GH26265.complete Sequence
997 bp (997 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069215
> GH26265.complete
CACAGTTTGGACACTTATATTACCAAAATTTCTGTTAAAATTATTTGATA
AAAAATTATTCAGTTCAATCATGTTCAAAGTGCGCAGCTTGGCGCTCATG
AAATTGAGTGAAGGCGTTTTCGGCGCACGACTAATGGCCAAATCGCCGAA
GGATTCGGGCAAGGATTCTTGCAAGGGTGCCGATTCCAAAAAGAAGAAAG
ACAAAAAGAAGAAGGATATGTGTGGCAGAACTGTTGTTCCCACTTCACCA
CGTTGCAAAAACAAACCCGGCGGCTCAGACAAATCCAAAGATGAGTGCAA
GAAAAAGTAGCAGAGTTCGAATAAATCATTTCAGCCCCTTAAACAAAATC
ACAGCAGGCCTTTAAACAAACTTCAAGCTGCTTTGGCCTAAGTCAAAATT
AAAGTTACAAAAGAAAAAAAAAACCATGTCCCGACTTTTGCTGCAGTGCC
GCAGAACTTTGCTGATCCTTCGCCATCAAACGGCGGTGGAAAATGAGAAA
GGACTCTTTGGCAAACTGCTGGGAAAGTGCCAGTCCTTTGGCAAGGATGA
AAAGGATCTTGGCCAGCAGGAGGAGGAGGAATCAAAGAGATCTTAGTTAG
GAAATTCAAATGTCTGCAGCTAAAGAAGCTACCCCGTTCCCATTGAAGAT
CATATAATGGGCAGCAAATTACCATATTGTTGCCGGAGATCCCAGATGAA
TCGGGTCCATTTTATGGGCAGCTCATAAAACGGATCGTGCACAGACATTA
TAAAGCCATAAAGCATCAACTAAAATCGGTCAAAAATAGCTTTGGAGGGG
CACAGGCGATGGCCAGACTTAGACAAGTGATACAACATCCATTTCCCTGG
TCGGTTTACGATGTCTGAAAATGCCAGGCATCGAAATTCGACGGCGAAGG
GCAGAATGACCAGCAGCGAGATGTATCTAAATTTGAAGCGAACCAAATTG
TTAGATAAAAGCAATTGTTTCTCACTGAAAAAAAAAAAAAAAAAAAA
GH26265.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32388-RA | 1064 | CG32388-RA | 76..1053 | 1..979 | 4840 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:38:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 6976160..6976540 | 612..231 | 1800 | 98.7 | Minus |
chr3L | 24539361 | chr3L | 6975734..6976099 | 977..612 | 1770 | 98.9 | Minus |
chr3L | 24539361 | chr3L | 6976605..6976834 | 230..1 | 1030 | 96.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:37:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6983899..6984279 | 612..231 | 1860 | 99.7 | Minus |
3L | 28110227 | 3L | 6983471..6983838 | 979..612 | 1825 | 99.7 | Minus |
3L | 28110227 | 3L | 6984343..6984572 | 230..1 | 1150 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:21:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 6976999..6977379 | 612..231 | 1870 | 99.7 | Minus |
3L | 28103327 | 3L | 6976571..6976938 | 979..612 | 1825 | 99.7 | Minus |
3L | 28103327 | 3L | 6977443..6977672 | 230..1 | 1150 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 06:37:59 has no hits.
GH26265.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:38:53 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 6975734..6976098 | 613..977 | 98 | <- | Minus |
chr3L | 6976160..6976540 | 231..612 | 98 | <- | Minus |
chr3L | 6976605..6976834 | 1..230 | 96 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:57:10 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..240 | 71..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:27:17 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..240 | 71..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:24 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..240 | 71..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:54:50 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..240 | 71..310 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:22:02 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..240 | 71..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:04:04 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..976 | 1..977 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:27:17 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..976 | 1..977 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:24 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 15..990 | 1..977 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:54:51 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 1..976 | 1..977 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:22:02 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32388-RA | 15..990 | 1..977 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6983473..6983837 | 613..977 | 99 | <- | Minus |
3L | 6983899..6984279 | 231..612 | 99 | <- | Minus |
3L | 6984343..6984572 | 1..230 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6983473..6983837 | 613..977 | 99 | <- | Minus |
3L | 6983899..6984279 | 231..612 | 99 | <- | Minus |
3L | 6984343..6984572 | 1..230 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6983473..6983837 | 613..977 | 99 | <- | Minus |
3L | 6983899..6984279 | 231..612 | 99 | <- | Minus |
3L | 6984343..6984572 | 1..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:24 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6976573..6976937 | 613..977 | 99 | <- | Minus |
arm_3L | 6976999..6977379 | 231..612 | 99 | <- | Minus |
arm_3L | 6977443..6977672 | 1..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:30:52 Download gff for
GH26265.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6976573..6976937 | 613..977 | 99 | <- | Minus |
3L | 6976999..6977379 | 231..612 | 99 | <- | Minus |
3L | 6977443..6977672 | 1..230 | 100 | | Minus |
GH26265.hyp Sequence
Translation from 0 to 309
> GH26265.hyp
TVWTLILPKFLLKLFDKKLFSSIMFKVRSLALMKLSEGVFGARLMAKSPK
DSGKDSCKGADSKKKKDKKKKDMCGRTVVPTSPRCKNKPGGSDKSKDECK
KK*
GH26265.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:34:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32388-PA | 79 | CG32388-PA | 1..79 | 24..102 | 415 | 100 | Plus |
GH26265.pep Sequence
Translation from 70 to 309
> GH26265.pep
MFKVRSLALMKLSEGVFGARLMAKSPKDSGKDSCKGADSKKKKDKKKKDM
CGRTVVPTSPRCKNKPGGSDKSKDECKKK*
GH26265.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:25:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15009-PA | 83 | GG15009-PA | 1..83 | 1..78 | 223 | 71.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32388-PA | 79 | CG32388-PA | 1..79 | 1..79 | 415 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:25:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13798-PA | 79 | GM13798-PA | 1..79 | 1..79 | 317 | 94.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:25:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13097-PA | 79 | GD13097-PA | 1..79 | 1..79 | 317 | 94.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:25:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20452-PA | 82 | GE20452-PA | 1..68 | 1..68 | 230 | 83.8 | Plus |