGCCCTCCGTG
GAGAAGTCCGGGAAAGAGTTCCTTCGAAAGCAGGTTACGCAACGCTGCAG
AAGGAACCAAAATCTTCCCAGGAATCCGTGACCTTGGAATCATTTAATCA
ACTCCTGGCGATCGTGGGCAAACTGGAGCTGAATCAGAAAAAGCTGGAAG
CAGTCCGAGATTACCCAATGGTAGTCGTAGTAGTAGTAGCTGTGTGCGCA
GCCATATTGCTGGTCGCCTTACTTGTTTCGGCGACCTGGTTATATCGCAC
CCATCGGAGCAAACAACTTGCGCAGGCTCAAAATCTTGTCAACGAAGTCA
ATGGTCTCCAGGATCCACAGAATCGCACCACAACCTGCAATCTTCCGCTG
CTGGAAAAACATGAAATCTAAAAAAAAAAGAAGATGCGGCTGCGTGGTGC
ATCTGTTAAGTTCCGATGAAATTTCAAAGAGAGCTATGATTTTTTAACAA
TTTTTTGTGTCGATTATAATACAGTTTTATTTGTTTGGTTTGATTGCAAT
AAATATTAGTTACTCTCAAAAAAAAAAAAAAAAAA
GH26159.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Iris-RA | 1791 | Iris-RA | 23..1790 | 1..1768 | 8840 | 100 | Plus |
CG4552-RA | 2795 | CG4552-RA | 2713..2795 | 1768..1686 | 415 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:43:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 1132204..1133962 | 1767..1 | 8530 | 99 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:43:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1132331..1134098 | 1768..1 | 8840 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:26:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1132331..1134098 | 1768..1 | 8840 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:43:48 has no hits.
GH26159.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:44:57 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 1132204..1133962 | 1..1767 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:57:00 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1596 | 26..1621 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:34:46 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1596 | 26..1621 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:59:24 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1596 | 26..1621 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:02:20 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1596 | 26..1621 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:44:56 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1596 | 26..1621 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:14:27 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 23..1789 | 1..1767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:34:46 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 23..1789 | 1..1767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:24 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1767 | 1..1767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:02:20 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 23..1789 | 1..1767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:44:56 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Iris-RA | 1..1767 | 1..1767 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1132332..1134098 | 1..1767 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1132332..1134098 | 1..1767 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:44:57 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1132332..1134098 | 1..1767 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:24 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1132332..1134098 | 1..1767 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:39:21 Download gff for
GH26159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1132332..1134098 | 1..1767 | 100 | | Minus |
GH26159.hyp Sequence
Translation from 0 to 1620
> GH26159.hyp
NDHLYKRKMKAISLVFILAPSLIALSHGSPVDREAIGGPMAMRGFNNSLG
TFVEYSGQASLASRDWKLCASFNLESLYTAIRAFNGVYKALVDVCDIQRN
LCPEILDITKFADSILHDGLIDLEKALDFRAGRLSLGDDDVSIELGMGTS
CIDSSINVINVILQEPFHEAYEPENLIMMKPYLYLMGSRLKSAQNAITEA
IISAHHGKLSPLVLSMKQLQAKMPPILGDLDGRYTIRNIYLLASVVPRQR
GNHVEFQITVPLLDAEKFNIYRLTPIPRLNNGVIQLVDTETPYLGINDHM
DRYFPLQSLDDCIKLGEERFICRRNRIIYGTGDDSFACSLAAIRNQSSEV
CTLRQVKEKSLWTEMVAPNSWMVALTNELTLIGVCSGERQELQLNGSGIL
SIQSDCAVRSPAVALRGEVRERVPSKAGYATLQKEPKSSQESVTLESFNQ
LLAIVGKLELNQKKLEAVRDYPMVVVVVVAVCAAILLVALLVSATWLYRT
HRSKQLAQAQNLVNEVNGLQDPQNRTTTCNLPLLEKHEI*
GH26159.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:33:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Iris-PA | 531 | CG4715-PA | 1..531 | 9..539 | 2699 | 100 | Plus |
GH26159.pep Sequence
Translation from 25 to 1620
> GH26159.pep
MKAISLVFILAPSLIALSHGSPVDREAIGGPMAMRGFNNSLGTFVEYSGQ
ASLASRDWKLCASFNLESLYTAIRAFNGVYKALVDVCDIQRNLCPEILDI
TKFADSILHDGLIDLEKALDFRAGRLSLGDDDVSIELGMGTSCIDSSINV
INVILQEPFHEAYEPENLIMMKPYLYLMGSRLKSAQNAITEAIISAHHGK
LSPLVLSMKQLQAKMPPILGDLDGRYTIRNIYLLASVVPRQRGNHVEFQI
TVPLLDAEKFNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS
LDDCIKLGEERFICRRNRIIYGTGDDSFACSLAAIRNQSSEVCTLRQVKE
KSLWTEMVAPNSWMVALTNELTLIGVCSGERQELQLNGSGILSIQSDCAV
RSPAVALRGEVRERVPSKAGYATLQKEPKSSQESVTLESFNQLLAIVGKL
ELNQKKLEAVRDYPMVVVVVVAVCAAILLVALLVSATWLYRTHRSKQLAQ
AQNLVNEVNGLQDPQNRTTTCNLPLLEKHEI*
GH26159.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:28:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14735-PA | 510 | GF14735-PA | 5..506 | 31..528 | 928 | 40.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:28:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24612-PA | 513 | GG24612-PA | 1..513 | 1..531 | 1829 | 69 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Iris-PA | 531 | CG4715-PA | 1..531 | 1..531 | 2699 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:28:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL15065-PA | 524 | GL15065-PA | 1..523 | 1..531 | 770 | 34.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:28:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA18379-PA | 513 | GA18379-PA | 1..512 | 1..531 | 682 | 33.6 | Plus |
Dpse\GA29245-PA | 490 | GA29245-PA | 129..377 | 180..422 | 245 | 24.6 | Plus |
Dpse\GA24234-PA | 242 | GA24234-PA | 8..228 | 193..407 | 237 | 25.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:28:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16626-PA | 527 | GM16626-PA | 1..526 | 1..530 | 2288 | 82.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:28:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22926-PA | 528 | GD22926-PA | 1..527 | 1..530 | 2265 | 81.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:28:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15766-PA | 532 | GE15766-PA | 1..526 | 1..529 | 1796 | 67 | Plus |