Clone GH26265 Report

Search the DGRC for GH26265

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:262
Well:65
Vector:pOT2
Associated Gene/TranscriptCG32388-RA
Protein status:GH26265.pep: gold
Preliminary Size:1117
Sequenced Size:997

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32388 2001-11-29 Blastp of sequenced clone
CG32388 2003-01-01 Sim4 clustering to Release 3
CG32388 2008-04-29 Release 5.5 accounting
CG32388 2008-08-15 Release 5.9 accounting
CG32388 2008-12-18 5.12 accounting

Clone Sequence Records

GH26265.complete Sequence

997 bp (997 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069215

> GH26265.complete
CACAGTTTGGACACTTATATTACCAAAATTTCTGTTAAAATTATTTGATA
AAAAATTATTCAGTTCAATCATGTTCAAAGTGCGCAGCTTGGCGCTCATG
AAATTGAGTGAAGGCGTTTTCGGCGCACGACTAATGGCCAAATCGCCGAA
GGATTCGGGCAAGGATTCTTGCAAGGGTGCCGATTCCAAAAAGAAGAAAG
ACAAAAAGAAGAAGGATATGTGTGGCAGAACTGTTGTTCCCACTTCACCA
CGTTGCAAAAACAAACCCGGCGGCTCAGACAAATCCAAAGATGAGTGCAA
GAAAAAGTAGCAGAGTTCGAATAAATCATTTCAGCCCCTTAAACAAAATC
ACAGCAGGCCTTTAAACAAACTTCAAGCTGCTTTGGCCTAAGTCAAAATT
AAAGTTACAAAAGAAAAAAAAAACCATGTCCCGACTTTTGCTGCAGTGCC
GCAGAACTTTGCTGATCCTTCGCCATCAAACGGCGGTGGAAAATGAGAAA
GGACTCTTTGGCAAACTGCTGGGAAAGTGCCAGTCCTTTGGCAAGGATGA
AAAGGATCTTGGCCAGCAGGAGGAGGAGGAATCAAAGAGATCTTAGTTAG
GAAATTCAAATGTCTGCAGCTAAAGAAGCTACCCCGTTCCCATTGAAGAT
CATATAATGGGCAGCAAATTACCATATTGTTGCCGGAGATCCCAGATGAA
TCGGGTCCATTTTATGGGCAGCTCATAAAACGGATCGTGCACAGACATTA
TAAAGCCATAAAGCATCAACTAAAATCGGTCAAAAATAGCTTTGGAGGGG
CACAGGCGATGGCCAGACTTAGACAAGTGATACAACATCCATTTCCCTGG
TCGGTTTACGATGTCTGAAAATGCCAGGCATCGAAATTCGACGGCGAAGG
GCAGAATGACCAGCAGCGAGATGTATCTAAATTTGAAGCGAACCAAATTG
TTAGATAAAAGCAATTGTTTCTCACTGAAAAAAAAAAAAAAAAAAAA

GH26265.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:55:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32388-RA 1064 CG32388-RA 76..1053 1..979 4840 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6976160..6976540 612..231 1800 98.7 Minus
chr3L 24539361 chr3L 6975734..6976099 977..612 1770 98.9 Minus
chr3L 24539361 chr3L 6976605..6976834 230..1 1030 96.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:08:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:37:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6983899..6984279 612..231 1860 99.7 Minus
3L 28110227 3L 6983471..6983838 979..612 1825 99.7 Minus
3L 28110227 3L 6984343..6984572 230..1 1150 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6976999..6977379 612..231 1870 99.7 Minus
3L 28103327 3L 6976571..6976938 979..612 1825 99.7 Minus
3L 28103327 3L 6977443..6977672 230..1 1150 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:37:59 has no hits.

GH26265.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:38:53 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6975734..6976098 613..977 98 <- Minus
chr3L 6976160..6976540 231..612 98 <- Minus
chr3L 6976605..6976834 1..230 96   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:57:10 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..240 71..310 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:27:17 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..240 71..310 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:24 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..240 71..310 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:54:50 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..240 71..310 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:22:02 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..240 71..310 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:04:04 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..976 1..977 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:27:17 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..976 1..977 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:24 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 15..990 1..977 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:54:51 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 1..976 1..977 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:22:02 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 15..990 1..977 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6983473..6983837 613..977 99 <- Minus
3L 6983899..6984279 231..612 99 <- Minus
3L 6984343..6984572 1..230 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6983473..6983837 613..977 99 <- Minus
3L 6983899..6984279 231..612 99 <- Minus
3L 6984343..6984572 1..230 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:53 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6983473..6983837 613..977 99 <- Minus
3L 6983899..6984279 231..612 99 <- Minus
3L 6984343..6984572 1..230 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:24 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6976573..6976937 613..977 99 <- Minus
arm_3L 6976999..6977379 231..612 99 <- Minus
arm_3L 6977443..6977672 1..230 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:30:52 Download gff for GH26265.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6976573..6976937 613..977 99 <- Minus
3L 6976999..6977379 231..612 99 <- Minus
3L 6977443..6977672 1..230 100   Minus

GH26265.hyp Sequence

Translation from 0 to 309

> GH26265.hyp
TVWTLILPKFLLKLFDKKLFSSIMFKVRSLALMKLSEGVFGARLMAKSPK
DSGKDSCKGADSKKKKDKKKKDMCGRTVVPTSPRCKNKPGGSDKSKDECK
KK*

GH26265.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32388-PA 79 CG32388-PA 1..79 24..102 415 100 Plus

GH26265.pep Sequence

Translation from 70 to 309

> GH26265.pep
MFKVRSLALMKLSEGVFGARLMAKSPKDSGKDSCKGADSKKKKDKKKKDM
CGRTVVPTSPRCKNKPGGSDKSKDECKKK*

GH26265.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15009-PA 83 GG15009-PA 1..83 1..78 223 71.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG32388-PA 79 CG32388-PA 1..79 1..79 415 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13798-PA 79 GM13798-PA 1..79 1..79 317 94.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13097-PA 79 GD13097-PA 1..79 1..79 317 94.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20452-PA 82 GE20452-PA 1..68 1..68 230 83.8 Plus