BDGP Sequence Production Resources |
Search the DGRC for GH26186
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 261 |
Well: | 86 |
Vector: | pOT2 |
Associated Gene/Transcript | Timp-RB |
Protein status: | GH26186.pep: gold |
Preliminary Size: | 1590 |
Sequenced Size: | 1590 |
Gene | Date | Evidence |
---|---|---|
CG6281 | 2001-01-01 | Release 2 assignment |
CG6281 | 2001-11-08 | Blastp of sequenced clone |
CG6281 | 2003-01-01 | Sim4 clustering to Release 3 |
Timp | 2008-04-29 | Release 5.5 accounting |
Timp | 2008-08-15 | Release 5.9 accounting |
Timp | 2008-12-18 | 5.12 accounting |
1590 bp (1590 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069211
> GH26186.complete CGCAGCGAGCTAGAACGCCACAAAATCGGCGACGGAAAAATCGCGACATC GTACGAGATATATAGTACCAAGTAGTATAAAGTGCTGACGAGTCGAATCG AGTGCGAGTGCGAGTGCGAGTGCCGGTGAAAATACATTCAATTGTTTTTC CCGATTTTTGTGCCCTCGGGTTCAAGTGTTTAAAAGCCTGAAGTGCTAGT TTTACACACAAAATAGGTTGCAGCTTAAAGTAATCTCGGGGACTCACTGG CGGTGACGCAAAGCCATAGCCATTTTATCAGCTCGCCAACCAACGCAGTC ATGGATCTTAGAAAGCATTTGGGTTTATTGACGCTCCTCCTGGTCGCCGT TTTCGCGTTTTACGGTCGCCCAGCGGATGCCTGCAGCTGCATGCCATCTC ACCCACAGACGCACTTCGCCCAGGCGGACTACGTTGTGCAACTGCGAGTC CTTCGCAAATCGGATACCATCGAGCCCGGCAGGACCACCTACAAAGTTCA CATCAAACGCACCTACAAGGCTACATCCGAAGCACGACGAATGCTACGCG ATGGGCGCCTGTCCACGCCCCAAGATGACGCAATGTGTGGTATAAATCTC GATCTGGGAAAAGTTTATATAGTAGCGGGTAGGATGCCGACATTAAATAT ATGCAGCTACTACAAGGAGTACACCAGGATGACCATAACAGAGCGTCATG GCTTCAGCGGTGGATATGCCAAGGCCACCAATTGCACAGTAACTCCCTGC TTTGGAGAGAGATGCTTTAAGGGACGAAACTATGCCGATACATGCAAGTG GTCGCCTTTTGGAAAATGCGAGACGAACTACAGTGCCTGCATGCCGCATA AAGTGCAGACGGTCAATGGAGTGATTTCCCGATGCCGCTGGCGACGCACG CAGCTCTACAGAAAGTGCATGAGCAATCCGTAAACCAATGCGGGTTTTTT TTTTGCCCCAAGTCCTTCGCTTGTCCTTGTTATGCTACCGTTTTTCTCTA TCCAGAGCTTTAATACGTACGTTATGCCTAATGTGTTATTTAATAATTGA TGCTTTCGAACTTGTAACCGGCTCCTTAGTAGCTACTTAATTAGTGTCTA GCTTTTAATGTTCATACCGCGTATACTTACCAAATCGCGTGGATTGGGGA AGAAGGTCTGTTCGATCAGTGGAAAGCCGTCGCGTCCGAGGCGTCGCTGC AATTGCAGCAGGTGCGAAAATACCCAGGGCTTGTCCTTAAGAGTATCAAA GAAGATCAGTTGTAAAGTAAGCCCGATATGAAGTCCAACGCTACTCACCT GGAACTGATAGATAGAGTGCAGCGAATTAATGCTGGGCACTCCGCCGTAC TTTAAACCCAAGATCGTGGAACGATAGTCACTGGATCCGTCGCGCGGCGG CTGACGAATGAGCACAAAGTCCGGGCGGAAGGAACGTGCCACCTGTTTTG GTGTGATATTCCAAAAAGAAAATAAATTTTATGATAAAAAGAAAATTTAC GTAGCTGTTAGATTGCCAATCTCTGGCAACACTTTTGTAATTTTTAAACA CGAAAAATATATTTAAAAACAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Timp-RB | 1635 | Timp-RB | 64..1635 | 1..1572 | 7860 | 100 | Plus |
Timp.a | 1367 | Timp.a | 20..1367 | 225..1572 | 6725 | 99.9 | Plus |
Timp-RA | 1498 | Timp-RA | 64..1345 | 1..1282 | 6410 | 100 | Plus |
Timp-RA | 1498 | Timp-RA | 1346..1498 | 1420..1572 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6029616..6030450 | 1572..739 | 4095 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 6038491..6038720 | 230..1 | 1135 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 6030505..6030733 | 742..514 | 1115 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 6030992..6031200 | 433..225 | 1015 | 99 | Minus |
chr3R | 27901430 | chr3R | 6030834..6030921 | 520..433 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10203873..10204708 | 1574..739 | 4180 | 100 | Minus |
3R | 32079331 | 3R | 10212759..10212988 | 230..1 | 1150 | 100 | Minus |
3R | 32079331 | 3R | 10204763..10204991 | 742..514 | 1130 | 99.6 | Minus |
3R | 32079331 | 3R | 10205250..10205458 | 433..225 | 1030 | 99.5 | Minus |
3R | 32079331 | 3R | 10205092..10205179 | 520..433 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9944704..9945539 | 1574..739 | 4180 | 100 | Minus |
3R | 31820162 | 3R | 9953590..9953819 | 230..1 | 1150 | 100 | Minus |
3R | 31820162 | 3R | 9945594..9945822 | 742..514 | 1130 | 99.5 | Minus |
3R | 31820162 | 3R | 9946081..9946289 | 433..225 | 1030 | 99.5 | Minus |
3R | 31820162 | 3R | 9945923..9946010 | 520..433 | 440 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6029616..6030450 | 739..1572 | 99 | <- | Minus |
chr3R | 6030509..6030727 | 520..738 | 99 | <- | Minus |
chr3R | 6030835..6030920 | 434..519 | 100 | <- | Minus |
chr3R | 6030992..6031194 | 231..433 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..633 | 301..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..633 | 301..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..633 | 301..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..633 | 301..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..633 | 301..933 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..1572 | 1..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..1572 | 1..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 20..1591 | 1..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 1..1572 | 1..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Timp-RB | 20..1591 | 1..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10212759..10212988 | 1..230 | 100 | Minus | |
3R | 10205250..10205452 | 231..433 | 100 | <- | Minus |
3R | 10203875..10204708 | 739..1572 | 100 | <- | Minus |
3R | 10204767..10204985 | 520..738 | 100 | <- | Minus |
3R | 10205093..10205178 | 434..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10212759..10212988 | 1..230 | 100 | Minus | |
3R | 10205250..10205452 | 231..433 | 100 | <- | Minus |
3R | 10203875..10204708 | 739..1572 | 100 | <- | Minus |
3R | 10204767..10204985 | 520..738 | 100 | <- | Minus |
3R | 10205093..10205178 | 434..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10212759..10212988 | 1..230 | 100 | Minus | |
3R | 10205250..10205452 | 231..433 | 100 | <- | Minus |
3R | 10203875..10204708 | 739..1572 | 100 | <- | Minus |
3R | 10204767..10204985 | 520..738 | 100 | <- | Minus |
3R | 10205093..10205178 | 434..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6029597..6030430 | 739..1572 | 100 | <- | Minus |
arm_3R | 6030489..6030707 | 520..738 | 100 | <- | Minus |
arm_3R | 6030815..6030900 | 434..519 | 100 | <- | Minus |
arm_3R | 6030972..6031174 | 231..433 | 100 | <- | Minus |
arm_3R | 6038481..6038710 | 1..230 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9946081..9946283 | 231..433 | 100 | <- | Minus |
3R | 9953590..9953819 | 1..230 | 100 | Minus | |
3R | 9944706..9945539 | 739..1572 | 100 | <- | Minus |
3R | 9945598..9945816 | 520..738 | 100 | <- | Minus |
3R | 9945924..9946009 | 434..519 | 100 | <- | Minus |
Translation from 300 to 932
> GH26186.pep MDLRKHLGLLTLLLVAVFAFYGRPADACSCMPSHPQTHFAQADYVVQLRV LRKSDTIEPGRTTYKVHIKRTYKATSEARRMLRDGRLSTPQDDAMCGINL DLGKVYIVAGRMPTLNICSYYKEYTRMTITERHGFSGGYAKATNCTVTPC FGERCFKGRNYADTCKWSPFGKCETNYSACMPHKVQTVNGVISRCRWRRT QLYRKCMSNP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17533-PA | 210 | GF17533-PA | 1..210 | 1..210 | 945 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17294-PA | 210 | GG17294-PA | 1..209 | 1..209 | 868 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18457-PA | 210 | GH18457-PA | 1..210 | 1..210 | 864 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Timp-PB | 210 | CG6281-PB | 1..210 | 1..210 | 1150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24034-PA | 210 | GI24034-PA | 1..210 | 1..210 | 668 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23838-PA | 210 | GL23838-PA | 1..210 | 1..210 | 888 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19485-PA | 210 | GA19485-PA | 1..210 | 1..210 | 892 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26178-PA | 249 | GM26178-PA | 1..191 | 1..193 | 890 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20727-PA | 210 | GD20727-PA | 1..210 | 1..210 | 1113 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23665-PA | 210 | GJ23665-PA | 1..210 | 1..210 | 822 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22534-PA | 210 | GK22534-PA | 1..210 | 1..210 | 776 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24695-PA | 211 | GE24695-PA | 1..211 | 1..210 | 995 | 90.5 | Plus |
Translation from 300 to 932
> GH26186.hyp MDLRKHLGLLTLLLVAVFAFYGRPADACSCMPSHPQTHFAQADYVVQLRV LRKSDTIEPGRTTYKVHIKRTYKATSEARRMLRDGRLSTPQDDAMCGINL DLGKVYIVAGRMPTLNICSYYKEYTRMTITERHGFSGGYAKATNCTVTPC FGERCFKGRNYADTCKWSPFGKCETNYSACMPHKVQTVNGVISRCRWRRT QLYRKCMSNP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Timp-PB | 210 | CG6281-PB | 1..210 | 1..210 | 1150 | 100 | Plus |